Isolation of genes differentially expressed during the fruit body development of Pleurotus ostreatus by differential display of RAPD

FEMS Microbiology Letters

Volumn 246, Issue 2, 2005, Pages 279-284

  Sunagawa, Masahide ^a   Magae, Yumi ^a  

^a FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

Author keywords

Differential display; Pleurotus ostreatus; RAPD

Indexed keywords

COMPLEMENTARY DNA; DNA FRAGMENT; MESSENGER RNA; METHYLTRANSFERASE; TRIACYLGLYCEROL LIPASE;

ARTICLE; CONTROLLED STUDY; DATA BASE; DEVELOPMENTAL STAGE; DIFFERENTIAL DISPLAY; FUNGAL DEVELOPMENT; FUNGAL GENETICS; GENE AMPLIFICATION; GENE EXPRESSION; GENE ISOLATION; GENETIC ANALYSIS; MOLECULAR CLONING; MYCELIUM; NONHUMAN; NORTHERN BLOTTING; NUCLEOTIDE SEQUENCE; PLEUROTUS OSTREATUS; POLYMERASE CHAIN REACTION; PRIMORDIUM; PRIORITY JOURNAL; RANDOM AMPLIFIED POLYMORPHIC DNA; SEQUENCE ANALYSIS; STATISTICAL SIGNIFICANCE;

FRUITING BODIES, FUNGAL; FUNGAL PROTEINS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; MOLECULAR SEQUENCE DATA; PLEUROTUS; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SEQUENCE ANALYSIS, DNA;

FUNGI; PLEUROTUS OSTREATUS;

EID: 19444365827     PISSN: 03781097     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsle.2005.04.018     Document Type: Article

References (29)

1. R.P. Boulianne, Y. Liu, M. Aebi, B.C. Lu, and U. Kues Fruiting body development in Coprinus cinereus: regulated expression of two galectins secreted by a non-classical pathway Microbiology 146 2000 1841 1853
2. T. Kamada Molecular genetics of sexual development in the mushroom Coprinus cinereus Bioessays 24 2002 449 459
3. J.S. Horton, G.E. Palmer, and W.J. Smith Regulation of dikaryon-expressed genes by FRT1 in the basidiomycete Schizophyllum commune Fungal Genet. Biol. 26 1999 33 47
4. F.H. Schuren, S.A. Asgeirsdottir, E.M. Kothe, J.M. Scheer, and J.G. Wessels The Sc7/Sc14 gene family of Schizophyllum commune codes for extracellular proteins specifically expressed during fruit-body formation J. Gen. Microbiol. 139 1993 2083 2090
5. I. Lacourt, S. Duplessis, S. Abba, P. Bonfante, and F. Martin Isolation and characterization of differentially expressed genes in the mycelium and fruit body of Tuber borchii Appl. Environ. Microbiol. 68 2002 4574 4582
6. S. Zeppa, C. Guidi, A. Zambonelli, L. Potenza, L. Vallorani, R. Pierleoni, C. Sacconi, and V. Stocchi Identification of putative genes involved in the development of Tuber borchii fruit body by mRNA differential display in agarose gel Curr. Genet. 42 2002 161 168
7. P.W. De Groot, P.J. Schaap, L.J. Van Griensven, and J. Visser Isolation of developmentally regulated genes from the edible mushroom Agaricus bisporus Microbiology 143 1997 1993 2001
8. P. Sirand-Pugnet, and J. Labarere Molecular characterization of the Pri3 gene encoding a cysteine-rich protein, specifically expressed during fruiting initiation within the Agrocybe aegerita complex Curr. Genet. 41 2002 31 42
9. T. Hirano, T. Sato, and H. Enei Isolation of genes specifically expressed in the fruit body of the edible basidiomycete Lentinula edodes Biosci. Biotechnol. Biochem. 68 2004 468 472
10. S. Kajiwara, K. Yamaoka, K. Hori, H. Miyazawa, T. Saito, T. Kanno, and K. Shishido Isolation and sequence of a developmentally regulated putative novel gene, priA, from the basidiomycete Lentinus edodes Gene 114 1992 173 178
11. G.S. Leung, M. Zhang, W.J. Xie, and H.S. Kwan Identification by RNA fingerprinting of genes differentially expressed during the development of the basidiomycete Lentinula edodes Mol. Gen. Genet. 262 2000 977 990
12. H. Nishizawa, Y. Miyazaki, S. Kaneko, and K. Shishido Distribution of hydrophobin 1 gene transcript in developing fruiting bodies of Lentinula edodes Biosci. Biotechnol. Biochem. 66 2002 1951 1954
13. W.L. Ng, T.P. Ng, and H.S. Kwan Cloning and characterization of two hydrophobin genes differentially expressed during fruit body development in Lentinula edodes FEMS Microbiol. Lett. 185 2000 139 145
14. A. Ando, A. Harada, K. Miura, and Y. Tamai A gene encoding a hydrophobin, fvh1, is specifically expressed after the induction of fruit in the edible mushroom Flammulina velutipes Curr. Genet. 39 2001 190 197
15. S.H. Lee, B.G. Kim, K.J. Kim, J.S. Lee, D.W. Yun, J.H. Hahn, G.H. Kim, K.H. Lee, D.S. Suh, S.T. Kwon, C.S. Lee, and Y.B. Yoo Comparative analysis of sequences expressed during the liquid-cultured mycelia and fruit body stages of Pleurotus ostreatus Fungal Genet. Biol. 35 2002 115 134
16. P. Liang, and A.B. Pardee Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction Science 257 1992 967 971
17. S. Stein, Y.J. Cho, R.S. Jackson, and P. Liang Identification of p53 target genes by fluorescent differential display Methods Mol. Biol. 234 2003 51 63
18. A. Ueda, W. Shi, T. Nakamura, and T. Takabe Analysis of salt-inducible genes in barley roots by differential display J. Plant Res. 115 2002 119 130
19. L.M. Wu, Z.F. Ni, F.R. Meng, Z. Lin, and Q.X. Sun Cloning and characterization of leaf cDNAs that are differentially expressed between wheat hybrids and their parents Mol. Genet. Genomics. 270 2003 281 286
20. M. Sunagawa, Y. Tamai, H. Neda, K. Miyazaki, and K. Miura Application of random amplified polymorphic DNA (RAPD) markers (I): analyses of fussants in edible mushrooms Nihon Mokuzai Gakkaishi 41 1995 945 948
21. S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. Lipman Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 1997 3389 3402
22. T.J. White, T. Bruns, S. Lee, and J. Taylor Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics M.A. Innis D.H. Gelfand J.J. Sninsky T.J. White PCR protocols 1990 Academic Press San Diego, CA 315 322
23. M. Goodrich-Tanrikulu, K. Howe, A. Stafford, and M.A. Nelson Changes in fatty acid composition of Neurospora crassa accompany sexual development and ascospore germination Microbiology 144 1998 1713 1720
24. E. Thines, R.W. Weber, and N.J. Talbot MAP kinase and protein kinase A-dependent mobilization of triacylglycerol and glycogen during appressorium turgor generation by Magnaporthe grisea Plant Cell 12 2000 1703 1718
25. G.F. Gibbons, K. Islam, and R.J. Pease Mobilisation of triacylglycerol stores Biochim. Biophys. Acta 1483 2000 37 57
26. H. Muraguchi, and T. Kamada A mutation in the elen2 gene encoding a chtochrome P450 of Coprinus cinereus affects mushroom morphogenesis Fungal Genet. Biol. 29 2000 49 59
27. M.M. Penas, S.A. Asgeirsdottir, I. Lasa, F.A. Culianez-Macia, A.G. Pisabarro, J.G. Wessels, and L. Ramirez Identification, characterization, and In situ detection of a fruit-body-specific hydrophobin of Pleurotus ostreatus Appl. Environ. Microbiol. 64 1998 4028 4034
28. S.A. Asgeirsdottir, O.M. de Vries, and J.G. Wessels Identification of three differentially expressed hydrophobins in Pleurotus ostreatus (oyster mushroom) Microbiology 144 1998 2961 2969
29. J.M.H. Stoop, and H. Mooibroek Advances in genetic analysis and biotechnology of the cultivated button mushroom, Agaricus bisporus Appl. Microbiol. Biotechnol. 52 1999 474 483