Multiple protein sequence comparison by genetic algorithms

Proceedings of SPIE - The International Society for Optical Engineering

Volumn 3390, Issue , 1998, Pages 99-102

  González, Raquel Roche ^a   Izquierdo, Carmen Morató ^a   Seijas, Juan ^a  

^a UNIVERSIDAD POLITÉCNICA DE MADRID   (Spain)

Author keywords

Genetic Algorithms; RNA; Sequence alignment

Indexed keywords

ARTIFICIAL INTELLIGENCE; BINARY SEQUENCES; GENETIC ALGORITHMS; MOLECULAR BIOLOGY; PROTEINS; RNA;

M SEQUENCE; MOLECULAR EVOLUTION; NEW APPROACHES; PROTEIN SEQUENCES; SEQUENCE ALIGNMENTS; SEQUENCES COMPARISONS;

BIOINFORMATICS;

EID: 20444378669     PISSN: 0277786X     EISSN: 1996756X     Source Type: Conference Proceeding    
DOI: 10.1117/12.304857     Document Type: Conference Paper

References (7)

1. C. Morato and J. Seijas. Genetic algorithms for DNA/RNA sequences comparison. Society for Computer Simulation International. Oct. 96.
2. Waterman et al. Some biological sequence metrics. Adv. Math. 20, 367-387. (1976).
3. J. Seijas and J. L Sanz. Basic evolutive algorithms for N. N. Architecture Configuration and Training. IEEE International Symposium on Circuits and Systems. Seattle, May 95.
4. Lipman, D. J., Altschul, S. F. and Kececioglu, J. D. A tool for multiple sequence alignment. Proc. natl. Acad. Sci. U. S. A. 86, 4412-4415. (1989).
5. Feng, D. F. and Doolittle, R. F. Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J. Mol. Evol. 25, 353-360. (1987).
6. Waterman, M. S. and Perlwitz, M. D. Line geometries for sequence comparisons. Bull. math. Biol. 46, 567-577. (1984).
7. Dayhoff, M. O., Schwartz, R. M. and Orcutt, B. C. A model of evolutionary change in proteins. Dayhoff, M. O. Atlas of Protein Sequence and Structure, Vol. 5, Suppl. 3. pp. 345-358. National Biomedical Research Foundation, Washington, DC. (1978).