A molecular analysis of some Eastern Atlantic grouper from the Epinephelus and Mycteroperca genus

Journal of Experimental Marine Biology and Ecology

Volumn 321, Issue 1, 2005, Pages 83-92

  Maggio, T ^a   Andaloro, F ^b   Hemida, F ^c   Arculeo, M ^a  

^a UNIVERSITY OF PALERMO   (Italy)

^b ICRAM   (Italy)

^c UNIVERSITY OF SCIENCES AND TECHNOLOGY HOUARI BOUMEDIENE   (Algeria)

Author keywords

16S rDNA; cyt b; Epinephelus; Mycteroperca; Phylogenetic analyses

Indexed keywords

DIVERGENCE; MOLECULAR ANALYSIS; PHYLOGENETICS;

EPINEPHELINAE; EPINEPHELUS; EPINEPHELUS AENEUS; EPINEPHELUS CANINUS; EPINEPHELUS COSTAE; EPINEPHELUS HAIFENSIS; EPINEPHELUS MARGINATUS; EPINEPHELUS TAUVINA; MYA; MYCTEROPERCA; MYCTEROPERCA FUSCA; MYCTEROPERCA RUBRA;

EID: 20444409506     PISSN: 00220981     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jembe.2005.01.004     Document Type: Article

References (45)

1. G. Allegrucci, A. Caccone, and V. Sbordoni Cytochrome b sequence divergence in the European sea bass (Dicentrarchus labrax) and phylogenetic relationship among some Perciformes species J. Zool. Syst. Evol. Res. 37 1999 149 156
2. M. Arculeo, A. Mauro, S. Lo Brutto, M. Cammarata, and N. Parrinello Protein differences among the mediterranean species of Spicara J. Fish Biol. 49 1996 1371 1372
3. C.C. Baldwin Morphology of the larvae of the American Anthininae (Teleostei: Serranidae), with comments on relationships within the subfamily Copeia 4 1990 913 954
4. C.C. Baldwin, and G.D. Johnson Phylogeny of the Epinepheline (Teleostei: Serranidae) Bull. Mar. Sci. 52 1993 240 283
5. A. Ben-Tuvia, and A. Lourie A red sea grouper E. tauvina caught on the Mediterranean coast of Israel Israel J. Zool. 18 1969 245 247
6. L.S. Berg System der rezenten und fossilen Fischartigen und Fische 1958 VEB Verlag der Wissenschaften Berlin
7. L. Bermingham, and H. Lessios Rate variation of protein and mtDNA evolution as revealed by sea urchins separated by Isthmus of Panama Proc. Natl. Acad. Sci. USA 90 1993 2734 2738
8. E. Bermingham, S.S. McCafferty, and A.P. Martin Fish biogeography and molecular clock T.D. Kocher C.A. Stepien Molecular Systematics of Fishes 1997 Academic Press New York 113 128
9. V.J. Birstein, and R. Desalle Molecular phylogeny of Acipenserinae Mol. Phyl. Evol. 9 1998 141 155
10. M.E. Bloch Naturgeschichte der ausländischen Fische Berlin. Naturg. Ausl. Fische 1793 (i-xiv + 1-144)
11. W.M. Browen, E.M. Prager, A. Wang, and A.C. Wilson Mithocondrial DNA sequences of primates: tempo and mode of evolution J. Mol. Evol. 18 1982 225 239
12. P. Cantatore, M. Roberti, G. Pesole, A. Ludovico, F. Milella, M.N. Gadaleta, and G. Saccore Evolutionary analysis of cytochrome b sequence in some Perciformes: evidence for a slower rate of evolution than in mammals J. Mol. Evol. 39 1994 589 597
13. S. Chow, and H. Kishino Phylogenetic relationships between tuna species of the genus Thunnus (Scombridae, Teleostei): incosistent implications from morphology, nuclear and mitocondrial genomes J. Mol. Evol. 41 1995 741 748
14. M.T. Craig, D.J. Pondella II, J.P.C. Franck, and J.C. Hafner On the status of the Serranid fish genus epinephelus: evidence for paraphyly based upon 16S rDNA sequence Mol. Phylogenet. Evol. 19 1 2001 121 130
15. R. De La Herran, C. Ruiz Rejon, M. Ruiz Rejon, and M.A. Garrido-Ramos The molecular phylogeny of the Sparidae species (Pieces, Perciformes) based on two satellite DNA families Heredity 87 2001 691 697
16. ECNC, 1998. Convention on the conservation of European wild-life and natural habitats. European Treaty Series 104.
17. T.N. Gill Remarks on the relations of the genera and other groups of Cuban fishes Proc. Acad. Natl. Sci. 1862 235 242
18. D. Golani, L. Orsi-Relini, E. Massuti, and S.P. Quignard Atlas of Exotic Species in the Mediterranean-Fishes 2002 Ciesm Publishers Monaco 254 pp.
19. P.C. Heemstra A taxonomic revision of the eastern Atlantic groupers (Pisces: Serranidae) Bol. Mus. Munic. Funchal. 43 226 1991 5 71
20. P.C. Heemstra, and D. Golani Clarification of the Indo-Pacific groupers (Pisces: Serranidae) in the Mediterranean sea Israel J. Zool. 39 1993 381 390
21. P.C. Heemstra, and J.E. Randall Grouper of the world FAO Fish. Synop. 125 (16) 1993 104 276
22. D.M. Irwin, T.D. Kocher, and A.C. Wilson Evolution of the cytochrome b in mammals J. Mol. Evol. 32 1991 128 144
23. D.S. Jordan, and C.H. Eigenmann A review of the genera and species of Serranidae found in the waters of America and Europe Bull. U.S. Fish Comm. 8 1888 329 441 pls. 60-69
24. M. Kochzius, R. Soller, M.A. Khalaf, and D. Blohm Molecular phylogeny of the lionfish genera Dendrochirus and Pterois (Scorpaenidae, Pteroinae) based on mitochondrial DNA sequences Mol. Phylogenet. Evol. 28 2003 396 403
25. Kumar, S., Tamura, K., Jakobsen, I.B., Nei, M., submitted for publication. MEGA2: Molecular Evolutionary Genetics Analysis software. Bioinformatics.
26. G. Lembo, I.A. Fleming, F. Okland, P. Carbonara, and M.T. Spedicato Homing behaviour and site fidelity of Epinephlus marginatus (Lowe, 1834) around the island of Ustica: preliminary results from a telemetry study Biol. Mar. Mediterr. 6 1999 90 99
27. C. Lydeard, and K.J. Roe The phylogenetic utility of the mitochondrial cytochrome b gene for inferring relationships among Actinopterygian fishes T.D. Kocher C.A. Stepien Molecular Systematics of Fishes 1997 Academic Press San Diego, CA 285 303
28. P.B. Marko Fossil calibration of molecular clocks and the divergence times of geminate species pairs separated by Isthmus of Panama Mol. Biol. Evol. 19 11 2002 2005 2021
29. A.P. Martin, and S.R. Palumbi Body size, metabolic rate, generation time and the molecular clock Proc. Nat. Acad. Sci. U. S. A. 90 1993 4087 4091
30. A. Meyer Phylogenetic relationship and evolutionary processes in east African cichlid fishes Trends Ecol. Evol. 8 1993 279 284
31. A. Meyer, T.D. Kocher, P. Basasibwaki, and A.C. Wilson Monophyletic origin of Lake Victoria cichlid fishes suggested by mitochondrial DNA sequence Nature 347 1990 550 553
32. A.V. Morris, C.L. Roberts, and J.P. Hawkins The threatened status of status of the groupers (Epinephelinae) Bioversity and Bioversity 9 2000 919 942
33. S. Palumbi Nucleic Acids II: the Polymerase Chain Reaction D.M. Hillis C. Moritz B.K. Mable Molecular Systematics 1996 Sunderland MA
34. P. Parenti, and N. Bressi First record of the orange spotted grouper E. coioides (Perciformes, Serranidae) in northern Adriatic sea Cybium 25 2000 281 284
35. J.R. Randall, and A. Ben-Tuvia A review of the groupers (Pisces: Serranidae: Epinephelinae) of the Red Sea, with description of a new species of Cephalopholis Bull. Mar. Sci. 33 1983 373 426
36. J.R. Randall, and P.C. Heemstra Revision of IndoPacific groupers (Perciformes: Serranidae: Epinephelinae) with description of five new species Indo-Pac. Fishes 20 1991 1 296
37. J. Rozas, and R. Rozas DNAsp version 3: an integrated program for molecular populations genetics and molecular evolution analysis Bioinformatics 15 1999 174 175
38. C.L. Smith A revision of the American Groupers: Epinephelus and allied genera Bull. Am. Mus. Nat. Hist. 146 1971 (241 pp.)
39. M.L.J. Stiassny An overview of freshwater biodiversity: with some lessons from African fishes Fisheries 21 1996 7 13
40. Swofford, D.L., 1998. PAUP.* Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland Massachusetts.
41. F. Tajima Simple methods for testing molecular clock hypothesis Genetics 599 1993 599 607
42. F. Tinti, C. Piccinetti, S. Tommasini, and M. Vallisneri Mitochondrial DNA variation, phylogenetic relationships, and evolution of four Mediterranean genera of soles (Soleidae Pleuronectiformes) Mar. Biotechnol. 2 2000 274 284
43. E. Tortonese Zoogeography of the Mediterranean sea perchs (Pisces, Serranidae) Rapp. P.-V. Rèun. CIESM 12 1954 93 103
44. Tortonese, E., 1970. Fauna d'Italia, "Osteichtes" pesci ossei. (Edizioni Calderini Bologna) vol X: 55-70.
45. J.D. Thompson, D.G. Higgins, and T.J. Gibson CLUSTALW: improving the sensitivity of progressive multiple sequence allignment through sequence weighting, position specific gap penalties and weight Matrix choice Nucleic Acids Res. 22 1994 4673 4680