-
1
-
-
0026955823
-
The utility of side-chain cyclization in determining the receptor-bound conformation of peptides: Cyclic tripeptides and angiotensin II
-
1. Kataoka, T.; Beusen, D. D.; John D. Clark; Yodo, M.; Marshall, G. R. Biopolymers 1992, 32, 1519-1533. The Utility of Side-Chain Cyclization in Determining the Receptor-Bound Conformation of Peptides: Cyclic Tripeptides and Angiotensin II
-
(1992)
Biopolymers
, vol.32
, pp. 1519-1533
-
-
Kataoka, T.1
Beusen, D.D.2
Clark, J.D.3
Yodo, M.4
Marshall, G.R.5
-
2
-
-
0027302576
-
Multiple binding modes for the receptor-bound conformations of cyclic AII agonists
-
2. Plucinska, K.; Kataoka, T.; Yodo, M.; Cody, W. L.; He, J. X.; Humblet, C.; Lu, G. H.; Lunney, E.; Major, T. C.; Panek, R. L.; Schelkun, P.; Skeean, R.; Marshall, G. R. J. Med. Chem. 1993, 36, 1902-1913. Multiple Binding Modes for the Receptor-Bound Conformations of Cyclic AII Agonists.
-
(1993)
J. Med. Chem.
, vol.36
, pp. 1902-1913
-
-
Plucinska, K.1
Kataoka, T.2
Yodo, M.3
Cody, W.L.4
He, J.X.5
Humblet, C.6
Lu, G.H.7
Lunney, E.8
Major, T.C.9
Panek, R.L.10
Schelkun, P.11
Skeean, R.12
Marshall, G.R.13
-
3
-
-
0024269837
-
-
3. Pramanik, B.; Tsarbopoulos, A.; Labdon, J. E.; Czarniecki, M.; Nagabhushan, T. L.; Trotta, P. P. Biochem. Biophys. Res. Commun. 1988, 157, 836-843.
-
(1988)
Biochem. Biophys. Res. Commun.
, vol.157
, pp. 836-843
-
-
Pramanik, B.1
Tsarbopoulos, A.2
Labdon, J.E.3
Czarniecki, M.4
Nagabhushan, T.L.5
Trotta, P.P.6
-
4
-
-
20244389085
-
-
Submitted
-
4. Schmidt, B.; Lindman, S.; Tong, W.; Lindeberg, G.; Gogoll, A.; Lai, Z.; Thörnwall, M.; Synnergren, B.; Nilsson, A.; Welch, C. J.; Sohtell, M.; Westerlund, C.; Nyberg, F.; Karlén, A.; Hallberg, A. (Submitted).
-
-
-
Schmidt, B.1
Lindman, S.2
Tong, W.3
Lindeberg, G.4
Gogoll, A.5
Lai, Z.6
Thörnwall, M.7
Synnergren, B.8
Nilsson, A.9
Welch, C.J.10
Sohtell, M.11
Westerlund, C.12
Nyberg, F.13
Karlén, A.14
Hallberg, A.15
-
5
-
-
0025311044
-
-
5. Spear, K. L.; Brown, M. S.; Reinhard, E. J.; McMahon, E. G.; Olins, G. M.; Palomo, M. A.; Patton, D. R. J. Med. Chem. 1990, 33, 1935-1940.
-
(1990)
J. Med. Chem.
, vol.33
, pp. 1935-1940
-
-
Spear, K.L.1
Brown, M.S.2
Reinhard, E.J.3
McMahon, E.G.4
Olins, G.M.5
Palomo, M.A.6
Patton, D.R.7
-
6
-
-
0011979782
-
-
Conformational analysis of 1 (using the Amber* all atom force field) and 3 and 4 (using the MM2* force field) was performed using the Systematic Unbound Multiple Minimum search (SUMM) option in the batchmin program (command SPMC). 5000-step runs were performed, and those conformations within 50 kJ/mol of the global minimum was kept. Truncated Newton Conjugated Gradient (TNCG) minimisation with a maximum of 5000 iterations was used in the Monte Carlo search with the default derivate convergence criteria used (0.05 kJ/Å-mol). All torsion angles except the amide bonds, which were set in the trans configuration, were defined as rotatable
-
6. Conformational analysis of 1 (using the Amber* all atom force field) and 3 and 4 (using the MM2* force field) was performed using the Systematic Unbound Multiple Minimum search (SUMM) option in the batchmin program (command SPMC). 5000-step runs were performed, and those conformations within 50 kJ/mol of the global minimum was kept. Truncated Newton Conjugated Gradient (TNCG) minimisation with a maximum of 5000 iterations was used in the Monte Carlo search with the default derivate convergence criteria used (0.05 kJ/Å-mol). All torsion angles except the amide bonds, which were set in the trans configuration, were defined as rotatable.
-
-
-
-
7
-
-
84986437005
-
Macromodel - An integrated software system for modeling organic and bioorganic molecules using molecular mechanics
-
7. Mohamadi, F.; Richards, N. G. J.; Guida, W. C.; Liskamp, R.; Lipton, M.; Caufield, C.; Chang, G.; Hendrickson, T.; Still, W. C. J. Comput. Chem. 1990, 11, 440-467. MacroModel - An Integrated Software System for Modeling Organic and Bioorganic Molecules using Molecular Mechanics.
-
(1990)
J. Comput. Chem.
, vol.11
, pp. 440-467
-
-
Mohamadi, F.1
Richards, N.G.J.2
Guida, W.C.3
Liskamp, R.4
Lipton, M.5
Caufield, C.6
Chang, G.7
Hendrickson, T.8
Still, W.C.9
-
8
-
-
0011998152
-
-
8. (a) Bachmann, W. E., Kushner, S., Stevenson A. C. J. Am. Chem. Soc. 1942, 64, 974-981.
-
(1942)
J. Am. Chem. Soc.
, vol.64
, pp. 974-981
-
-
Bachmann, W.E.1
Kushner, S.2
Stevenson, A.C.3
-
11
-
-
0000953585
-
-
(d) Nagata, W., Sugasawa, T., Narisada, M., Wakabayashi, T., Hayase, Y. J. Am. Chem. Soc. 1967, 89, 1483-1499.
-
(1967)
J. Am. Chem. Soc.
, vol.89
, pp. 1483-1499
-
-
Nagata, W.1
Sugasawa, T.2
Narisada, M.3
Wakabayashi, T.4
Hayase, Y.5
-
15
-
-
0000326032
-
-
(h) Feigenbaum, A., Fort, Y., Pete, J-P., Scholler, D. J. Org. Chem. 1986, 51, 4424-4432.
-
(1986)
J. Org. Chem.
, vol.51
, pp. 4424-4432
-
-
Feigenbaum, A.1
Fort, Y.2
Pete, J.-P.3
Scholler, D.4
-
17
-
-
0028202773
-
-
(b) Bennett, F., Fenton, G., Knight, D. W. Tetrahedron. 1994, 50, 5147-5158.
-
(1994)
Tetrahedron.
, vol.50
, pp. 5147-5158
-
-
Bennett, F.1
Fenton, G.2
Knight, D.W.3
-
19
-
-
0011927780
-
-
(b) Johnson, W. S., Jones, A. R., Schneider, W. P. J. Am. Chem. Soc. 1950, 72, 2395-2401.
-
(1950)
J. Am. Chem. Soc.
, vol.72
, pp. 2395-2401
-
-
Johnson, W.S.1
Jones, A.R.2
Schneider, W.P.3
-
21
-
-
85023399354
-
-
(d) Birch, A. J., Smith, H., Thornton, R. E. Chem. Ind. 1956, 1310-1310.
-
(1956)
Chem. Ind.
, pp. 1310-1310
-
-
Birch, A.J.1
Smith, H.2
Thornton, R.E.3
-
22
-
-
0011961070
-
-
(e) Birch, A. J., Smith, H., Thornton, R. E. J. Chem. Soc. 1957, 1339-1342.
-
(1957)
J. Chem. Soc.
, pp. 1339-1342
-
-
Birch, A.J.1
Smith, H.2
Thornton, R.E.3
-
26
-
-
0011958437
-
-
(l) Julia, M., Chottard, J-C., Basselier, J-J. Bull. Soc. Chim. Fr. 1966, 3037-3039.
-
(1966)
Bull. Soc. Chim. Fr.
, pp. 3037-3039
-
-
Julia, M.1
Chottard, J.-C.2
Basselier, J.-J.3
-
31
-
-
0001515103
-
-
11. Salmond, W. G., Barta, M. A., Havens, J. J. Org. Chem. 1978, 43, 2057-2059.
-
(1978)
J. Org. Chem.
, vol.43
, pp. 2057-2059
-
-
Salmond, W.G.1
Barta, M.A.2
Havens, J.3
-
34
-
-
0012009264
-
-
(c) Taber, D. F., Gunn, B. P., Chiu, I-Ching. Organic Synthesis. 1983, 61, 59-61.
-
(1983)
Organic Synthesis
, vol.61
, pp. 59-61
-
-
Taber, D.F.1
Gunn, B.P.2
Chiu, I.-C.3
-
35
-
-
0000892898
-
-
(d) Suzuki, M., Kawagishi, T., Noyori, R. Tetrahedron Lett. 1981, 22, 1809-1812.
-
(1981)
Tetrahedron Lett.
, vol.22
, pp. 1809-1812
-
-
Suzuki, M.1
Kawagishi, T.2
Noyori, R.3
-
37
-
-
37049077803
-
-
(f) Marson, C. M., Benzies, D. W. M., Hobson, A. D., Adams, H., Bailey, N. A. J. Chem. Soc. Chem. Comm. 1990, 1516-1518.
-
(1990)
J. Chem. Soc. Chem. Comm.
, pp. 1516-1518
-
-
Marson, C.M.1
Benzies, D.W.M.2
Hobson, A.D.3
Adams, H.4
Bailey, N.A.5
-
38
-
-
0011979783
-
-
(g) Armitage, M. A., Lathbury, D. C., Mitchell, M. B. J. Chem. Soc. Perkin. Trans 1. 1994, 1551-1552.
-
(1994)
J. Chem. Soc. Perkin. Trans 1.
, pp. 1551-1552
-
-
Armitage, M.A.1
Lathbury, D.C.2
Mitchell, M.B.3
-
39
-
-
85047674262
-
-
(h) Majetich, G., Liu, S., Siesel, D. Tetrahedron Lett. 1995, 36, 4749-4752.
-
(1995)
Tetrahedron Lett.
, vol.36
, pp. 4749-4752
-
-
Majetich, G.1
Liu, S.2
Siesel, D.3
-
40
-
-
0002615355
-
The NRCVAX crystal structure system
-
edited by G.M. Sheldrick, C. Kruger and R. Goddard, Clarendon Press, Oxford
-
13. Gabe, E.J.; Lee, F.L., LePage, Y. The NRCVAX Crystal Structure System. In Crystallographic Computing 3, Data Collection, Structure Determination, Proteins and Databases, edited by G.M. Sheldrick, C. Kruger and R. Goddard, Clarendon Press, Oxford, 1985, 167-174.
-
(1985)
Crystallographic Computing 3, Data Collection, Structure Determination, Proteins and Databases
, pp. 167-174
-
-
Gabe, E.J.1
Lee, F.L.2
LePage, Y.3
-
41
-
-
0001656596
-
-
14. (a) Taylor, S. K.; Hockerman, G. H.; Karrick, G. L.; Lyle, S. B.; Schramm, S. B. J. Org. Chem. 1983, 48, 2449-2452.
-
(1983)
J. Org. Chem.
, vol.48
, pp. 2449-2452
-
-
Taylor, S.K.1
Hockerman, G.H.2
Karrick, G.L.3
Lyle, S.B.4
Schramm, S.B.5
-
42
-
-
0000124714
-
-
(b) Taylor, S. K.; Davisson, M. E.; Hissom, B. R.; Brown, S. L.; Pristach, H. A.; Schramm, S. B.; Harvey, S. M. J. Org. Chem. 1987, 52, 425-429.
-
(1987)
J. Org. Chem.
, vol.52
, pp. 425-429
-
-
Taylor, S.K.1
Davisson, M.E.2
Hissom, B.R.3
Brown, S.L.4
Pristach, H.A.5
Schramm, S.B.6
Harvey, S.M.7
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