메뉴 건너뛰기




Volumn 3, Issue 10, 2004, Pages 1023-1038

Experimental peptide indentification repository (EPIR)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE; PROTEIN;

EID: 20144365752     PISSN: 15359476     EISSN: None     Source Type: Journal    
DOI: 10.1074/mcp.T400004-MCP200     Document Type: Article
Times cited : (35)

References (20)
  • 1
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold, R., and Mann, M. (2003) Mass spectrometry-based proteomics. Nature 422, 198-207
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 2
    • 0037338297 scopus 로고    scopus 로고
    • Data analysis - The Achilles heel of proteomics
    • Patterson, S. D. (2003) Data analysis - The Achilles heel of proteomics. Nat. Biotechnol. 21, 221-222
    • (2003) Nat. Biotechnol. , vol.21 , pp. 221-222
    • Patterson, S.D.1
  • 3
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng, J. K., McCormack, A. L., and Yates, J. R., 3rd (1994) An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5, 976-989
    • (1994) J. Am. Soc. Mass Spectrom. , vol.5 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates III, J.R.3
  • 4
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins, D. N., Pappin, D. J., Creasy, D. M., and Cottrell, J. S. (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20, 3551-3567
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 6
    • 0041859530 scopus 로고    scopus 로고
    • Preprocessing of tandem mass spectrometric data to support automatic protein identification
    • Gentzel, M., Kocher, T., Ponnusamy, S., and Wilm, M. (2003) Preprocessing of tandem mass spectrometric data to support automatic protein identification. Proteomics 3, 1597-1610
    • (2003) Proteomics , vol.3 , pp. 1597-1610
    • Gentzel, M.1    Kocher, T.2    Ponnusamy, S.3    Wilm, M.4
  • 9
    • 0034484286 scopus 로고    scopus 로고
    • Method for screening peptide fragment ion mass spectra prior to database searching
    • Moore, R. E., Young, M. K., and Lee, T. D. (2000) Method for screening peptide fragment ion mass spectra prior to database searching. J. Am. Soc. Mass Spectrom. 11, 422-426
    • (2000) J. Am. Soc. Mass Spectrom. , vol.11 , pp. 422-426
    • Moore, R.E.1    Young, M.K.2    Lee, T.D.3
  • 10
    • 0037953090 scopus 로고    scopus 로고
    • Similarity among tandem mass spectra from proteomic experiments: Detection, significance, and utility
    • Tabb, D. L., MacCoss, M. J., Wu, C. C., Anderson, S. D., and Yates, J. R., 3rd (2003) Similarity among tandem mass spectra from proteomic experiments: Detection, significance, and utility. Anal. Chem. 75, 2470-2477
    • (2003) Anal. Chem. , vol.75 , pp. 2470-2477
    • Tabb, D.L.1    MacCoss, M.J.2    Wu, C.C.3    Anderson, S.D.4    Yates III, J.R.5
  • 11
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • Nesvizhskii, A. I., Keller, A., Kolker, E., and Aebersold, R. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75, 4646-4658
    • (2003) Anal. Chem. , vol.75 , pp. 4646-4658
    • Nesvizhskii, A.I.1    Keller, A.2    Kolker, E.3    Aebersold, R.4
  • 12
    • 0041358793 scopus 로고    scopus 로고
    • OLAV: Towards high-throughput tandem mass spectrometry data identification
    • Colinge, J., Masselot, A., Giron, M., Dessingy, T., and Magnin, J. (2003) OLAV: Towards high-throughput tandem mass spectrometry data identification. Proteomics 3, 1454-1463
    • (2003) Proteomics , vol.3 , pp. 1454-1463
    • Colinge, J.1    Masselot, A.2    Giron, M.3    Dessingy, T.4    Magnin, J.5
  • 13
    • 0036138754 scopus 로고    scopus 로고
    • Peptide sequence motif analysis of tandem MS data with the SALSA algorithm
    • Liebler, D. C., Hansen, B. T., Davey, S. W., Tiscareno, L., and Mason, D. E. (2002) Peptide sequence motif analysis of tandem MS data with the SALSA algorithm. Anal. Chem. 74, 203-210
    • (2002) Anal. Chem. , vol.74 , pp. 203-210
    • Liebler, D.C.1    Hansen, B.T.2    Davey, S.W.3    Tiscareno, L.4    Mason, D.E.5
  • 14
    • 0242653718 scopus 로고    scopus 로고
    • Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation
    • Kapp, E. A., Schutz, F., Reid, G. E., Eddes, J. S., Moritz, R. L., O'Hair, R. A., Speed, T. P., and Simpson, R. J. (2003) Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation. Anal. Chem. 75, 6251-6264
    • (2003) Anal. Chem. , vol.75 , pp. 6251-6264
    • Kapp, E.A.1    Schutz, F.2    Reid, G.E.3    Eddes, J.S.4    Moritz, R.L.5    O'Hair, R.A.6    Speed, T.P.7    Simpson, R.J.8
  • 15
    • 2142721825 scopus 로고    scopus 로고
    • Hystag - A novel proteomic quantification tool applied to differential display analysis of membrane proteins from distinct areas of mouse brain
    • Olsen, J. V., Andersen, J. R., Nielsen, P. A., Nielsen, M. L., Figeys, D., Mann, M., and Wisniewski, J. R. (2004) Hystag - A novel proteomic quantification tool applied to differential display analysis of membrane proteins from distinct areas of mouse brain. Mol. Cell. Proteomics 3, 82-92
    • (2004) Mol. Cell Proteomics , vol.3 , pp. 82-92
    • Olsen, J.V.1    Andersen, J.R.2    Nielsen, P.A.3    Nielsen, M.L.4    Figeys, D.5    Mann, M.6    Wisniewski, J.R.7
  • 16
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 17
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong, S. E., Blagoev, B., Kratchmarova, I., Kristensen, D. B., Steen, H., Pandey, A., and Mann, M. (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell. Proteomics 1, 376-386
    • (2002) Mol. Cell Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5    Pandey, A.6    Mann, M.7
  • 18
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A., Larsson, B., von Heijne, G., and Sonnhammer, E. L. (2001) Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes. J. Mol. Biol. 305, 567-580
    • (2001) J. Mol. Biol. , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 19
    • 0030743517 scopus 로고    scopus 로고
    • Temperature control for kinetic refolding of heat-denatured ovalbumin
    • Tani, F., Shirai, N., Onishi, T., Venelle, F., Yasumoto, K., and Doi, E. (1997) Temperature control for kinetic refolding of heat-denatured ovalbumin. Protein Sci. 6, 1491-1502
    • (1997) Protein Sci. , vol.6 , pp. 1491-1502
    • Tani, F.1    Shirai, N.2    Onishi, T.3    Venelle, F.4    Yasumoto, K.5    Doi, E.6
  • 20
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi, S. P., Rist, B., Gerber, S. A., Turecek, F., Gelb, M. H., and Aebersold, R. (1999) Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17, 994-999
    • (1999) Nat. Biotechnol. , vol.17 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.