Identification of quantitative trait loci for resistance to two species of root-lesion nematode (Pratylenchus thornei and P. neglectus) in wheat

Australian Journal of Agricultural Research

Volumn 56, Issue 4, 2005, Pages 345-352

  Zwart, R S ^a,b   Thompson, J P ^a   Godwin, I D ^b  

^a DEPARTMENT OF AGRICULTURE AND FISHERIES   (Australia)

^b UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Composite interval mapping; Doubled haploids; Synthetic hexaploid wheat

Indexed keywords

DISEASE RESISTANCE;

PRATYLENCHUS NEGLECTUS; PRATYLENCHUS THORNEI; TRITICUM AESTIVUM;

EID: 19744376358     PISSN: 00049409     EISSN: None     Source Type: Journal    
DOI: 10.1071/AR04223     Document Type: Article

References (38)

1. Bassam BJ, Caetano-Annollés G (1993) Silver staining of DNA in polyacrylamide gels. Applied Biochemistry and Biotechnology 42, 181-188.
2. Berry S (2002) INRA-Genoplante SSRs from Simon Berry. http://grain.jouy.inra.fr/ggpages/SSRclub/Berry/Berry.html
3. Breiman A, Graur D (1995) Wheat evolution. Israel Journal of Plant Sciences 43, 85-98.
4. Brennan JP, Murray GM (1998) 'Economic importance of wheat diseases in Australia.' (NSW Agriculture: Wagga Wagga, NSW)
5. Bryan GJ, Collins AJ, Stephenson P, Orry A, Smith JB, Gale MD ( 1997) Isolation and characterisation of microsatellites from hexaploid bread wheat. Theoretical and Applied Genetics 94, 557-563. doi: 10.1007/s001220050451
6. Campbell AW, Daggard G, Békés F, Pedler A, Sutherland MW, Appels R (2001) Targetting AFLP-DNA markers to specific traits and chromosome regions. Australian Journal of Agricultural Research 52, 1153-1161. doi: 10.1071/AR01028
7. Chagué V, Fahima T, Dahan A, Sun GL, Korol AB, Ronin YI, Grama A, Röder MS, Nevo E (1999) Isolation of microsatellite and RAPD markers flanking the Yr15 gene of wheat using NILs and bulked segregant analysis. Genome 42, 1050-1056. doi: 10.1139/gen-42-6-1050
8. Churchill GA, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138, 963-971.
9. Cregan P (2001) Preliminary BARC SSR maps and primer pair details. http://www.scab.org/pdfs/BARC_SSRs_011101.html
10. Eastwood RF, Lagudah ES, Appels R (1994) A directed search for DNA sequences tightly linked to cereal cyst nematode resistance genes in Triticum tauschii. Genome 37, 311-319.
11. Farsi M, Vanstone VA, Fisher JM, Rathjen AJ (1995) Genetic variation in resistance to Pratylenchus neglectus in wheat and triticales. Australian Journal of Experimental Agriculture 35, 597-602.
12. Gupta PK, Balyan HS, Edwards KJ, Isaac P, Korzun V, et al (2002) Genetic mapping of 66 new microsatellite (SSR) loci in bread wheat. Theoretical and Applied Genetics 105, 413-422. doi: 10.1007/s00122-002-0865-9
13. Guyomarc'h H, Sourdille P, Charmet G, Edwards KJ, Bernard M (2002) Characterisation of polymorphic microsatellites from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104, 1164-1172.
14. Huang XQ, Hasam SLK, Zeller FJ, Wenzel G, Mohler V (2000) Molecular mapping of the wheat powdery mildew resistance gene Pm24 and marker validation for molecular breeding. Theoretical and Applied Genetics 101, 407-414. doi: 10.1007/s001220051497
15. Kammholz SJ, Sutherland MW, Banks PM (1996) Improving the efficiency of haploid wheat production mediated by wide crossing. SABRAO Journal 28, 37-46.
16. Kosambi DD (1944) The estimation of map distances from recombination values. Annals of Eugenics 12, 172-175.
17. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174-181. doi: 10.1016/0888-7543(87)90010-3
18. Langridge P, Lagudah ES, Holton TA, Appels R, Sharp P, Chalmers KJ (2001) Trends in genetic and genome analyses in wheat: a review. Australian Journal of Agricultural Research 52, 1043-1077. doi: 10.1071/AR01082
19. Li WL, Faris JD, Chittoor JM, Leach JE, Hulbert SH, Liu DJ, Chen PD, Gill BS (1999) Genomic mapping of defense response genes in wheat. Theoretical and Applied Genetics 98, 226-233. doi: 10.1007/s001220051062
20. Manly KF, Elliott RW (1991) RI MANAGER, a microcomputer program for analysis of data from recombinant inbred strains. Genome 1, 123-126.
21. Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proceedings of the National Academy of Sciences of the USA 88, 9828-9832.
22. Pestsova E, Ganal MW, Röder MS (2000) Isolation and mapping of microsatellite markers specific for the D-genome of bread wheat. Genome 43, 689-697. doi: 10.1139/ gen-43-4-689
23. Prasad M, Varshney RK, Roy JK, Balyan HS, Gupta PK (2000) The use of microsatellites for detecting DNA polymorphism, genotype identification and genetic diversity in wheat. Theoretical and Applied Genetics 100, 584-592.
24. Röder MS, Korzun V, Wendehake K, Plaschke J, Tixier MH, Leroy P, Ganal MW (1998) A microsatellite map of wheat. Genetics 149, 2007-2023.
25. Rogowsky PM, Guidet FLY, Langridge P, Shepherd KW, Koebner RMD (1991) Isolation and characterisation of wheat-rye recombinants involving chromosome arm IDS of wheat. Theoretical and Applied Genetics 82, 537-544. doi: 10.1007/BF00226788
26. Rossi M, Goggin FL, Milligan SB, Kaloshian I, Ullman DE, Williamson VM (1998) The nematode resistance gene Mi of tomato confers resistance against the potato aphid. Proceedings of the National Academy of Sciences of the USA 95, 9750-9754. doi: 10.1073/pnas.95.17.9750
27. Stephenson P, Bryan G, Kirby J, Collins A, Devos K, Busso C, Gale M (1998) Fifty new microsatellite loci for the wheat genetic map. Theoretical and Applied Genetics 97, 946-949. doi: 10.1007/s001220050975
28. Takken FLW, Thomas CM, Joosten MHAJ, Golstein C, Westerink N, Hille J, Nijkamp HJJ, de Wit PJGM, Jones JDG (1999) A second gene at the tomato Cf-4 locus confers resistance to Cladosporium fulvum through recognition of a novel avirulence determinant. Plant Journal 20, 279-288.
29. Taylor S, Vanstone V, Ware AH, McKay AC, Szot D, Russ MH (1999) Measuring yield loss in cereals caused by root-lesion nematodes (Pratylenchus neglectus and P. thornei) with and without nematicide. Australian Journal of Agricultural Research 50, 617-622.
30. Thompson JP, Brennan PS, Clewett TG, Sheedy JG, Seymour NP ( 1999) Progress in breeding wheat for tolerance and resistance to root-lesion nematode (Pratylenchus thornei). Australasian Plant Pathology 28, 45-52.
31. Thompson JP, Clewett TG, O'Reilly MM (1993) Tolerance and resistance in wheat to Pratylenchus thornei. In 'Pratylenchus Workshop, 9th Biennial Conference of the Australasian Plant Pathology Society'. Hobart. pp. 36-41. (Australasian Plant Pathology Society: Hobart, Tas)
32. Thompson JP, Haak MI (1997) Resistance to root-lesion nematode (Pratylenchus thornei) in Aegilops tauschii Coss., the D-genome donor to wheat. Australian Journal of Agricultural Research 48, 553-559. doi: 10.1071/A96167
33. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, et al. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23, 4407-4414.
34. Wang S, Basten CJ, Zeng Z-B (2004) 'Windows QTL Cartographer 2.0.' (Department of Statistics, North Carolina State University: Raleigh, NC)
35. Williams KJ, Taylor SP, Bogacki P, Pallotta M, Bariana HS, Wallwork H (2002) Mapping of the root-lesion nematode (Pratylenchus neglectus) resistance gene Rlnn1 in wheat. Theoretical and Applied Genetics 104, 874-879. doi: 10.1007/s00122-001-0839-3
36. Williamson VM, Hussey RS (1996) Nematode pathogenesis and resistance in plants. The Plant Cell 8, 1735-1745. doi: 10.1105/tpc.8.10.1735
37. Zwart RS, Thompson JP, Godwin ID (2004a) Genetic analysis of resistance to root-lesion nematode (Pratylenchus thornei Sher and Allen) in wheat. Plant Breeding 123, 209-212. doi: 10.1111/j.1439-0523.2004.00986.x
38. Zwart RS, Thompson JP, Williamson PM, Seymour NP (2004b) Elite sources of resistance in wheat to root-lesion nematode (Pratylenchus thornei and Pratylenchus neglectus) and yellow spot (Pyrenophora tritici-repentis. In 'Proceedings of the 3rd Australasian Soilborne Diseases Symposium'. pp. 220. (South Australian Research and Development Institute: Adelaide, S. Aust.)