The endonuclease Hje catalyses rapid, multiple turnover resolution of holliday junctions

Journal of Molecular Biology

Volumn 350, Issue 1, 2005, Pages 1-6

  Parker, Joanne L ^a,b   White, Malcolm F ^a  

^a UNIVERSITY OF ST ANDREWS   (United Kingdom)

^b IMPERIAL CANCER RESEARCH FUND   (United Kingdom)

Author keywords

Archaea; Endonuclease; Holliday junction; Resolving enzyme; Steady state kinetics

Indexed keywords

BACTERIAL ENZYME; CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASE; DNA TOPOISOMERASE (ATP HYDROLYSING); PHOSPHODIESTERASE;

ARTICLE; CHEMICAL BOND; ENZYME ANALYSIS; ENZYME DEGRADATION; ENZYME KINETICS; ENZYME MECHANISM; ENZYME SPECIFICITY; ENZYME SUBSTRATE; HOLLIDAY JUNCTION; PRIORITY JOURNAL; STEADY STATE; SULFOLOBUS SOLFATARICUS;

SULFOLOBUS SOLFATARICUS;

EID: 20444390640     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2005.04.056     Document Type: Article

References (25)

1. D.M.J. Lilley, and M.F. White The junction-resolving enzymes Nature Rev. Mol. Cell Biol. 2 2001 433 443
2. Y. Liu, and S.C. West Happy Hollidays: 40th anniversary of the Holliday junction Nature Rev. Mol. Cell. Biol. 5 2004 937 944
3. P. McGlynn Links between DNA replication and recombination in prokaryotes Curr. Opin. Genet. Dev. 14 2004 107 112
4. M. Kvaratskhelia, B.N. Wardleworth, and M.F. White Multiple Holliday junction resolving enzyme activities in the Crenarchaeota and Euryarchaeota FEBS Letters 491 2001 243 246
5. M. Kvaratskhelia, B.N. Wardleworth, D.G. Norman, and M.F. White A conserved nuclease domain in the archaeal holliday junction resolving enzyme Hjc J. Biol. Chem. 275 2000 25540 25546
6. K. Komori, S. Sakae, H. Shinagawa, K. Morikawa, and Y. Ishino A Holliday junction resolvase from Pyrococcus furiosus: functional similarity to Escherichia coli RuvC provides evidence for conserved mechanism of homologous recombination in bacteria, eukarya, and archaea Proc. Natl Acad. Sci. USA 96 1999 8873 8878
7. T. Nishino, K. Komori, D. Tsuchiya, Y. Ishino, and K. Morikawa Crystal structure of the archaeal Holliday junction resolvase Hjc and implications for DNA recognition Structure 9 2001 197 204
8. C.S. Bond, M. Kvaratskhelia, D. Richard, M.F. White, and W.N. Hunter Structure of Hjc, a Holliday junction resolvase, from Sulfolobus solfataricus Proc. Natl Acad. Sci. USA 98 2001 5509 5514
9. T. Nishino, K. Komori, Y. Ishino, and K. Morikawa X-ray and biochemical anatomy of an archaeal XPF/Rad1/Mus81 family nuclease: similarity between its endonuclease domain and restriction enzymes Structure (Camb) 11 2003 445 457
10. M. Kvaratskhelia, and M.F. White An archaeal Holliday junction resolving enzyme with unique properties J. Mol. Biol. 295 2000 193 202
11. C.L. Middleton, J.L. Parker, D.J. Richard, M.F. White, and C.S. Bond Substrate recognition and catalysis by the Holliday junction resolving enzyme Hje Nucl. Acids Res. 32 2004 5442 5451
12. S.E. Halford Hopping, jumping and looping by restriction enzymes Biochem. Soc Trans. 29 2001 363 374
13. G.S. Baldwin, I.B. Vipond, and S.E. Halford Rapid reaction analysis of the catalytic cycle of the EcoRV restriction-endonuclease Biochemistry 34 1995 705 714
14. H. Gutfreund Enzymes: Physical Principles 1972 Wiley London
15. J.M. Fogg, M.J. Schofield, A.C. Declais, and D.M. Lilley Yeast resolving enzyme CCE1 makes sequential cleavages in DNA junctions within the lifetime of the complex Biochemistry 39 2000 4082 4089
16. J.M. Fogg, and D.M. Lilley Ensuring productive resolution by the junction-resolving enzyme RuvC: large enhancement of the second-strand cleavage rate Biochemistry 39 2000 16125 16134
17. J. Fogg, M.J. Schofield, M.F. White, and D.M.J. Lilley Sequence and functional-group specificity for cleavage of DNA junctions by RuvC of Escherichia coli Biochemistry 38 1999 11349 11358
18. M.J. Giraud-Panis, and D.M. Lilley Structural recognition and distortion by the DNA junction-resolving enzyme RusA J. Mol. Biol. 278 1998 117 133
19. M.F. White, and D.M.J. Lilley The structure-selectivity and sequence-preference of the junction-resolving enzyme CCE1 of Saccharomyces cerevisiae J. Mol. Biol. 257 1996 330 341
20. J.M. Hadden, M.A. Convery, A.C. Declais, D.M.J. Lilley, and S.E.V. Phillips Crystal structure of the Holliday junction resolving enzyme T7 endonuclease I at 2.1 Å resolution Nature Struct. Biol. 8 2001 62 67
21. S.G. Erskine, G.S. Baldwin, and S.E. Halford Rapid-reaction analysis of plasmid DNA cleavage by the EcoRV restriction endonuclease Biochemistry 36 1997 7567 7576
22. D.J. Wright, W.E. Jack, and P. Modrich The kinetic mechanism of EcoRI endonuclease J. Biol. Chem. 274 1999 31896 31902
23. J.D. Taylor, and S.E. Halford Discrimination between DNA sequences by the EcoRV restriction endonuclease Biochemistry 28 1989 6198 6207
24. A.K. Eggleston, and S.C. West Cleavage of Holliday junctions by the Escherichia coli RuvABC Complex J. Biol. Chem. 275 2000 26467 26476
25. M. Kvaratskhelia, and M.F. White Two Holliday junction resolving enzymes in Sulfolobus solfataricus J. Mol. Biol. 297 2000 923 932