Determination of the structure of oligosaccharides prepared from acharan sulfate

Glycobiology

Volumn 8, Issue 9, 1998, Pages 869-877

  Kim, Yeong Shik ^a   Ahn, Mi Young ^a   Wu, Song Ji ^a   Kim, Dong Hyun ^b   Toida, Toshihiko ^c   Teesch, Lynn M ^d   Park, Youmie ^e   Yu, Guyong ^e   Lin, Jihon ^e   Linhardt, Robert J ^d,e  

^a Seoul National University   (South Korea)

^b Kyung Hee University   (South Korea)

^c CHIBA UNIVERSITY   (Japan)

^d UNIVERSITY OF IOWA   (United States)

^e IA United States   (United States)

Author keywords

Acharan sulfate; Bacteroides stercoris; Electrospray ionization mass spectrometry; Flavobacterium heparinum; Heparin lyase; Oligosaccharide structure

Indexed keywords

ACHARAN SULFATE; DISACCHARIDE; GLYCOSAMINOGLYCAN; HEPARAN; HEPARIN; HEPARIN LYASE; OLIGOSACCHARIDE; UNCLASSIFIED DRUG;

ARTICLE; BACTEROIDES; CAPILLARY ELECTROPHORESIS; CONTROLLED STUDY; FLAVOBACTERIUM; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTON NUCLEAR MAGNETIC RESONANCE; STRUCTURE ACTIVITY RELATION;

ACHATINA FULICA; BACTEROIDES; BACTEROIDES STERCORIS; FLAVOBACTERIUM; FULICA; PEDOBACTER HEPARINUS;

EID: 19244371122     PISSN: 09596658     EISSN: None     Source Type: Journal    
DOI: 10.1093/glycob/8.9.869     Document Type: Article

References (19)

1. Ahn, M.Y., Shin, K.H., Kim, D.-H., Jung, E.-A., Toida, T., Linhardt, R.J. and Kim, Y.S. (1998) Characterization of a Bacteroides species from human intestine that degrades glycosaminoglycans. Can. J. Microbiol., in press.
2. Dietrich, C.P., Silva, M.E. and Michelacci, Y.M. (1973) Sequential degradation of heparin in Flavobacterium heparinum. J. Biol. Chem., 248, 6408-6415.
3. Faham, S., Hileman, R.E., Fromm, J.R., Linhardt, R.J. and Rees, D.C. (1996) Crystallographic analyses of heparin oligosaccharides binding to basic fibroblast growth factor. Science, 271, 1116-1120.
4. Folkman, J. (1995) Angiogenesis in cancer, vascular, rheumatoid and other disease. Nature Med., 1, 27-31.
5. Fromm, J.R., Hileman, R.E., Weiler, J.M. and Linhardt, R.J. (1997) Interaction of fibroblast growth factor-1 and related peptides with heparan sulfate and its oligosaccharides. Arch. Biochem. Biophys., 346, 252-262.
6. Hileman, R.E., Smith, A.E., Toida, T. and Linhardt, R.J. (1997) Preparation and structure of heparin-lyase-derived heparan sulfate oligosaccharides. Glycobiology, 7, 231-239.
7. Hop, C.E.C.A. (1996) Generation of high molecular weight cluster ions by electrospray ionization: implications for mass calibration. J. Mass Spectrom., 31, 1314-1316.
8. Jandik, K.A., Gu, K. and Linhardt, R.J. (1994) Action pattern of polysaccharide lyases on glycosaminoglycans. Glycobiology, 4, 289-296.
9. Kim, D.H., Konishi, L. and Kobayashi, K. (1986) Purification, characterization and reaction mechanism of novel sulfotransferase from an anaerobic bacterium in human intestine. Biochem. Biophys. Acta, 872, 33-41.
10. Kim, Y.S., Jo, Y.T., Chang, I.M., Toida, T.E., Park, Y. and Linhardt, R.J. (1996) A new glycosaminoglycan from the giant African snail Achatina fulica. J. Biol. Chem., 271, 11750-11755.
11. Linhardt, R.J. (1994) Polysaccharide lyases for glycosaminoglycan analysis. In Varki, A. (ed.), Current Protocols in Molecular Biology. Analysis of Glycoconjugates. Vol. 2, John Wiley & Sons, Boston, pp. 17.13.17-17.13.32.
12. 4,5-glycuronate-terminated oligosaccharides from heparin. Eur. J. Biochem., 145, 607-615.
13. Pervin, A., Al-Hakim, A. and Linhardt, R.J. (1994a) Separation of glycosaminoglycan-derived oligosaccharides by capillary electrophoresis using reversed polarity. Anal. Biochem., 221, 182-188.
14. Pervin, A., Gu, K. and Linhardt, R.J. (1994b) Capillary electrophoresis to measure sulfoesterase activity on chondroitin sulfate and heparin derived disaccharides. Appl. Theoret. Electrophor., 3, 297-303.
15. Siegel, M.M., Tabei, K., Kagan, M.Z., Vlahov, I.R., Hileman, R.E. and Linhardt, R.J. (1997) Polysulfated carbohydrates analyzed as ion-paired complexes with basic peptides and proteins using electrospray negative ionization mass spectrometry. J. Mass Spectrum., 32, 760-772.
16. Silvesto, L., Savu, S.R., van Veelen, P.A. and Jacobs, P.L. (1996) Application of mass spectrometry to the analysis of natural and synthetic sulfated oligosaccharides. In Harenberg, J. and Casu, B. (eds.). Nonanticoagulant Actions of Glycosaminoglycans. Plenum Press, New York, pp. 27-46.
17. Toida, T., Hileman, R.E., Smith, A.E., Vlahova, P.I. and Linhardt, R.J. (1996) Enzymatic preparation of heparin oligosaccharides containing antithrombin III binding sites. J. Biol. Chem., 271, 32040-32047.
18. Waheed, A. and Etlen, R.L. (1980) Chemical characterization and substrate specificity of rabbit liver aryl sulfatase A, Biochem. Biophys. Acta, 614, 92-101.
19. Wang, H.M., Toida, T., Kim, Y.S., Capila, I., Hileman, R.E., Bernfield, M. and Linhardt, R.J. (1997) Glycosaminoglycans can influence fibroblast growth factor-2 mitogenicity without significant growth factor binding, Biochem. Biophys. Res. Commun., 235, 369-373.