Assignment of non-informative turkey genetic markers through comparative approaches

Cytogenetic and Genome Research

Volumn 109, Issue 4, 2005, Pages 527-532

  Reed, K M ^a   Holm, J ^a   Morisson, M ^b   Leroux, S ^b   Vignal, A ^b  

^a UNIVERSITY OF MINNESOTA   (United States)

^b CEMAGREF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHICKEN; COMPARATIVE GENE MAPPING; COMPUTER MODEL; GENE ASSIGNMENT; GENE MAPPING; GENETIC LINKAGE; GENETIC MARKER; GENOME ANALYSIS; GENOTYPE; HYBRID CELL; MICROSATELLITE MARKER; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE TAGGED SITE; UNINDEXED SEQUENCE;

ANIMALS; CHROMOSOME MAPPING; GENETIC MARKERS; TURKEYS;

MELEAGRIS GALLOPAVO;

EID: 20944443814     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000084214     Document Type: Article

References (26)

1. Altschul SF, Madden TL, Schäffe AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402 (1997).
2. Boehnke M, Lange K, Cox DR: Statistical methods for multipoint radiation hybrid mapping. Am J Hum Genet 49:1174-1188 (1991).
3. Crittenden LB, Provencher L, Levin I, Abplanalp H, Briles RW, Briles WE, Dodgson JB: Characterization of a red jungle fowl by white leghorn backcross reference population for molecular mapping of the chicken genome. Poult Sci 72:334-348 (1993).
4. Dranchak P, Chaves LD, Rowe JA, Reed KM: Turkey microsatellite loci from an embryonic cDNA library. Poult Sci 82:526-531 (2003).
5. Farber CR, Medrano JF: Putative in silico mapping of DNA sequences to livestock genome maps using SSLP flanking sequences. Anim Genet 34:11-18 (2003).
6. Farber CR, Medrano JF: Identification of putative homology between horse microsatellite flanking sequences and cross-species ESTs, mRNAs and genomic sequences. Anim Genet 35:28-33 (2004).
7. Groenen MA, Cheng HH, Bumstead N, Benkel B, Briles E, Burt DW, Burke T, Crittenden LB, Dodgson J, Hillel J, Lamont S, Ponce de Leon FA, Soller M, Takahashi H, Vignal A: A consensus linkage map of the chicken genome. Genome Res 10:137-147 (2000).
8. Harry DE, Marini PJ, Zaitlin D, Reed KM: A first generation map of the turkey genome. Genome 46:914-924 (2003).
9. Hawken RJ, Murtaugh J, Flickinger GH, Yerle M, Robic A, Milan D, Gellin J, Beattie CW, Schook LB, Alexander LJ: A first-generation porcine whole-genome radiation hybrid map. Mamm Genome 10:824-830 (1999).
10. Jennen DGJ, Crooijmans MA, Morisson M, Grootemaat AE, van der der Poel JJ, Vignal A, Groenen MA: A radiation hybrid map of chicken chromosome 15. Anim Genet 35:63-65 (2004).
11. Knutson TP, Chaves LD, Hall MK, Reed KM: One hundred fifty four genetic markers for the turkey (Meleagris gallopavo). Genome 47:1015-1028 (2004).
12. Krause E, Morrison L, Reed KM, Alexander LJ: Radiation hybrid mapping of 273 previously unreported porcine microsatellites. Anim Genet 33:477-485 (2002).
13. Lunetta KL, Boehnke M: Multipoint radiation hybrid mapping: comparison of methods, sample size requirements and optimal study characteristics. Genomics 21:92-103 (1994).
14. Morisson M, Jiguet-Jiglaire C, Leroux S, Faraut T, Bardes S, Fève K, Genet C, Pitel F, Milan D, Vignal A: Development of a gene-based radiation hybrid map of chicken chromosome 7 and comparison to human and mouse. Mamm Genome 15:732-739 (2004).
15. Morisson M, Lemière A, Bosc S, Galan M, Plisson-Petit FP, Pinton P, Delcros C, Fève K, Pitel F, Fillon V, Yerle M, Vignal A: ChickRH6: a chicken whole-genome radiation hybrid panel. Genet Sel Evol 34:521-533 (2002).
16. Reed KM, Mendoza KM, Beattie CW: Comparative analysis of microsatellite loci in chicken and turkey. Genome 43:796-802 (2000a).
17. Reed KM, Roberts MC, Murtaugh J, Beattie CW, Alexander LJ: Eight new dinucleotide microsatellite markers in turkey (Meleagris gallopavo). Anim Genet 31:140 (2000b).
18. Reed KM, Mendoza KM, Beattie CW: Development of 90 new bovine microsatellite loci. Animal Biotech 12:69-76 (2001).
19. Reed KM, Chaves LD, Rowe JA: Twelve new turkey microsatellite markers. Poult Sci 81:1789-1791 (2002).
20. Reed KM, Chaves LD, Garbe JR, Da Y, Harry DE: Allelic variation and genetic linkage of avian microsatellites in a new turkey population for genetic mapping. Cytogenet Genome Res 102:331-339 (2003a).
21. Reed KM, Chaves LD, Hall MK, Knutson TP, Rowe JA, Torgerson AJ: Microsatellite loci for genetic mapping in the turkey (Meleagris gallopavo). Animal Biotech 14:119-131 (2003b).
22. Schmid M, Nanda I, Guttenbach M, Steinlein C, Hoehn M, Schartl M, Haaf T, et al: First report on chicken genes and chromosomes 2000. Cytogenet Cell Genet 90:169-218 (2000).
23. Schook LB, Wheeler MB: The University of Illinois Meishan x Yorkshire swine family. J Anim Sci 7:1920 (1994).
24. Shibusawa M, Nishibori M, Nishida-Umehara C, Tsudzuki M, Masabanda J, Griffin DK, Matsuda Y: Karyotypic evolution in the Galliformes: An examination of the process of karyotypic evolution by comparison of the molecular cytogenetic findings with the molecular phylogeny. Cytogenet Genome Res 106:111-119 (2004).
25. Wagner ML, Goh G, Wu JT, Raudsepp T, Morisson LY, Alexander LJ, Skow LS, Chowdhary BP, Mickelson JR: Radiation hybrid mapping of 75 previously unreported equine microsatellite loci. Anim Genet 35:68-71 (2004).
26. Yerle M, Pinton P, Delcros C, Arnal N, Milan D, Robic A: Generation and characterization of a 12,000-rad radiation hybrid panel for fine mapping in pig. Cytogenet Genome Res 97:219-228 (2002).