-
1
-
-
14544289241
-
Accounting for uncertainty in the tree topology has little effect on the decision theoretic approach to model selection in phylogeny estimation
-
Z. Abdo, V. Minin, P. Joyce, and J. Sullivan Accounting for uncertainty in the tree topology has little effect on the decision theoretic approach to model selection in phylogeny estimation Mol. Biol. Evol. 22 2005 1 13
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1-13
-
-
Abdo, Z.1
Minin, V.2
Joyce, P.3
Sullivan, J.4
-
2
-
-
0036429958
-
Cryptic lineages in a small frog: The post-glacial history of the spring peeper, Pseudacris crucifer (Anura: Hylidae)
-
J.D. Austin, S.C. Lougheed, L. Neidrauer, A.A. Chek, and P.T. Boag Cryptic lineages in a small frog: the post-glacial history of the spring peeper, Pseudacris crucifer (Anura: Hylidae) Mol. Phylogenet. Evol. 25 2002 316 329
-
(2002)
Mol. Phylogenet. Evol.
, vol.25
, pp. 316-329
-
-
Austin, J.D.1
Lougheed, S.C.2
Neidrauer, L.3
Chek, A.A.4
Boag, P.T.5
-
3
-
-
0032557042
-
Pleistocene phylogeographic effects on avian populations and the speciation process
-
J.C. Avise, and D. Walker Pleistocene phylogeographic effects on avian populations and the speciation process Proc. R. Soc. Lond. B 265 1998 457 463
-
(1998)
Proc. R. Soc. Lond. B
, vol.265
, pp. 457-463
-
-
Avise, J.C.1
Walker, D.2
-
4
-
-
0001128008
-
The northwestern U.S. during deglaciation; Vegetational history and paleoclimatic implications
-
W.F. Ruddiman H.E. Wright Jr. The Geological Society of America Boulder
-
C.W. Barnosky, P.M. Anderson, and P.J. Bartlein The northwestern U.S. during deglaciation; vegetational history and paleoclimatic implications W.F. Ruddiman H.E. Wright Jr. North America and Adjacent Oceans During the Last Deglaciation 1987 The Geological Society of America Boulder 289 321
-
(1987)
North America and Adjacent Oceans during the Last Deglaciation
, pp. 289-321
-
-
Barnosky, C.W.1
Anderson, P.M.2
Bartlein, P.J.3
-
5
-
-
0002171429
-
Timing and processes of deglaciation along the southern margin of the Cordilleran ice sheet
-
W.F. Ruddiman H.E. Wright Jr. The Geological Society of America Boulder
-
D.B. Booth Timing and processes of deglaciation along the southern margin of the Cordilleran ice sheet W.F. Ruddiman H.E. Wright Jr. North America and Adjacent Oceans During the Last Deglaciation 1987 The Geological Society of America Boulder 71 90
-
(1987)
North America and Adjacent Oceans during the Last Deglaciation
, pp. 71-90
-
-
Booth, D.B.1
-
7
-
-
9644272771
-
Testing nested phylogenetic and phylogeographic hypotheses in the Plethodon vandykei species group
-
B.C. Carstens, A.L. Stevenson, J.D. Degenhardt, and J. Sullivan Testing nested phylogenetic and phylogeographic hypotheses in the Plethodon vandykei species group Syst. Biol. 53 2004 781 792
-
(2004)
Syst. Biol.
, vol.53
, pp. 781-792
-
-
Carstens, B.C.1
Stevenson, A.L.2
Degenhardt, J.D.3
Sullivan, J.4
-
8
-
-
12444323629
-
Accounting for coalescent stochasticity in testing phylogeographic hypotheses: Modeling pleistocene population structure in the Idaho Giant Salamander Dicamptodon aterrimus
-
B.C. Carstens, J.D. Degenhardt, A.L. Stevenson, and J. Sullivan Accounting for coalescent stochasticity in testing phylogeographic hypotheses: modeling pleistocene population structure in the Idaho Giant Salamander Dicamptodon aterrimus Mol. Ecol. 14 2005 255 265
-
(2005)
Mol. Ecol.
, vol.14
, pp. 255-265
-
-
Carstens, B.C.1
Degenhardt, J.D.2
Stevenson, A.L.3
Sullivan, J.4
-
9
-
-
0037296626
-
Evidence for multiple Pleistocene refugia in the postglacial expansion of the eastern tiger salamander, Ambystoma tigrinum tigrinum
-
S.A. Church, J.M. Kraus, J.C. Mitchell, D.R. Church, and D.R. Taylor Evidence for multiple Pleistocene refugia in the postglacial expansion of the eastern tiger salamander, Ambystoma tigrinum tigrinum Evolution 57 2003 372 383
-
(2003)
Evolution
, vol.57
, pp. 372-383
-
-
Church, S.A.1
Kraus, J.M.2
Mitchell, J.C.3
Church, D.R.4
Taylor, D.R.5
-
10
-
-
84963034960
-
Deep-history biogeography: Retrieving the historical pattern of evolving biotas
-
J. Cracraft Deep-history biogeography: retrieving the historical pattern of evolving biotas Syst. Zool. 37 1988 221 236
-
(1988)
Syst. Zool.
, vol.37
, pp. 221-236
-
-
Cracraft, J.1
-
11
-
-
0038814864
-
Testing Pleistocene refugia theory: Phylogeographic analysis of Desmognathus wrighti, a high-elevation salamander in the southern Appalachians
-
E.J. Crespi, L.J. Rissler, and R.A. Browne Testing Pleistocene refugia theory: phylogeographic analysis of Desmognathus wrighti, a high-elevation salamander in the southern Appalachians Mol. Ecol. 12 2003 969 984
-
(2003)
Mol. Ecol.
, vol.12
, pp. 969-984
-
-
Crespi, E.J.1
Rissler, L.J.2
Browne, R.A.3
-
12
-
-
0002536269
-
Plant geography of Idaho
-
R.J. Davis Brigham Young University Press Provo
-
R. Daubenmire Plant geography of Idaho R.J. Davis Flora of Idaho 1952 Brigham Young University Press Provo 1 17
-
(1952)
Flora of Idaho
, pp. 1-17
-
-
Daubenmire, R.1
-
13
-
-
0005901264
-
Systematic implications of geographic pattern of genetic variation in the genus Dicamptodon
-
C.H. Daugherty, F.W. Allendorf, W.W. Dunlap, and K.L. Knudsen Systematic implications of geographic pattern of genetic variation in the genus Dicamptodon Copeia 1983 1983 679 691
-
(1983)
Copeia
, vol.1983
, pp. 679-691
-
-
Daugherty, C.H.1
Allendorf, F.W.2
Dunlap, W.W.3
Knudsen, K.L.4
-
14
-
-
0001016986
-
Paleoclimates, paleovegetation, and paleofloras during the late Quaternary
-
Flora of North America Editorial Committee (Eds.) Oxford University Press, New York
-
Delcourt, P.A., Delcourt, H.R., 1993. Paleoclimates, paleovegetation, and paleofloras during the late Quaternary. In: Flora of North America Editorial Committee (Eds.), Flora of North America. Oxford University Press, New York, pp. 71-94
-
(1993)
Flora of North America
, pp. 71-94
-
-
Delcourt, P.A.1
Delcourt, H.R.2
-
15
-
-
0035023189
-
Phylogeography of the dusky shrew, Sorex monticolus (Insectivora, Soricidae): Insight into deep and shallow history in northwestern North America
-
J.R. Demboski, and J.A. Cook Phylogeography of the dusky shrew, Sorex monticolus (Insectivora, Soricidae): insight into deep and shallow history in northwestern North America Mol. Ecol. 10 2001 1227 1240
-
(2001)
Mol. Ecol.
, vol.10
, pp. 1227-1240
-
-
Demboski, J.R.1
Cook, J.A.2
-
16
-
-
0033823295
-
Biogeography of the southeastern United States: A comparison of salamander phylogeographic studies
-
M.F. Donovan, R.D. Semlitsch, and E.J. Routman Biogeography of the southeastern United States: a comparison of salamander phylogeographic studies Evolution 54 2000 1449 1456
-
(2000)
Evolution
, vol.54
, pp. 1449-1456
-
-
Donovan, M.F.1
Semlitsch, R.D.2
Routman, E.J.3
-
17
-
-
0002419458
-
Gymnophiona, Caudata
-
P. Wellnhofer Gustav-Fisher-Verlag Stuttgart and New York
-
R. Estes Gymnophiona, Caudata P. Wellnhofer Handbuch der Paläoherpetologie, Part 2 1981 Gustav-Fisher-Verlag Stuttgart and New York 1 115
-
(1981)
Handbuch der Paläoherpetologie, Part 2
, pp. 1-115
-
-
Estes, R.1
-
18
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
J. Felsenstein Confidence limits on phylogenies: an approach using the bootstrap Evolution 39 1985 783 791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
19
-
-
0024152983
-
Phylogenies from molecular sequences: Inference and reliability
-
J. Felsenstein Phylogenies from molecular sequences: inference and reliability Annu. Rev. Genet. 22 1988 521 565
-
(1988)
Annu. Rev. Genet.
, vol.22
, pp. 521-565
-
-
Felsenstein, J.1
-
20
-
-
0001162892
-
Hybridization and cryptic species in Dicamptodon (Caudata: Dicamptodontidae)
-
D.A. Good Hybridization and cryptic species in Dicamptodon (Caudata: Dicamptodontidae) Evolution 43 1989 728 744
-
(1989)
Evolution
, vol.43
, pp. 728-744
-
-
Good, D.A.1
-
21
-
-
0002754117
-
History of the vegetation: Cretaceous (Maastrichtian)-tertiary
-
Flora of North America Editorial Committee (Eds.), Oxford University Press, New York
-
Graham, A., 1993. History of the vegetation: Cretaceous (Maastrichtian)-tertiary. In: Flora of North America Editorial Committee (Eds.), Flora of North America. Oxford University Press, New York, pp. 57-70
-
(1993)
Flora of North America
, pp. 57-70
-
-
Graham, A.1
-
22
-
-
0029666939
-
Post-glacial range fluctuation, genetic subdivision an speciation in the western North American spotted frog complex, Rana pretiosa
-
D.M. Green, T.F. Sharbel, J. Kearsley, and H. Kaiser Post-glacial range fluctuation, genetic subdivision an speciation in the western North American spotted frog complex, Rana pretiosa Evolution 50 1996 374 390
-
(1996)
Evolution
, vol.50
, pp. 374-390
-
-
Green, D.M.1
Sharbel, T.F.2
Kearsley, J.3
Kaiser, H.4
-
23
-
-
0034849408
-
MrBayes: Bayesian inference of phylogenetic trees
-
J.P. Huelsenbeck, and F. Ronquist MrBayes: Bayesian inference of phylogenetic trees Bioinformatics 17 2001 754 755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
24
-
-
0036806280
-
Potential applications and pitfalls of Bayesian inference of phylogeny
-
J.P. Huelsenbeck, B. Lagret, R.E. Miller, and F. Ronquist Potential applications and pitfalls of Bayesian inference of phylogeny Syst. Biol. 51 2002 673 688
-
(2002)
Syst. Biol.
, vol.51
, pp. 673-688
-
-
Huelsenbeck, J.P.1
Lagret, B.2
Miller, R.E.3
Ronquist, F.4
-
25
-
-
0035043359
-
Did the Pleistocene glaciations promote divergence. Tests of explicit refugial models in montane grasshoppers
-
L.L. Knowles Did the Pleistocene glaciations promote divergence. Tests of explicit refugial models in montane grasshoppers Mol. Ecol. 10 2001 691 701
-
(2001)
Mol. Ecol.
, vol.10
, pp. 691-701
-
-
Knowles, L.L.1
-
26
-
-
0000831631
-
A molecular perspective on the evolutionary relationships of the salamander families
-
A. Larson A molecular perspective on the evolutionary relationships of the salamander families Evol. Biol. 25 1991 211 277
-
(1991)
Evol. Biol.
, vol.25
, pp. 211-277
-
-
Larson, A.1
-
27
-
-
0000909790
-
Phylogenetic relationships of the salamander families: A analysis of congruence among morphological and molecular characters
-
A. Larson, and W.W. Dimmick Phylogenetic relationships of the salamander families: a analysis of congruence among morphological and molecular characters Herpetol. Monogr. 7 1993 77 93
-
(1993)
Herpetol. Monogr.
, vol.7
, pp. 77-93
-
-
Larson, A.1
Dimmick, W.W.2
-
28
-
-
0038614512
-
Natural history of the Californian mountain kingsnake Lampropeltis zonata
-
H.F. De Lisle P.R. Brown B. Kaufman B.M. McGurty Southwestern Herpetologists Society Van Nuys
-
B.M. McGurty Natural history of the Californian mountain kingsnake Lampropeltis zonata H.F. De Lisle P.R. Brown B. Kaufman B.M. McGurty Proceedings of the Conference on California Herpetology 1988 Southwestern Herpetologists Society Van Nuys 73 88
-
(1988)
Proceedings of the Conference on California Herpetology
, pp. 73-88
-
-
McGurty, B.M.1
-
29
-
-
0242487488
-
Performance-based selection of likelihood models for phylogeny estimation
-
V. Minin, Z. Abdo, P. Joyce, and J. Sullivan Performance-based selection of likelihood models for phylogeny estimation Syst. Biol. 52 2003 674 683
-
(2003)
Syst. Biol.
, vol.52
, pp. 674-683
-
-
Minin, V.1
Abdo, Z.2
Joyce, P.3
Sullivan, J.4
-
30
-
-
0035104632
-
Phylogeography of the tailed frog (Ascaphus truei): Implications for the biogeography of the Pacific Northwest
-
M. Neilson, K. Lohman, and J. Sullivan Phylogeography of the tailed frog (Ascaphus truei): implications for the biogeography of the Pacific Northwest Evolution 55 2001 147 160
-
(2001)
Evolution
, vol.55
, pp. 147-160
-
-
Neilson, M.1
Lohman, K.2
Sullivan, J.3
-
31
-
-
0012209168
-
Dicamptodon copei, n. sp., from the Pacific Northwest, U.S.A. (Amphibia: Caudata: Ambystomatidae)
-
R.A. Nussbaum Dicamptodon copei, n. sp., from the Pacific Northwest, U.S.A. (Amphibia: Caudata: Ambystomatidae) Copeia 1970 1970 506 514
-
(1970)
Copeia
, vol.1970
, pp. 506-514
-
-
Nussbaum, R.A.1
-
33
-
-
0002351005
-
Trackways of living and fossil salamanders from the Paleocene of Montana
-
F.E. Peabody Trackways of living and fossil salamanders from the Paleocene of Montana J. Paleontol. 28 1954 79 83
-
(1954)
J. Paleontol.
, vol.28
, pp. 79-83
-
-
Peabody, F.E.1
-
35
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
D. Posada, and K.A. Crandall Modeltest: Testing the model of DNA substitution Bioinformatics 14 1998 817 818
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
36
-
-
84958640919
-
The Cordilleran ice sheet of the northern Rocky Mountains and related Quaternary history
-
H.E. Wright Jr. D.G. Frey Princeton University Press Princeton
-
G.M. Richmond, R. Fryxell, G.E. Neff, and P.L. Weis The Cordilleran ice sheet of the northern Rocky Mountains and related Quaternary history H.E. Wright D.G. Frey The Quaternary of the United States 1965 Princeton University Press Princeton 231 242
-
(1965)
The Quaternary of the United States
, pp. 231-242
-
-
Richmond, G.M.1
Fryxell, R.2
Neff, G.E.3
Weis, P.L.4
-
37
-
-
0029669291
-
The molecular phylogeographic bridge between deep and shallow history in continental biotas
-
B.R. Riddle The molecular phylogeographic bridge between deep and shallow history in continental biotas Trends Ecol. Evol. 11 1996 207 211
-
(1996)
Trends Ecol. Evol.
, vol.11
, pp. 207-211
-
-
Riddle, B.R.1
-
40
-
-
0030956877
-
Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America
-
D.E. Soltis, M.A. Gitzendanner, D.D. Strenge, and P.S. Soltis Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America Plant Syst. Evol. 206 1997 353 373
-
(1997)
Plant Syst. Evol.
, vol.206
, pp. 353-373
-
-
Soltis, D.E.1
Gitzendanner, M.A.2
Strenge, D.D.3
Soltis, P.S.4
-
41
-
-
0037286866
-
Molecular systematics, phylogeography, and the effects of Pleistocene glaciation in the painted turtle (Chrysemys picta) complex
-
D.E. Starkey, H.B. Shaffer, R.L. Burke, M.R.J. Forstner, J.B. Iverson, F.J. Janzen, A.G.J. Rhodin, and G.R. Ultsch Molecular systematics, phylogeography, and the effects of Pleistocene glaciation in the painted turtle (Chrysemys picta) complex Evolution 57 2003 119 128
-
(2003)
Evolution
, vol.57
, pp. 119-128
-
-
Starkey, D.E.1
Shaffer, H.B.2
Burke, R.L.3
Forstner, M.R.J.4
Iverson, J.B.5
Janzen, F.J.6
Rhodin, A.G.J.7
Ultsch, G.R.8
-
42
-
-
0034088920
-
Mitochondrial sequences analysis of Salamandra taxa suggests old splits of major lineages and postglacial recolonization of Central Europe from distinct source populations of Salamadra salamandra
-
S. Steinfartz, M. Veith, and D. Tautz Mitochondrial sequences analysis of Salamandra taxa suggests old splits of major lineages and postglacial recolonization of Central Europe from distinct source populations of Salamadra salamandra Mol. Ecol. 9 2000 397 410
-
(2000)
Mol. Ecol.
, vol.9
, pp. 397-410
-
-
Steinfartz, S.1
Veith, M.2
Tautz, D.3
-
43
-
-
0034091330
-
Comparative phylogeography of Mesoamerican highland rodents: Concerted versus independent responses to past climatic fluctuations
-
J. Sullivan, E. Arellano, and D.S. Rogers Comparative phylogeography of Mesoamerican highland rodents: concerted versus independent responses to past climatic fluctuations Am. Nat. 155 2000 755 768
-
(2000)
Am. Nat.
, vol.155
, pp. 755-768
-
-
Sullivan, J.1
Arellano, E.2
Rogers, D.S.3
-
45
-
-
0003398978
-
Comments on the osteology and phylogeny of ambystomatid salamanders: Bulletin of the Florida State Museum
-
J.A. Tihen Comments on the osteology and phylogeny of ambystomatid salamanders: Bulletin of the Florida State Museum Biol. Sci. 3 1958 1 50
-
(1958)
Biol. Sci.
, vol.3
, pp. 1-50
-
-
Tihen, J.A.1
-
46
-
-
84958655239
-
The quaternary of the Pacific Mountains System in California
-
H.E. Wright Jr. D.G. Frey Princeton University Press Princeton
-
C. Wahrhaftig, and J.H. Birman The quaternary of the Pacific Mountains System in California H.E. Wright Jr. D.G. Frey The Quaternary of the United States 1965 Princeton University Press Princeton 299 340
-
(1965)
The Quaternary of the United States
, pp. 299-340
-
-
Wahrhaftig, C.1
Birman, J.H.2
-
47
-
-
0020898116
-
The Cordilleran ice sheet in Washington, Idaho, and Montana
-
H.E. Wright Jr. S.C. Porter University of Minnesota Press Minneapolis
-
R.B. Waitt, and R.M. Thorson The Cordilleran ice sheet in Washington, Idaho, and Montana H.E. Wright Jr. S.C. Porter Late Quaternary Environments of the United States, the Late Pleistocene 1983 University of Minnesota Press Minneapolis 53 70
-
(1983)
Late Quaternary Environments of the United States, the Late Pleistocene
, pp. 53-70
-
-
Waitt, R.B.1
Thorson, R.M.2
-
48
-
-
0043198532
-
Historical isolation, range expansion, and secondary contact of two highly divergent mitochondrial lineages in spotted salamanders (Ambystoma maculatum)
-
K.R. Zamudio, and W.K. Savage Historical isolation, range expansion, and secondary contact of two highly divergent mitochondrial lineages in spotted salamanders (Ambystoma maculatum) Evolution 57 2003 1631 1652
-
(2003)
Evolution
, vol.57
, pp. 1631-1652
-
-
Zamudio, K.R.1
Savage, W.K.2
-
49
-
-
6744259393
-
Pattern variation and evolution of the mountain kingsnake, Lampropeltis zonata
-
R.G. Zweifel Pattern variation and evolution of the mountain kingsnake, Lampropeltis zonata Copeia 1952 1952 152 168
-
(1952)
Copeia
, vol.1952
, pp. 152-168
-
-
Zweifel, R.G.1
|