Homology modeling and docking study of cyclin-dependent kinase (CDK) 10

Bioorganic and Medicinal Chemistry Letters

Volumn 15, Issue 11, 2005, Pages 2851-2856

  Sun, Miao ^a   Li, Zesheng ^a   Zhang, Yuan ^a   Zheng, Qingchuan ^a   Sun, Chia Chung ^a  

^a JILIN UNIVERSITY   (China)

Author keywords

Cyclin dependent kinase; Docking; Molecular dynamics; Molecular modeling

Indexed keywords

ADENOSINE PHOSPHATE; ASPARTIC ACID; CYCLIN DEPENDENT KINASE; CYCLIN DEPENDENT KINASE 10; CYCLIN DEPENDENT KINASE 2; LYSINE; UNCLASSIFIED DRUG;

ANALYTIC METHOD; ARTICLE; CHEMICAL INTERACTION; CRYSTAL STRUCTURE; HYDROGEN BOND; LIGAND BINDING; MOLECULAR DYNAMICS; MOLECULAR MECHANICS; MOLECULAR MODEL; MOLECULAR STABILITY; PROTEIN PROTEIN INTERACTION; RELIABILITY; SEQUENCE HOMOLOGY; THREE DIMENSIONAL IMAGING;

AMINO ACID SEQUENCE; BINDING SITES; CYCLIN-DEPENDENT KINASES; HYDROGEN BONDING; LIGANDS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 19544374148     PISSN: 0960894X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bmcl.2005.03.088     Document Type: Article

References (33)

1. K. Mitch, E. Jessie, and M. Vincent Genome Biol. 9 2002 1 12
2. D.O. Morgan Annu. Rev. Cell Dev. Biol. 13 1997 261 291
3. L. Meijer A. Jezequel M. Roberge Progress in Cell Cycle Research: Editions "Life in Progress" Vol. 5 2003 Station Biologique deRoscoff 235 248
4. P.K. Vogt, and S.I. Reed Current Topics in Microbiology and Immunology 1998 Springer 169pp
5. N.P. Pavletich J. Mol. Biol. 287 1999 821 828
6. C. Norbury, and P. Nurse Annu. Rev. Biochem. 61 1992 441 470
7. J.W. Harper, and P.D. Adams Chem. Rev. 101 2001 2511 2526
8. C.J. Hengartner, V.E. Myer, and S.M. Liao Mol. Cell. 2 1998 43 53
9. H. Serizawa, T.P. Makela, and J.W. Conaway Nature 374 1995 280 282
10. J. Garriga, J. Peng, and M. Parreno Oncogene 17 1998 3093 3102
11. S. Akoulitchev, S. Chuikov, and D. Reinberg Nature 407 2000 102 106
12. P. Wei, M.E. Garber, and S.M. Fang Cell 92 1998 451 462
13. J.P. Tassan, M. Jaquenoud, and P. Leopold Proc. Natl. Acad. Sci. U.S.A. 92 1995 8871 8875
14. X. Grana, P.P. Claudio, and A. De Luca Oncogene 9 1994 2097 2103
15. R. Brambilla, and G. Draetta Oncogene 9 1994 3037 3041
16. S. Li, T.K. MacLachlan, and A. De Luca Cancer Res. 55 1995 3992 3995
17. J.C. Sergere, J.Y. Thuret, and G. Le Roux Biochem. Biophys. Res. Commun. 279 2000 738 739
18. M. Kasten, and A. Giordano Oncogene 20 2001 1832 1838
19. S. Singhal, K.M. Amin, and R. Kruklitis Cancer Biol. Ther. 2 2003 291 298
20. L.H. Lai Protein Structural Prediction and Molecular Design 467 1993 Beijing University Press pp 1-15
21. A.M. Lawrie, M.E. Noble, P. Tunnah, and J.A. Brown Nat. Struct. Biol. 4 1997 796
22. R. Luthy, J.U. Bowie, and D. Eisenberg Nature 356 1992 83 85
23. R.T. Kroemer, S.W. Doughty, and A.J. Robinson Protein Eng. 9 1996 493 498
24. A. Sali, and T.L. Blundell J. Mol. Biol. 234 1993 779 815
25. A. Sali, and J.P. Overington Protein Sci. 3 1994 1582 1596
26. A. Sali, L. Potterton, and F. Yuan Proteins 23 1995 318 326
27. A. Sali Curr. Opin. Biotechnol. 6 1995 437 451
28. Discover 3 User Guide, San Diego: MSI, USA, 1999
29. Affinity User Guide, San Diego: MSI, USA, 1999
30. J.W. Ponder, and F.M. Richards J. Mol. Biol. 193 1987 775 791
31. P. Sharma, P.J. Steinbach, M. Sharma, N.D. Amin, J.J. Barchi, and H.C. Pant JBC 274 1999 9600 9606
32. G.E. Schulz, and R.H. Schirmer Nature 250 1974 142 144
33. G.E. Schulz, E. Schiltz, A.G. Tomasselli, R. Frank, M. Brune, A. Wittinghofer, and R.H. Schirmer Eur. J. Biochem. 161 1986 127 132