Phylogenetic position of Salmo (Platysalmo) platycephalus Behnke 1968 from south-central Turkey, evidenced by genetic data

Journal of Fish Biology

Volumn 64, Issue 4, 2004, Pages 947-960

  Susnik S ^a   Schoffmann J ^b   Snoj, A ^c  

^a AGRICULTURAL INSTITUTE OF SLOVENIA   (Slovenia)

^b Department of Animal Science ^*  (Austria)

^c UNIVERSITY OF LJUBLJANA   (Slovenia)

Author keywords

Archaic trout; ITS1; mtDNA; Salmo trutta; Taxonomy; Turkey

Indexed keywords

PHYLOGENETICS; SALMONID; TAXONOMY;

EURASIA; TURKEY;

AVES; KATHETOSTOMA GIGANTEUM; MELEAGRIS GALLOPAVO; PLATYCEPHALUS; SALMO; SALMO OBTUSIROSTRIS; SALMO PLATYCEPHALUS; SALMO SALAR; SALMO TRUTTA; SALMONIDAE;

EID: 1942489663     PISSN: 00221112     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2004.0363.x     Document Type: Article

References (32)

1. Behnke, R. J. (1968). A new subgenus and species of trout Salmo (Platysalmo) platycephalus, from south-central Turkey with comments on the classification of the subfamily Salmoninae. Mitteilungen aus dem Hamburgischen Museum und Institut 66, 1-15.
2. Bernatchez, L. (2001). The evolutionary history of brown trout (Salmo trutta L.) inferred from phylogeographic, nested clade, and mismatch analyses of mitochondrial DNA variation. Evolution 55, 351-379.
3. Bernatchez, L. & Danzmann, R. G. (1993). Congruence in control-region sequence and restriction-site variation in mitochondrial DNA of brook charr (Salvelinus fontinalis Mitchill). Molecular Biology and Evolution 10, 1002-1014.
4. Bernatchez, L., Guyomard, R. & Bonhomme, F. (1992). DNA variation of the mitochondrial control region among geographically and morphologically remote European brown trout Salmo trutta populations. Molecular Ecology 1, 161-173.
5. Berrebi, P., Povž, M., Jesenšek, D., Cattaneo-Berrebi, G. & Crivelli, A. J. (2000). The genetic diversity of native, stocked and hybrid populations of marble trout in the Soca river, Slovenia. Heredity 85, 277-287.
6. Crivelli, A., Poizat, G., Berrebi, P., Jesenšek, P. & Rubin, J. F. (2000). Conservation biology applied to fish: the example of a project for rehabilitating the marble trout (Salmo marmoratus) in Slovenia. Cybium 24, 211-230.
7. Cronin, M. A., Spearman, W. J. & Wilmot, R. L. (1993). Mitochondrial variation in Chinook (Oncorhynchus tsawytscha) and Chum salmon (O. keta) detected by restriction enzyme analysis of Polymerase Chain Reaction (PCR) products. Canadian Journal of Fisheries and Aquatic Sciences 50, 708-715.
8. Delling, B. (2003). Species diversity and phylogeny of Salmo with emphasis on southern trouts (Teleostei, Salmonidae). Doctoral dissertation, Department of Zoology, Stockholm University.
9. Delling, B., Crivelli, A. J., Rubin, J. F. & Berrebi, P. (2000). Morphological variation in hybrids between Salmo marmoratus and alien Salmo species in the Volarja stream, Soca River basin, Slovenia. Journal of Fish Biology 57, 1199-1212. doi: 10.1006/jfbi.2000.1383.
10. Ekingen, G. (1976). Morphological characters of some Turkish trouts. Firat Üniversitesi Veteriner Fakültesi Dergesi 3, 98-104.
11. Falconer, D. S. (1981). Small populations. In Introduction to Quantitative Genetics (Falconer, D. S., ed.), pp. 46-76. London: Longman.
12. Felsenstein, J. (1993). PHYLIP (Phylogeny Inference Package) Version 3.5. Seattle, WA: Department of Genetics, SK-50, University of Washington.
13. Ferguson, A. & Taggart, J. B. (1991). Genetic differentiation among the sympatric brown trout (Salmo trutta) populations of Lough Melvin, Ireland. Biological Journal of the Linnean Society 43, 221-237.
14. Fumagalli, L., Snoj, A., Jesenšek, D., Balloux, F., Jug, T., Duron, O., Brossier, F., Crivelli, A. J. & Berrebi, P. (2002). Extreme genetic differentiation among the remnant populations of marble trout (Salmo marmoratus) in Slovenia. Molecular Ecology 11, 2711-2716.
15. Giuffra, E., Bernatchez, L. & Guyomard, R. (1994). Mitochondrial control region and protein coding genes sequence variation among phenotypic forms of brown trout Salmo trutta from northern Italy. Molecular Ecology 3, 161-71.
16. Hasegawa, M., Kishino, H. & Yano, K. (1985). Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22, 160-174.
17. Hynes, R. A., Ferguson, A. & McCann, M. A. (1996). Variation in mitochondrial DNA and post-glacial colonization of north western Europe by brown trout. Journal of Fish Biology 48, 54-67.
18. Kimura, M. (1980). A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 11-120.
19. Kottelat, M. (1997). European freshwater fishes: An heuristic checklist of the freshwater fishes of Europe (exclusive of former USSR), with an introduction for non-systematists and comments on nomenclature and conservation. Biologia 52 (Suppl. 5), 1-271.
20. Oakley, T. H. & Phillips, R. B. (1999). Phylogeny of salmonine fishes based on growth hormone introns: Atlantic (Salmo) and Pacific (Oncorhynchus) salmon are not sister taxa. Molecular Phylogenetics and Evolution 11, 381-93.
21. Patarnello, T., Bargelloni, L., Caldara, F. & Colombo, L. (1994). Cytochrome b and 16S rRNA sequence variation in the Salmo trutta (Salmonidae, Teleostei) species complex. Molecular Phylogenetics and Evolution 3, 69-74.
22. Phillips, R. P., Matsuoka, M. P., Konon, I. & Reed, K. M. (2000). Phylogenetic analysis of mitochondrial and nuclear sequences supports inclusion of Acantholingua ohridana in the genus Salmo. Copeia 2000, 546-550.
23. Presa, P., Pardo, B. G., Martínez, P. & Bernatchez, L. (2002). Phylogeographic congruence between mtDNA and rDNA ITS markers in brown trout. Molecular Biology and Evolution 19, 2161-2175.
24. Ryman, N., Allendorf, F. W. & Stahl, G. (1979). Reproductive isolation with little genetic divergence in sympatric populations of brown trout (Salmo trutta). Genetics 92, 247-262.
25. Schöffmann, J. (1992). Erste Lebendbeobachtung von Salmo (Platysalmo) platycephalus. Österreichs Fischerei 45, 11-18.
26. Skaala, Ø. & Solberg, G. (1997). Biochemical genetic variability and taxonomy of marmorated salmonid in river Ottra, Norway. Nordic Journal of Freshwater Research 73, 3-12.
27. Snoj, A., Jug, T., Melkič, E., Sušnik, S., Jesenšek, D., Budihna, N., Pohar, J. & Dovč, P. (2000). Mitochondrial and microsatellite DNA analysis of marble trout in Slovenia. Journal of Freshwater Biology (Quaderni ETP) 29, 5-11.
28. Snoj, A., Melkič, E., Sušnik, S., Muhamedagić, S. & Dovč, P. (2002). DNA phylogeny supports revised classification of Salmothymus obtusirostris. Biological Journal of the Linnean Society 77, 399-411.
29. Stearley, R. F. & Smith, G. R. (1993). Phylogeny of the pacific trouts and salmons (Oncorhynchus) and genera of the family Salmonidae. Transactions of the American Fisheries Society 122, 1-33.
30. Strimmer, K. & von Haeseler, A. (1996). Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Molecular Biology and Evolution 13, 964-969.
31. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4637-80.
32. IUCN (2003). 2003 IUCN Red List of Threatened Species. Available at: http://www. redlist.org/search/details.php?Species = 19854.