Isolation and identification of 3-methylcrotonyl coenzyme A carboxylase cDNAs and pyruvate carboxylase, and their expression in red seabream (Pagrus major) organs

Marine Biotechnology

Volumn 6, Issue 6, 2004, Pages 527-540

  Abe, Shunnosuke ^a   Chamnan, Chhoun ^a   Miyamoto, Kenichi ^a   Minamino, Yasutaka ^a   Nouda, Makoto ^a  

^a EHIME UNIVERSITY   (Japan)

Author keywords

Biotin; MCCase; mRNA; PCase; PCCase; Red seabream

Indexed keywords

BIOLOGICAL ORGANS; DNA SEQUENCES; METABOLISM; MUSCLE; RNA;

BIOTIN; CARBOXYLASE; CODING SEQUENCES; NUCLEOTIDES;

COENZYMES;

COMPLEMENTARY DNA; LIGASE; METHYLCROTONOYL COA CARBOXYLASE; METHYLCROTONOYL-COA CARBOXYLASE; PRIMER DNA; PYRUVATE CARBOXYLASE;

ENZYME;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CLUSTER ANALYSIS; COMPARATIVE STUDY; DNA SEQUENCE; FEMALE; GENE EXPRESSION; GENETICS; LIVER; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; OVARY; PERCIFORMES; PHYLOGENY; POLYACRYLAMIDE GEL ELECTROPHORESIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SKELETAL MUSCLE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BLOTTING, NORTHERN; CARBON-CARBON LIGASES; CLONING, MOLECULAR; CLUSTER ANALYSIS; DNA PRIMERS; DNA, COMPLEMENTARY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FEMALE; GENE EXPRESSION; LIVER; MOLECULAR SEQUENCE DATA; MUSCLE, SKELETAL; OVARY; PERCIFORMES; PHYLOGENY; PYRUVATE CARBOXYLASE; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

PAGRUS MAJOR;

EID: 19944385955     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-004-4203-x     Document Type: Article

References (33)

1. S. Abe E. Davies 1995 Methods for isolation an analysis of the cytoskeleton Methods Cell Biol B 50 223 236
2. S. Abe Y. Ito E. Davies 1992 Cosedimentation of actin, tubulin and membranes in the cytoskeleton fractions from peas and mouse 3T3 cells J Exp Botany 43 941 949
3. S. Abe Y. Ito H. Doi K. Shibata K. Azama E. Davies 1996 Distribution of actin and tubulin in the cytoskeletal fraction from a variety of plant and animal tissues ? 41 1 10 Memoir of College of Agriculture, Ehime University
4. BASF (1998). Vitamin nutrition in cold-water fish, II. Animal Nutrition News NN9093, Bulletins. Mount Olive, N. J.: BASF Cooperation
5. Cleveland, D.W., Fisher, S.G., Kirschner, M.W., Laemmli, U,K. (1977) "Peptide mapping by limited proteolysis in sodium dodecylsulfate and analysis by gel electrophoresis" J Biol Chem 252: 1102-1106
6. B. Crabtree S.J. Higgins E.A. Newsholme 1972 The activities of pyruvate carboxylase, phosphoenolpyruvate carboxylase and fructose diphosphatase in muscles from vertebrates and invertebrates Biochem J 130 391 396
7. A.L. Goldberg T.W. Chang 1978 Regulation and significance of amino acid metabolism in skeletal muscle Fed Proc 37 2301 2307
8. J.A. Goss N.D. Cohen M.F. Utter 1981 Characterization of the subunit structure of pyruvate carboxylase from Pseudomonas citronellolis J Biol Chem 256 11819 11825
9. T.A. Gray K. Azama K. Whitmore A. Min S. Abe R.D. Nicholls 2001 Phylogenetic conservation of the makorin-2 gene, encoding multiple zinc-finger protein, antisense to the RAF1 proto-oncogene Genomics 77 119 126
10. K.D. Gunther K.H. Meyer-Burgdorff 1990 Studies on biotin supply to mirror carp (Cyprinus carpio L.) Aquaculture 84 49 60
11. A. Holzinger W. Roschinger F. Lagler P.U. Mayerhofer P. Lichtner T. Kattenfeld L.P. Thuy W.L. Nyhan H.G. Koch A.C. Muntau A.A. Roscher 2001 Cloning of the human MCCA and MCCB genes and mutations therein reveal the molecular cause of 3-methylcrotonyl-CoA: carboxylase deficiency Hum Mol Genet 10 1299 1306
12. S. Jitrapakdee G.W. Booker A.I. Cassady J.C. Wallace 1996 Cloning, sequencing, and expression of rat liver pyruvate carboxylase Biochem J 316 631 637
13. M. Kozak 1999 Initiation of translation in prokaryotes and eukaryotes Gene 234 187 208
14. D.P. Lau B.C. Cochran R.R. Fall 1980 Isolation of 3-methylcrotonyl-CoA carboxylase from bovine kidney Arch Biochem Biophys 205 352 359
15. A.L. McKean J. Ke J. Song P. Che S. Achenbach B.J. Nikolau E.S. Wurtele 2000 Molecular characterization of the non-biotin-containing subunit of 3-methylcrotonyl-CoA carboxylase J Biol Chem 275 5582 5590
16. M.D. Mock D.L. Baswell R.T. Holman L. Sweetman 1985 Biotin deficiency complicating parental alimentation: diagnosis, metabolic repercussions, and treatment J Pediatr 106 762 769
17. J. Moss M.D. Lane 1971 The biotin-dependent enzymes Adv Enzymol 35 321 442
18. K. Murayama M. Kimura S. Ymaguchi T. Shinka K. Kodama 1997 Isolated 3-methylcrotonyl-CoA carboxylase deficiency in a 15-year-old girl Brain Dev 19 303 305
19. National Research Council. (1973). Nutrient Requirements of Trout, Salmon and Catfish. Washington, D.C.: National Research Council
20. K. Obata T. Fukuda R Morishita S. Abe S. Asakawa S. Yamaguchi M. Yoshino K. Ihara Murayama Keiko. K. Shigemoto N. Shimizu I. Kondo 2001 Human biotin-containing subunit of 3-methylcrotonyl-CoA carboxylase gene (MCCA): cDNA sequence, genomic organization, localization to chromosomal band 3q27, and expression Genomics 72 145 152
21. J. Oei B.H. Robinson 1985 Simultaneous preparation of the three biotin-containing mitochondrial carboxylases from rat liver Biochim Biophys Acta 840 1 5
22. G. Popjak 1971 Specificity of enzymes of sterol biosynthesis Harvey Lect 65 127 156
23. I Song E.S. Wurtele B.J. Nikolau 1994 Molecular cloning and characterization of the cDNA coding for the biotin-containing subunit of 3-methylcrotonyl-CoA carboxylase: identification of the biotin carboxylase and biotin carrier domains Proc Natl Acad Sci U S A 91 5779 5783
24. M.F. Utter D.B. Keech 1963 Pyruvate carboxylase, I: nature of the reaction J Biol Chem 23 2603 2608
25. J.C. Wallace S. Jitrapakdee A. Chapman-Smith 1998 Pyruvate carboxylase Int J BiochemCell B 30 1 5
26. X. Wang E.S. Wurtele G. Keller A.L. McKean B.J. Nikolau 1994 Molecular cloning of cDNA and genes coding for B-methylcrotonyl-CoA carboxylase of tomato J Biol Chem 269 11760 11768
27. T. Watanabe 1983 Teratogenic effects of biotin deficiency in mice J Nutr 113 574 581
28. L.M. Weaver L. Lebrun A. Franklin L. Huang N. Hoffman E.S. Wurtele B.J. Nikolau 1995 Molecular cloning of the biotinylated subunit of 3-methylcrotonyl-coezyme A carboxylase of Arabidopsis thaliana Plant Physiol 107 1013 1014
29. C.C. Whitehead 1985 Assessment of biotin deficiency in animals Ann N Y Acad Sci 447 86 96
30. B. Wolf Y.E. Hsia L. Sweetman G. Feldman R.B. Boychuk R.D. Bart D.H Crowell R.M. Di Mauro W.L. Nyhan 1981 Multiple carboxylase deficiency: clinical and biochemical improvement following neonatal biotin treatment Pediatrics 68 113 118
31. B. Woodward M. Frigg 1989 Dietary biotin requirements of young rainbow trout determined by weight gain, hepatic biotin concentration and maximal biotin-dependent enzyme activities in liver and white muscle J Nutr 119 54 60
32. J.A. Yoder G.W. Litman 2000 The zebrafish fth1, slc3a2, men1, pc, fgf3 and cycd1 genes define two regions of conserved synteny between linkage group 7 and human chromosome 11q13 Gene 261 235 242
33. J. Zempleni D.M. Mock 2000 Marginal biotin deficiency is teratogenic Proc Soc Exp Biol Med 223 14 21