Robust method for proteome analysis by MS/MS using an entire translated genome: Demonstration on the ciliome of Tetrahymena thermophila

Journal of Proteome Research

Volumn 4, Issue 3, 2005, Pages 909-919

  Smith, Jeffrey C ^a   Northey, Julian G B ^b   Garg, Jyoti ^a   Pearlman, Ronald E ^a   Siu, K W Michael ^a  

^a YORK UNIVERSITY   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

Author keywords

223 cilia proteins; BLAST analysis; Entire unannotated genome sequence translation; Multiple peptide matches; Shotgun proteomic analysis; Tetrahymena thermophila cilia

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; EUKARYOTIC FLAGELLUM; GENE SEQUENCE; GENOME; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEOMICS; RNA TRANSLATION; SEQUENCE HOMOLOGY; TANDEM MASS SPECTROMETRY; TETRAHYMENA THERMOPHILA;

AMINO ACID SEQUENCE; ANIMALS; CILIA; COMPUTATIONAL BIOLOGY; GENOME, PROTOZOAN; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PROTEOME; PROTEOMICS; PROTOZOAN PROTEINS; TETRAHYMENA THERMOPHILA;

EUKARYOTA; TETRAHYMENA THERMOPHILA;

EID: 20844459102     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr050013h     Document Type: Article

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