Aspartyl-tRNA synthetase requires a conserved proline in the anticodon-binding loop for tRNAAsn recognition in vivo

Journal of Biological Chemistry

Volumn 280, Issue 21, 2005, Pages 20638-20641

  Feng, Liang ^a   Yuan, Jing ^a   Toogood, Helen ^a,b   Tumbula Hansen, Debra ^a,c   Söll, Dieter ^a  

^a YALE UNIVERSITY   (United States)

^b UNIVERSITY OF LEICESTER   (United Kingdom)

^c MEDICAL UNIVERSITY OF SOUTH CAROLINA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BIOCHEMISTRY; DNA; ESCHERICHIA COLI; GENES; RNA; SYNTHESIS (CHEMICAL); THERMAL EFFECTS;

D.RADIODURANS; PROKARYOTES; PROLINE CODONS; RECOGNITION PROPERTIES;

ENZYMES;

ASPARAGINE TRANSFER RNA; ASPARTATE TRANSFER RNA LIGASE; ASPARTIC ACID; ASPARTIC ACID TRANSFER RNA; CYSTEINE; ISOLEUCINE; LYSINE; MUTANT PROTEIN; PHENYLALANINE; PROLINE; SERINE; TRANSFER RNA; VALINE;

ACYLATION; AMINO ACID SUBSTITUTION; ANTICODON; ARTICLE; ASPS2 GENE; BACTERIAL GENE; BACTERIAL GROWTH; CODON; CONTROLLED STUDY; DEINOCOCCUS RADIODURANS; DNA LIBRARY; ESCHERICHIA COLI; GENETIC CONSERVATION; IN VIVO STUDY; MOLECULAR RECOGNITION; NONHUMAN; PRIORITY JOURNAL; PROTEIN RNA BINDING; RNA SYNTHESIS; TEMPERATURE SENSITIVE CLONE; TRPA34 GENE;

ACYLATION; AMINO ACID SEQUENCE; ANTICODON; ASPARTATE-TRNA LIGASE; ASPARTIC ACID; BINDING SITES; CONSERVED SEQUENCE; DEINOCOCCUS; DNA, BACTERIAL; ESCHERICHIA COLI; GENE EXPRESSION; MOLECULAR SEQUENCE DATA; MUTAGENESIS; PROLINE; PROTEIN CONFORMATION; RECOMBINANT PROTEINS; RNA, TRANSFER, ASN; SEQUENCE ALIGNMENT; STRUCTURE-ACTIVITY RELATIONSHIP; SUBSTRATE SPECIFICITY; TRANSFORMATION, BACTERIAL;

DEINOCOCCUS RADIODURANS; ESCHERICHIA COLI; PROKARYOTA;

EID: 20144367520     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M500874200     Document Type: Article

References (22)

1. Ibba, M., and Söll, D. (2000) Annu. Rev. Biochem. 69, 617-650
2. Hendrickson, T. L., and Schimmel, P. (2004) in Translation Mechanisms (Lapointe, J., and Brakier-Gingras, L., eds) pp. 34-64, Landes Biosciences, Georgetown, TX
3. Nureki, O., Vassylyev, D. G., Tateno, M., Shimada, A., Nakama, T., Fukai, S., Konno, M., Hendrickson, T. L., Schimmel, P., and Yokoyama, S. (1998) Science 280, 578-582
4. Silvian, L. F., Wang, J., and Steitz, T. A. (1999) Science 285, 1074-1077
5. Dock-Bregeon, A. C., Rees, B., Torres-Larios, A., Bey, G., Caillet, J., and Moras, D. (2004) Mol. Cell 16, 375-386
6. Feng, L., Tumbula-Hansen, D., Min, B., Namgoong, S., Salazar, J., Orellana, O., and Söll, D. (2004) in Aminoacyl-tRNA Synthetases (Ibba, M., Francklyn, C., and Cusack, S., eds) pp. 314-319, Landes Biosciences, Georgetown, TX
7. Becker, H. D., and Kern, D. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 12832-12837
8. Curnow, A. W., Tumbula, D. L., Pelaschier, J. T., Min, B., and Söll, D. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 12838-12843
9. Charron, C., Roy, H., Blaise, M., Giegé, R., and Kern, D. (2003) EMBO J. 22, 1632-1643
10. Tumbula-Hansen, D., Feng, L., Toogood, H., Stetter, K. O., and Söll, D. (2002) J. Biol. Chem. 277, 37184-37190
11. Feng, L., Tumbula-Hansen, D., Toogood, H., and Söll, D. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 5676-5681
12. Pütz, J., Puglisi, J. D., Florentz, C., and Giegé, R. (1991) Science 252, 1696-1699
13. Becker, H. D., Giegé, R., and Kern, D. (1996) Biochemistry 35, 7447-7458
14. Brevet, A., Chen, J., Commans, S., Lazennec, C., Blanquet, S., and Plateau, P. (2003) J. Biol. Chem. 278, 30927-30935
15. Li, T., Graham, D. E., Stathopoulos, C., Haney, P. J., Kim, H. S., Vothknecht, U., Kitabatake, M., Hong, K. W., Eggertsson, G., Curnow, A. W., Lin, W., Celic, I., Whitman, W., and Söll, D. (1999) FEBS Lett. 462, 302-306
16. Sharples, G. J., and Lloyd, R. G. (1991) Mutat. Res. 264, 93-96
17. Min, B., Pelaschier, J. T., Graham, D. E., Tumbula-Hansen, D., and Söll, D. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 2678-2683
18. Fechter, P., Rudinger, J., Giegé, R., and Theobald-Dietrich, A. (1998) FEBS Lett. 436, 99-103
19. Shirvanee, L., Horn, V., and Yanofsky, C. (1990) J. Biol. Chem. 265, 6624-6625
20. Min, B., Kitabatake, M., Polycarpo, C., Pelaschier, J., Raczniak, G., Ruan, B., Kobayashi, H., Namgoong, S., and Sóll, D. (2003) J. Bacteriol. 185, 3524-3526
21. Kowal, A. K., Köhrer, C., and RajBhandary, U. L. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 2268-2273
22. Berthet-Colominas, C., Seignovert, L., Härtlein, M., Grotli, M., Cusack, S., and Leberman, R. (1998) EMBO J. 17, 2947-2960