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Volumn 21, Issue 1, 2005, Pages 135-144

Construction and characterization of different MutS fusion proteins as recognition elements of DNA chip for detection of DNA mutations

Author keywords

DNA chip; Mutation detection; MutS fusion proteins

Indexed keywords

CHROMATOGRAPHY; DNA; MUTAGENS; SYNTHESIS (CHEMICAL);

EID: 20444494264     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bios.2004.08.045     Document Type: Article
Times cited : (6)

References (40)
  • 1
    • 0035282888 scopus 로고    scopus 로고
    • PCR candidate region mismatch scanning: Adaptation to quantitative, high-throughput genotyping
    • M. Beaulieu, G.P. Larson, L. Geller, S.D. Flanagan, and T.G. Krontiris PCR candidate region mismatch scanning: adaptation to quantitative, high-throughput genotyping Nucleic Acids Res. 1 2001 1114 1124
    • (2001) Nucleic Acids Res. , vol.1 , pp. 1114-1124
    • Beaulieu, M.1    Larson, G.P.2    Geller, L.3    Flanagan, S.D.4    Krontiris, T.G.5
  • 2
    • 0037099076 scopus 로고    scopus 로고
    • Rapid parallel mutation scanning of gene fragments using a microelectronic protein-DNA chip format
    • H.A. Behrensdorf, M. Pignot, N. Windhab, and A. Kappel Rapid parallel mutation scanning of gene fragments using a microelectronic protein-DNA chip format Nucleic Acids Res. 15 2002 e64
    • (2002) Nucleic Acids Res. , vol.15 , pp. 64
    • Behrensdorf, H.A.1    Pignot, M.2    Windhab, N.3    Kappel, A.4
  • 3
    • 0038185363 scopus 로고    scopus 로고
    • Mutations in the O-mannosyltransferase gene POMT1 give rise to the severe neuronal migration disorder Walker-Warburg syndrome
    • D. Beltran-Valero De Bernabe, and S. Currier Mutations in the O-mannosyltransferase gene POMT1 give rise to the severe neuronal migration disorder Walker-Warburg syndrome J. Hum. Genet. 71 5 2002 1033 1043
    • (2002) J. Hum. Genet. , vol.71 , Issue.5 , pp. 1033-1043
    • Beltran-Valero De Bernabe, D.1    Currier, S.2
  • 5
    • 0031291660 scopus 로고    scopus 로고
    • Comparison of enzyme mismatch cleavage and chemical cleavage of mismatch on a defined set of heteroduplexes
    • V.J. Deeble, E. Roberts, M.D. Robinson, C.G. Woods, D.T. Bishop, and G.R. Taylor Comparison of enzyme mismatch cleavage and chemical cleavage of mismatch on a defined set of heteroduplexes Genet. Testing 1 1999 253 259
    • (1999) Genet. Testing , vol.1 , pp. 253-259
    • Deeble, V.J.1    Roberts, E.2    Robinson, M.D.3    Woods, C.G.4    Bishop, D.T.5    Taylor, G.R.6
  • 6
    • 0029125891 scopus 로고
    • Versatile E. coli thioredoxin specific monoclonal antibodies afford convenient analysis and purification of prokaryote expressed soluble fusion protein
    • R.R. Dickason, R.A. Edwards, J. Bryan, and D.P. Huston Versatile E. coli thioredoxin specific monoclonal antibodies afford convenient analysis and purification of prokaryote expressed soluble fusion protein J. Immunol. Methods 185 1995 237 244
    • (1995) J. Immunol. Methods , vol.185 , pp. 237-244
    • Dickason, R.R.1    Edwards, R.A.2    Bryan, J.3    Huston, D.P.4
  • 7
    • 0028334278 scopus 로고
    • MutS binding protects heteroduplex DNA from exonuclease digestion in vitro: A simple method for detecting mutations
    • L.A. Ellis, G.R. Taylor, R. Banks, and S. Baumberg MutS binding protects heteroduplex DNA from exonuclease digestion in vitro: a simple method for detecting mutations Nucleic Acids Res. 11 1994 2710 2711
    • (1994) Nucleic Acids Res. , vol.11 , pp. 2710-2711
    • Ellis, L.A.1    Taylor, G.R.2    Banks, R.3    Baumberg, S.4
  • 8
    • 0030273635 scopus 로고    scopus 로고
    • A biotinylated MutS fusion protein and its use in a rapid mutation screening technique
    • D.H. Geschwind, R. Rhee, and S.F. Nelson A biotinylated MutS fusion protein and its use in a rapid mutation screening technique Genet. Anal. 13 1996 105 111
    • (1996) Genet. Anal. , vol.13 , pp. 105-111
    • Geschwind, D.H.1    Rhee, R.2    Nelson, S.F.3
  • 9
    • 0030804560 scopus 로고    scopus 로고
    • Rapid method for detection of point mutations using mismatch binding protein (MutS) and an optical biosensor
    • M. Gotoh, M. Hasebe, T. Ohira, Y. Hasegawa, Y. Shinohara, H. Sota, J. Nakao, and M. Tosu Rapid method for detection of point mutations using mismatch binding protein (MutS) and an optical biosensor Genet. Anal. 14 1997 47 50
    • (1997) Genet. Anal. , vol.14 , pp. 47-50
    • Gotoh, M.1    Hasebe, M.2    Ohira, T.3    Hasegawa, Y.4    Shinohara, Y.5    Sota, H.6    Nakao, J.7    Tosu, M.8
  • 10
    • 0031088328 scopus 로고    scopus 로고
    • Gene diagnosis with an affinity sensor, BIACORE-principle and applications
    • M. Gotoh, M. Hasebe, T. Ohira, and M. Tosu Gene diagnosis with an affinity sensor, BIACORE-principle and applications Rinsho Byori 45 1997 224 228
    • (1997) Rinsho Byori , vol.45 , pp. 224-228
    • Gotoh, M.1    Hasebe, M.2    Ohira, T.3    Tosu, M.4
  • 11
    • 0034673362 scopus 로고    scopus 로고
    • Genome-wide detection of unknown subtle mutations in bacteria by combination of MutS and RDA
    • K. Gotoh, M. Hata, M. Miyajima, and H. Yokota Genome-wide detection of unknown subtle mutations in bacteria by combination of MutS and RDA Biochem. Biophys. Res. Commun. 16 2000 535 540
    • (2000) Biochem. Biophys. Res. Commun. , vol.16 , pp. 535-540
    • Gotoh, K.1    Hata, M.2    Miyajima, M.3    Yokota, H.4
  • 12
    • 0027215944 scopus 로고
    • A simple method for identification of point mutations using denaturing gradient gel electrophoresis
    • P. Guldberg, and F. Guttler A simple method for identification of point mutations using denaturing gradient gel electrophoresis Nucleic Acids Res. 21 1993 2261 2262
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2261-2262
    • Guldberg, P.1    Guttler, F.2
  • 13
    • 0344528731 scopus 로고    scopus 로고
    • Molecular markers demonstrate that the first described multidrug-resistant Mycobacterium bovis outbreak was due to Mycobacterium tuberculosis
    • M.C. Gutierrez, J.C. Galan, J. Blazquez, E. Bouvet, and V. Vincent Molecular markers demonstrate that the first described multidrug-resistant Mycobacterium bovis outbreak was due to Mycobacterium tuberculosis J. Clin. Microbiol. 37 4 1999 971 975
    • (1999) J. Clin. Microbiol. , vol.37 , Issue.4 , pp. 971-975
    • Gutierrez, M.C.1    Galan, J.C.2    Blazquez, J.3    Bouvet, E.4    Vincent, V.5
  • 14
    • 84984934752 scopus 로고    scopus 로고
    • Resequencing and mutational analysis using oligonucleotide microarrays
    • J.G. Hacia Resequencing and mutational analysis using oligonucleotide microarrays Nat. Genet. 21 1999 42 47
    • (1999) Nat. Genet. , vol.21 , pp. 42-47
    • Hacia, J.G.1
  • 16
    • 0036843702 scopus 로고    scopus 로고
    • The K-Cl cotransporter KCC3 is mutant in a severe peripheral neuropathy associated with agenesis of the corpus callosum
    • H.C. Howard, and D.B. Mount The K-Cl cotransporter KCC3 is mutant in a severe peripheral neuropathy associated with agenesis of the corpus callosum Nat. Genet. 32 3 2002 384 392
    • (2002) Nat. Genet. , vol.32 , Issue.3 , pp. 384-392
    • Howard, H.C.1    Mount, D.B.2
  • 17
    • 0024297120 scopus 로고
    • Mismatch-containing oligonucleotide duplexes bound by the E. coli mutS-encoded protein
    • J. Jiricny, S.S. Su, S.G. Wood, and P. Modrich Mismatch-containing oligonucleotide duplexes bound by the E. coli mutS-encoded protein Nucleic Acids Res. 25 1988 7843 7853
    • (1988) Nucleic Acids Res. , vol.25 , pp. 7843-7853
    • Jiricny, J.1    Su, S.S.2    Wood, S.G.3    Modrich, P.4
  • 18
    • 0034641947 scopus 로고    scopus 로고
    • The crystal structure of DNA mismatch repair protein MutS binding to a G × T mismatch
    • M.H. Lamers, A. Perrakis, J.H. Enzlin, H.H. Winterwerp, N. de Wind, and T.K. Sixma The crystal structure of DNA mismatch repair protein MutS binding to a G × T mismatch Nature 407 2000 711 717
    • (2000) Nature , vol.407 , pp. 711-717
    • Lamers, M.H.1    Perrakis, A.2    Enzlin, J.H.3    Winterwerp, H.H.4    De Wind, N.5    Sixma, T.K.6
  • 19
    • 0023448889 scopus 로고
    • Bacterial genes mutL, mutS, and dcm participate in repair of mismatches at 5-methylcytosine sites
    • M. Lieb Bacterial genes mutL, mutS, and dcm participate in repair of mismatches at 5-methylcytosine sites J. Bacteriol. 169 1987 5241 5246
    • (1987) J. Bacteriol. , vol.169 , pp. 5241-5246
    • Lieb, M.1
  • 20
    • 0028298034 scopus 로고
    • Mutation detection by mismatch binding protein, MutS, in amplified DNA: Application to the cystic fibrosis gene
    • A. Lishanski, E.A. Ostrander, and J. Rine Mutation detection by mismatch binding protein, MutS, in amplified DNA: application to the cystic fibrosis gene Proc. Natl. Acad. Sci. U.S.A. 91 1994 2674 2678
    • (1994) Proc. Natl. Acad. Sci. U.S.A. , vol.91 , pp. 2674-2678
    • Lishanski, A.1    Ostrander, E.A.2    Rine, J.3
  • 21
    • 0020807940 scopus 로고
    • Methyl-directed repair of DNA base-pair mismatches in vitro
    • A.L. Lu, S. Clark, and P. Modrich Methyl-directed repair of DNA base-pair mismatches in vitro Proc. Natl. Acad. Sci. U.S.A. 80 1983 4639 4643
    • (1983) Proc. Natl. Acad. Sci. U.S.A. , vol.80 , pp. 4639-4643
    • Lu, A.L.1    Clark, S.2    Modrich, P.3
  • 23
    • 0036820789 scopus 로고    scopus 로고
    • A novel mutation in the IHH gene causes brachydactyly type A1: A 95-year-old mystery resolved
    • M.E. McCready, and E. Sweeney A novel mutation in the IHH gene causes brachydactyly type A1: a 95-year-old mystery resolved Hum. Genet. 111 2002 368 375
    • (2002) Hum. Genet. , vol.111 , pp. 368-375
    • McCready, M.E.1    Sweeney, E.2
  • 25
    • 0026355962 scopus 로고
    • Mechanisms and biological effects of mismatch repair
    • P. Modrich Mechanisms and biological effects of mismatch repair Annu. Rev. Genet. 25 1991 229 253
    • (1991) Annu. Rev. Genet. , vol.25 , pp. 229-253
    • Modrich, P.1
  • 26
    • 0030941659 scopus 로고    scopus 로고
    • Evaluation of MutS as a tool for direct measurement of point mutations in genomic DNA
    • B.L. Parsons, and R.H. Heflich Evaluation of MutS as a tool for direct measurement of point mutations in genomic DNA Mutat. Res. 21 1997 277 285
    • (1997) Mutat. Res. , vol.21 , pp. 277-285
    • Parsons, B.L.1    Heflich, R.H.2
  • 27
    • 0031744328 scopus 로고    scopus 로고
    • Detection of basepair substitution mutation at a frequency of 1 × 10 (-7) by combining two genotypic selection methods, MutEx enrichment and allele-specific competitive blocker PCR
    • B.L. Parsons, and R.H. Heflich Detection of basepair substitution mutation at a frequency of 1 × 10 (-7) by combining two genotypic selection methods, MutEx enrichment and allele-specific competitive blocker PCR Environ. Mol. Mutagen. 32 1998 200 211
    • (1998) Environ. Mol. Mutagen. , vol.32 , pp. 200-211
    • Parsons, B.L.1    Heflich, R.H.2
  • 28
    • 0034654676 scopus 로고    scopus 로고
    • One tube mutation detection using sensitive fluorescent dyeing of MutS protected DNA
    • P. Sachadyn, A. Stanisawska, and J. Kur One tube mutation detection using sensitive fluorescent dyeing of MutS protected DNA Nucleic Acids Res. 15 2000 E36
    • (2000) Nucleic Acids Res. , vol.15 , pp. 36
    • Sachadyn, P.1    Stanisawska, A.2    Kur, J.3
  • 29
    • 0022372670 scopus 로고
    • Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia
    • R.H. Saiki, and S. Sharf Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia Science 230 1985 1350 1354
    • (1985) Science , vol.230 , pp. 1350-1354
    • Saiki, R.H.1    Sharf, S.2
  • 30
    • 0037018901 scopus 로고    scopus 로고
    • Escherichia coli genes involved in resistance to pyrazinoic acid, the active component of the tuberculosis drug pyrazinamide
    • A. Schaller, M. Guo, O. Gisanrin, and Y. Zhang Escherichia coli genes involved in resistance to pyrazinoic acid, the active component of the tuberculosis drug pyrazinamide FEMS Microbiol. Lett. 4 2002 265 270
    • (2002) FEMS Microbiol. Lett. , vol.4 , pp. 265-270
    • Schaller, A.1    Guo, M.2    Gisanrin, O.3    Zhang, Y.4
  • 31
    • 0033656598 scopus 로고    scopus 로고
    • Anchor-chain molecular system for orientation control in enzyme immobilization
    • W.H. Shao, X.E. Zhang, H. Liu, Z.P. Zhang, and A.E. Cass Anchor-chain molecular system for orientation control in enzyme immobilization Bioconjug. Chem. 11 2000 822 826
    • (2000) Bioconjug. Chem. , vol.11 , pp. 822-826
    • Shao, W.H.1    Zhang, X.E.2    Liu, H.3    Zhang, Z.P.4    Cass, A.E.5
  • 32
    • 0029913452 scopus 로고    scopus 로고
    • Mutation detection with MutH, MutL, and MutS mismatch repair proteins
    • J. Smith, and P. Modrich Mutation detection with MutH, MutL, and MutS mismatch repair proteins Proc. Natl. Acad. Sci. U.S.A. 30 1996 4374 4379
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.30 , pp. 4374-4379
    • Smith, J.1    Modrich, P.2
  • 33
    • 0001320568 scopus 로고    scopus 로고
    • MutS-mediated detection of DNA mismatches using atomic force microscopy
    • H.B. Sun, and H. Yokota MutS-mediated detection of DNA mismatches using atomic force microscopy Anal. Chem. 15 2000 3138 3141
    • (2000) Anal. Chem. , vol.15 , pp. 3138-3141
    • Sun, H.B.1    Yokota, H.2
  • 35
    • 0347128041 scopus 로고    scopus 로고
    • Detection of point mutation and insertion mutations in DNA using a quartz crystal microbalance and MutS, a mismatch binding protein
    • X. Su, R. Robelek, Y. Wu, G. Wang, and W. Knoll Detection of point mutation and insertion mutations in DNA using a quartz crystal microbalance and MutS, a mismatch binding protein Anal. Chem. 15 2004 489 494
    • (2004) Anal. Chem. , vol.15 , pp. 489-494
    • Su, X.1    Robelek, R.2    Wu, Y.3    Wang, G.4    Knoll, W.5
  • 36
    • 0034186474 scopus 로고    scopus 로고
    • Detection and mapping of mismatched base pairs in DNA molecules by atomic force microscopy
    • M. Tanigawa, M. Gotoh, M. Machida, T. Okada, and M. Oishi Detection and mapping of mismatched base pairs in DNA molecules by atomic force microscopy Nucleic Acids Res. 1 2000 E38
    • (2000) Nucleic Acids Res. , vol.1 , pp. 38
    • Tanigawa, M.1    Gotoh, M.2    MacHida, M.3    Okada, T.4    Oishi, M.5
  • 37
    • 0033656505 scopus 로고    scopus 로고
    • The use of immobilized mismatch binding protein in mutation/SNP detection
    • R. Wagner, and A. Dean The use of immobilized mismatch binding protein in mutation/SNP detection Methods Mol. Biol. 152 2000 159 168
    • (2000) Methods Mol. Biol. , vol.152 , pp. 159-168
    • Wagner, R.1    Dean, A.2
  • 38
    • 0028871390 scopus 로고
    • Mutation detection using immobilized mismatch binding protein (MutS)
    • R. Wagner, P. Debbie, and M. Radman Mutation detection using immobilized mismatch binding protein (MutS) Nucleic Acids Res. 11 1995 3944 3948
    • (1995) Nucleic Acids Res. , vol.11 , pp. 3944-3948
    • Wagner, R.1    Debbie, P.2    Radman, M.3
  • 39
    • 0023601968 scopus 로고
    • Characterization of beta-thalassaemia mutations using direct genomic sequencing of amplified single copy DNA
    • C. Wong, and C.E. Dowling Characterization of beta-thalassaemia mutations using direct genomic sequencing of amplified single copy DNA Nature 330 1987 384 386
    • (1987) Nature , vol.330 , pp. 384-386
    • Wong, C.1    Dowling, C.E.2
  • 40
    • 0035210221 scopus 로고    scopus 로고
    • Construction of a fusion enzyme system by gene splicing as a new molecular recognition element for a sequence biosensor
    • Y.F. Zhou, X.E. Zhang, H. Liu, Z.P. Zhang, C.G. Zhang, and A.E. Cass Construction of a fusion enzyme system by gene splicing as a new molecular recognition element for a sequence biosensor Bioconjug. Chem. 12 2001 924 931
    • (2001) Bioconjug. Chem. , vol.12 , pp. 924-931
    • Zhou, Y.F.1    Zhang, X.E.2    Liu, H.3    Zhang, Z.P.4    Zhang, C.G.5    Cass, A.E.6


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