Characterization of the tufB-secE-nusG-rplKAJL-rpoB gene cluster of the citrus greening organism and detection by loop-mediated isothermal amplification

Plant Disease

Volumn 89, Issue 7, 2005, Pages 705-711

  Okuda, Mitsuru ^a   Matsumoto, Mitsuhito ^a   Tanaka, Yuko ^a   Subandiyah, Siti ^b   Iwanami, Toru ^a  

^a NATIONAL AGRICULTURAL RESEARCH CENTER FOR KYUSHU OKINAWA REGION   (Japan)

^b GADJAH MADA UNIVERSITY   (Indonesia)

Author keywords

Diaphorina citri; Quantitative PCR

Indexed keywords

DISEASES; ELECTROPHORESIS; ENZYMES; GENES; MICROORGANISMS; NYLON POLYMERS; POLYMERIC MEMBRANES;

CITRUS GREENING ORGANISMS; GENE CLUSTER; NYLON MEMBRANES; THERMAL CYCLER;

PLANTS (BOTANY);

CITRUS; DISEASES; GENES; MEMBRANES; MICROORGANISMS; NYLON;

EID: 20644450783     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PD-89-0705     Document Type: Article

References (15)

1. An, G., and Friesen, J. D. 1980. The nucleotide sequence of tufB and four nearby tRNA structure genes of Escherichia coli. Genes 12:33-39.
2. da Graca, J. V. 1991. Citrus greening disease. Annu. Rev. Phytopathol. 29:109-136.
3. Downing, W. L., Sullivan, S. L., Gottesman, M. E., and Dennis, E. 1990. Sequence and transcriptional pattern of the essential E. coli secE-nusG operon. J. Bacteriol. 172:1621-1627.
4. Jagoueix, S., Bové, J. M., and Garnier, M. 1994. The phloem-limited bacterium of greening disease of citrus is a member of the α-subdivision of the Protobacteria. Int. J. Syst. Bacteriol. 44:379-386.
5. Jagoueix, S., Bové, J. M., and Garnier, M. 1996. PCR detection of the two 'Candidatus' liberobacter species associated with greening disease of citrus. Mol. Cell. Probes 10:43-50.
6. Jagoueix, S., Bové, J. M., and Garnier, M. 1997. Comparison of the 16S/23S ribosomal intergenic regions of "Candidatus Liberobacter asiaticum" and "Candidatus liberobacter africanum," the two species associated with citrus Huanglongbing (greening) disease. Int. J. Syst. Bacteriol. 47:224-227.
7. Liu, Y. G., and Whittier, R. F. 1995. Thermal asymmetric interlaced PCR: Automable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. Genomics 25:674-681.
8. Miyakawa, T., and Tsuno, K. 1989. Occurrence of citrus greening in the southern islands of Japan. Ann. Phytopathol. Soc. Jpn. 66:667-670.
9. Miyatake, Y. 1965. Notes on the Psllidae from the Ryukyu islands. Konchu 33:171-189.
10. Murray, M. G., and Thompson, W. F. 1980. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 8:4321-4325.
11. Notomi, T., Okayama, H., Masubuchi, H., Yonekawa, T., Watanabe, K., Amino, N., and Hase, T. 2000. Loop-medidated isothermal amplification of DNA. Nucleic Acids Res. 28:e63.
12. Planet, P., Jagoueix, S., Bove, J. M., and Garnier, M. 1995. Detection and characterization of the African citrus greening Liberobacter by amplification, cloning, and sequencing of the rplKAJL-rpoBC operon. Curr. Microbiol. 30:137-141.
13. Sanger, F., Nicklen, S., and Coulson, A. R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
14. Subandiyah, S., Iwanami, T., Kondo, Y., Kobayashi, M., Tsuyumu, S., and Ieki, H. 2000. Comparison of 16S rDNA and 16S/23S intergenie region sequences among citrus greening organisms in Asia. Plant Dis. 84:15-18.
15. Villechanoux, S., Garnier, M., Laigret, F., Renaudin, J., and Bové, J. M. 1993. The genome of the non-cultured, bacterial-like organism associated with citrus greening disease contains the nusG-rplKAJL-rpoB gene cluster and the gene for a bacteriophage type DNA polymerase. Curr. Microbiol. 26:161-166.