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Volumn 54, Issue 2, 2005, Pages 218-229

Weighted least-squares likelihood ratio test for branch testing in phylogenies reconstructed from distance measures

Author keywords

Analytical branch test; Bootstrap; Distance; Generalized least squares; Maximum likelihood; Phylogeny; Weighted least squares

Indexed keywords

MITOCHONDRIAL DNA;

EID: 19044390448     PISSN: 10635157     EISSN: None     Source Type: Journal    
DOI: 10.1080/10635150590923308     Document Type: Article
Times cited : (21)

References (61)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike, H. 1974. A new look at the statistical model identification. IEEE Trans. Autom. Contr. 19:716-723.
    • (1974) IEEE Trans. Autom. Contr. , vol.19 , pp. 716-723
    • Akaike, H.1
  • 2
    • 0028331518 scopus 로고
    • Genomic variation of human immunodeficiency virus type 1 (HIV-1): Molecular analyses of HIV-1 in sequential blood samples and various organs obtained at autopsy
    • Ball, J. K., E. C. Holmes, H. Whitwell, and U. Desselberger. 1994. Genomic variation of human immunodeficiency virus type 1 (HIV-1): Molecular analyses of HIV-1 in sequential blood samples and various organs obtained at autopsy. J. Gen. Virol. 75:67-79.
    • (1994) J. Gen. Virol. , vol.75 , pp. 67-79
    • Ball, J.K.1    Holmes, E.C.2    Whitwell, H.3    Desselberger, U.4
  • 3
    • 0029794480 scopus 로고    scopus 로고
    • On the interpretation of bootstrap trees: Appropriate threshold of clade selection and induced gain
    • Berry, V., and O. Gascuel. 1996. On the interpretation of bootstrap trees: Appropriate threshold of clade selection and induced gain. Mol. Biol. Evol. 13:999-1011.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 999-1011
    • Berry, V.1    Gascuel, O.2
  • 4
    • 0026005922 scopus 로고
    • Use of the method of generalized least-squares in reconstructing phylogenies from sequence data
    • Bulmer, M. 1991. Use of the method of generalized least-squares in reconstructing phylogenies from sequence data. Mol. Biol. Evol. 8:868-883.
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 868-883
    • Bulmer, M.1
  • 5
    • 0000156374 scopus 로고
    • Phylogenetic analysis. Models and estimation procedures
    • Cavalli-Sforza, L. L., and A. W. Edwards. 1967. Phylogenetic analysis. Models and estimation procedures. Evolution 21:550-570.
    • (1967) Evolution , vol.21 , pp. 550-570
    • Cavalli-Sforza, L.L.1    Edwards, A.W.2
  • 6
    • 0036148120 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 (HIV-1) quasispecies at the sites of Mycobacterium tuberculosis infection contribute to systemic HIV-1 heterogeneity
    • Collins, K. R., M. E. Quiñones-Mateu, M. Wu, H. Luzze, J. L. Johnson, C. Hirsch, Z. Tossi, and E. J. Arts. 2002. Human immunodeficiency virus type 1 (HIV-1) quasispecies at the sites of Mycobacterium tuberculosis infection contribute to systemic HIV-1 heterogeneity. J. Virol. 76:1697-1706.
    • (2002) J. Virol. , vol.76 , pp. 1697-1706
    • Collins, K.R.1    Quiñones-Mateu, M.E.2    Wu, M.3    Luzze, H.4    Johnson, J.L.5    Hirsch, C.6    Tossi, Z.7    Arts, E.J.8
  • 7
    • 0036943052 scopus 로고    scopus 로고
    • Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle
    • Desper, R., and O. Gascuel. 2002. Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle. J. Comput. Biol. 19:687-705.
    • (2002) J. Comput. Biol. , vol.19 , pp. 687-705
    • Desper, R.1    Gascuel, O.2
  • 8
    • 1542510099 scopus 로고    scopus 로고
    • Theoretical foundation of the balanced minimum evolution method of phylogenetic inference and its relationship to weighted least-squares tree fitting
    • Desper, R., and O. Gascuel. 2004. Theoretical foundation of the balanced minimum evolution method of phylogenetic inference and its relationship to weighted least-squares tree fitting. Mol. Biol. Evol. 21:587-598.
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 587-598
    • Desper, R.1    Gascuel, O.2
  • 9
    • 0028258693 scopus 로고
    • Estimating errors and confidence intervals for branch lengths in phylogenetic trees by a bootstrap approach
    • Dopazo, J. 1994. Estimating errors and confidence intervals for branch lengths in phylogenetic trees by a bootstrap approach. J. Mol. Evol. 38:300-304.
    • (1994) J. Mol. Evol. , vol.38 , pp. 300-304
    • Dopazo, J.1
  • 10
    • 0003242435 scopus 로고
    • The jackknife, the bootstrap, and other resampling plans
    • Efron, B. 1982. The jackknife, the bootstrap, and other resampling plans. Conf. Board. Math. Sci. Soc. Ind. Appl. Math. 38:1-92.
    • (1982) Conf. Board. Math. Sci. Soc. Ind. Appl. Math. , vol.38 , pp. 1-92
    • Efron, B.1
  • 11
    • 0029982849 scopus 로고    scopus 로고
    • Bootstrap confidence levels for phylogenetic trees
    • Efron, B., E. Halloran, and S. Holmes. 1996. Bootstrap confidence levels for phylogenetic trees. Proc. Natl. Acad. Sci. USA. 93:7085-7090.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 7085-7090
    • Efron, B.1    Halloran, E.2    Holmes, S.3
  • 12
    • 0000461280 scopus 로고
    • Distance methods for inferring phylogenies: A justification
    • Felsenstein, J. 1983. Distance methods for inferring phylogenies: A justification. Evolution. 38:783-791.
    • (1983) Evolution , vol.38 , pp. 783-791
    • Felsenstein, J.1
  • 13
    • 0021581577 scopus 로고
    • Distance methods for inferring phylogenies: A justification
    • Felsenstein, J. 1984. Distance methods for inferring phylogenies: A justification. Evolution. 38:16-24.
    • (1984) Evolution , vol.38 , pp. 16-24
    • Felsenstein, J.1
  • 14
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution. 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 15
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genetics, University of Washington, Seattle
    • Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.6c. Distributed by the author. Department of Genetics, University of Washington, Seattle.
    • (1993) PHYLIP (Phylogeny Inference Package) Version 3.6c
    • Felsenstein, J.1
  • 16
    • 0031084471 scopus 로고    scopus 로고
    • An alternating least-squares approach to inferring phylogenies from pairwise distances
    • Felsenstein, J. 1997. An alternating least-squares approach to inferring phylogenies from pairwise distances. Syst. Biol. 46:101-111.
    • (1997) Syst. Biol. , vol.46 , pp. 101-111
    • Felsenstein, J.1
  • 17
    • 12044259827 scopus 로고
    • Is there something wrong with the bootstrap phylogenies? A reply to Hillis and Bull
    • Felsenstein, J., and H. Kishino. 1993. Is there something wrong with the bootstrap phylogenies? A reply to Hillis and Bull. Syst. Biol. 42:193-200.
    • (1993) Syst. Biol. , vol.42 , pp. 193-200
    • Felsenstein, J.1    Kishino, H.2
  • 18
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees
    • Fitch, W. M., and E. Margoliash. 1967. Construction of phylogenetic trees. Science 55:279-284.
    • (1967) Science , vol.55 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 19
    • 0032921657 scopus 로고    scopus 로고
    • Active HIV-1 redistribution and replication in the brain with HIV encephalitis
    • Gatanaga, H., S. Oka, S. Ida, T. Wakabayashi, T. Shioda, and A. Iwamoto. 1999. Active HIV-1 redistribution and replication in the brain with HIV encephalitis. Arch. Virol. 144:29-43.
    • (1999) Arch. Virol. , vol.144 , pp. 29-43
    • Gatanaga, H.1    Oka, S.2    Ida, S.3    Wakabayashi, T.4    Shioda, T.5    Iwamoto, A.6
  • 20
    • 0034351387 scopus 로고    scopus 로고
    • Likelihood-based tests of topologies in phylogenetics
    • Goldman, N.J., P. Anderson, and A. G. Rodrigo. 2000. Likelihood-based tests of topologies in phylogenetics. Syst. Biol. 49:652-670.
    • (2000) Syst. Biol. , vol.49 , pp. 652-670
    • Goldman, N.J.1    Anderson, P.2    Rodrigo, A.G.3
  • 22
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis, D. M., and J. J. Bull. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst. Biol. 42:182-192.
    • (1993) Syst. Biol. , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 23
    • 0029113744 scopus 로고
    • The robustness of two phylogenetic methods: Four-taxon simulation reveal a slight superiority of maximum likelihood over neighbor-joining
    • Huelsenbeck, J. P. 1995. The robustness of two phylogenetic methods: Four-taxon simulation reveal a slight superiority of maximum likelihood over neighbor-joining. Mol. Biol. Evol. 12:843-849.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 843-849
    • Huelsenbeck, J.P.1
  • 24
    • 0027503889 scopus 로고
    • V3 sequences of paired HIV-1 isolates from blood and cerebrospinal fluid cluster according to host and show variation related to the clinical stage of disease
    • Keys, B., J. Karis, B. Fadeel, A. Valentin, G. Norkrans, L. Hagberg, and F. Chiodi. 1993. V3 sequences of paired HIV-1 isolates from blood and cerebrospinal fluid cluster according to host and show variation related to the clinical stage of disease. Virology 196:475-483.
    • (1993) Virology , vol.196 , pp. 475-483
    • Keys, B.1    Karis, J.2    Fadeel, B.3    Valentin, A.4    Norkrans, G.5    Hagberg, L.6    Chiodi, F.7
  • 25
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 26
    • 0024307824 scopus 로고
    • Evaluation of the maximum like-lihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino, H., and M. Hasegawa. 1989. Evaluation of the maximum like-lihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29:170-179.
    • (1989) J. Mol. Evol. , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 27
    • 0028046638 scopus 로고
    • Genetic differences between blood- And brain-derived viral sequences from human immunodeficiency virus type 1-infected patients: Evidence of conserved elements in the V3 region of the envelope protein of brain-derived sequences
    • Korber, B. T. M., K. J. Kunstman, B. K. Patterson, M. Furtado, M. M. McEvilly, R. Levy, and S. M. Wolinsky. 1994. Genetic differences between blood- and brain-derived viral sequences from human immunodeficiency virus type 1-infected patients: Evidence of conserved elements in the V3 region of the envelope protein of brain-derived sequences. J. Virol. 68:7467-7481.
    • (1994) J. Virol. , vol.68 , pp. 7467-7481
    • Korber, B.T.M.1    Kunstman, K.J.2    Patterson, B.K.3    Furtado, M.4    McEvilly, M.M.5    Levy, R.6    Wolinsky, S.M.7
  • 28
    • 0028177080 scopus 로고
    • A simulation comparison of phylogeny algorithms under unequal evolutionary rates
    • Kuhner, M. K., and J. Felsenstein. 1994. A simulation comparison of phylogeny algorithms under unequal evolutionary rates. Mol. Biol. Evol. 11:459-468.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 459-468
    • Kuhner, M.K.1    Felsenstein, J.2
  • 29
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5:150-163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 30
    • 0032976397 scopus 로고    scopus 로고
    • Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees
    • Larget, B., and D. L. Simon. 1999. Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Mol. Biol. Evol. 16:750-759.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 750-759
    • Larget, B.1    Simon, D.L.2
  • 31
    • 0024690185 scopus 로고
    • A statistical test of phylogenies estimated from sequence data
    • Li, W.-H. 1989. A statistical test of phylogenies estimated from sequence data. Mol. Biol. Evol. 6:424-435.
    • (1989) Mol. Biol. Evol. , vol.6 , pp. 424-435
    • Li, W.-H.1
  • 32
    • 11944272095 scopus 로고
    • Statistical tests of DNA phylogenies
    • Li, W.-H., and A. Zharkikh. 1995. Statistical tests of DNA phylogenies. Syst. Biol. 44:49-63.
    • (1995) Syst. Biol. , vol.44 , pp. 49-63
    • Li, W.-H.1    Zharkikh, A.2
  • 34
    • 0032844935 scopus 로고    scopus 로고
    • Mosaic structure of the human immunodeficiency virus type 1 genome infecting lymphoid cells and the brain: Evidence for frequent in vivo recombination events in the evolution of regional populations
    • Morris, A., M. Marsden, K. Halcrow, E. S. Hughes, R. P. Brettle, J. E. Bell, and P. Simmonds. 1999. Mosaic structure of the human immunodeficiency virus type 1 genome infecting lymphoid cells and the brain: Evidence for frequent in vivo recombination events in the evolution of regional populations. J. Virol. 73:8720-8731.
    • (1999) J. Virol. , vol.73 , pp. 8720-8731
    • Morris, A.1    Marsden, M.2    Halcrow, K.3    Hughes, E.S.4    Brettle, R.P.5    Bell, J.E.6    Simmonds, P.7
  • 35
    • 0021927430 scopus 로고
    • Methods for computing the standard errors of branching points in an evolutionary tree and their application to molecular data from humans and apes
    • Nei, M., J. C. Stephens, and N. Saitou. 1985. Methods for computing the standard errors of branching points in an evolutionary tree and their application to molecular data from humans and apes. Mol. Biol. Evol. 2:66-85.
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 66-85
    • Nei, M.1    Stephens, J.C.2    Saitou, N.3
  • 36
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D., and K. A. Crandall. 1998. Modeltest: Testing the model of DNA substitution. Bioinformatics 14:917-918.
    • (1998) Bioinformatics , vol.14 , pp. 917-918
    • Posada, D.1    Crandall, K.A.2
  • 37
    • 0026660413 scopus 로고
    • A simple method for estimating and testing minimum-evolution trees
    • Rzhetsky, A., and M. Nei. 1992a. A simple method for estimating and testing minimum-evolution trees. Mol. Biol. Evol. 9:945-967.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 945-967
    • Rzhetsky, A.1    Nei, M.2
  • 38
    • 0026466041 scopus 로고
    • Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference
    • Rzhetsky, A., and M. Nei. 1992b. Statistical properties of the ordinary least-squares, generalized least-squares, and minimum-evolution methods of phylogenetic inference. J. Mol. Evol. 35:367-375.
    • (1992) J. Mol. Evol. , vol.35 , pp. 367-375
    • Rzhetsky, A.1    Nei, M.2
  • 39
    • 0027185401 scopus 로고
    • Theoretical foundation of the minimum-evolution method of phylogenetic inference
    • Rzhetsky A, and M. Nei. 1993. Theoretical foundation of the minimum-evolution method of phylogenetic inference. Mol Biol Evol. 10:1073-1095.
    • (1993) Mol Biol Evol. , vol.10 , pp. 1073-1095
    • Rzhetsky, A.1    Nei, M.2
  • 40
    • 0000329594 scopus 로고
    • Relative efficiencies of the Fitch-Margoliash, maximum parsimony, maximum likelihood, minimum evolution, and the neighbor-joining methods of phylogenetic tree construction in obtaining the correct tree
    • Saitou, N., and T. Imanishi. 1989. Relative efficiencies of the Fitch-Margoliash, maximum parsimony, maximum likelihood, minimum evolution, and the neighbor-joining methods of phylogenetic tree construction in obtaining the correct tree. Mol. Biol. Evol. 6:514-525.
    • (1989) Mol. Biol. Evol. , vol.6 , pp. 514-525
    • Saitou, N.1    Imanishi, T.2
  • 41
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 42
    • 17544386547 scopus 로고    scopus 로고
    • Natural selection and the organ-specific compartmentalization of HIV-1 V3 hypervariable region
    • Sanjuán R., F. M. Codoñer, A. Moya, and S. F. Elena. 2004. Natural selection and the organ-specific compartmentalization of HIV-1 V3 hypervariable region. Evolution 58:1185-1194.
    • (2004) Evolution , vol.58 , pp. 1185-1194
    • Sanjuán, R.1    Codoñer, F.M.2    Moya, A.3    Elena, S.F.4
  • 43
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira, H. 2002. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 51:492-508.
    • (2002) Syst. Biol. , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 44
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 45
    • 0028985519 scopus 로고
    • Interior-branch and boot-strap tests of phylogenetic trees
    • Sitnikova, T., A. Rzhetsky, and M. Nei. 1995. Interior-branch and boot-strap tests of phylogenetic trees. Mol. Biol. Evol. 12:319-333.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 319-333
    • Sitnikova, T.1    Rzhetsky, A.2    Nei, M.3
  • 49
    • 41049111540 scopus 로고    scopus 로고
    • Inferring confidence sets of possibly misspecified gene trees
    • Strimmer, K., and A. Rambaut. 2002. Inferring confidence sets of possibly misspecified gene trees. Proc. Royal. Soc. London Ser. B 269:137-142.
    • (2002) Proc. Royal. Soc. London Ser. B , vol.269 , pp. 137-142
    • Strimmer, K.1    Rambaut, A.2
  • 50
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: A quartet maximum-likelihood method for reconstructing tree topologies
    • Strimmer, K., and A. van Haeseler. 1996. Quartet puzzling: A quartet maximum-likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13:964-969.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 964-969
    • Strimmer, K.1    Van Haeseler, A.2
  • 51
    • 0038586502 scopus 로고    scopus 로고
    • Confidence regions and hypothesis testing for topologies using generalized least-squares
    • Susko, E. 2003. Confidence regions and hypothesis testing for topologies using generalized least-squares. Mol. Biol. Evol. 20:862-868.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 862-868
    • Susko, E.1
  • 53
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D. M. Hillis, C. Mortiz, and B. K. Mable, eds. Sinauer Associates, Sunderland, Massachusetts
    • Swofford, D. L., G. J. Olsen, P. J. Waddel, and D. M. Hillis. 1996. Phylogenetic inference. Pp. 407-514 in D. M. Hillis, C. Mortiz, and B. K. Mable, eds. Molecular systematics, 2nd edition, Sinauer Associates, Sunderland, Massachusetts.
    • (1996) Molecular Systematics, 2nd Edition , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddel, P.J.3    Hillis, D.M.4
  • 54
    • 0026543389 scopus 로고
    • Statistical method for estimating the standard errors of branch lengths in a phylogenetic tree reconstructed without assuming equal rates of nucleotide substitution among different lineages
    • Tajima, F. 1992. Statistical method for estimating the standard errors of branch lengths in a phylogenetic tree reconstructed without assuming equal rates of nucleotide substitution among different lineages. Mol. Biol. Evol. 9:168-181.
    • (1992) Mol. Biol. Evol. , vol.9 , pp. 168-181
    • Tajima, F.1
  • 55
    • 0021716351 scopus 로고
    • Estimation of evolutionary distance between nucleotide sequences
    • Tajima F., and M. Nei. 1984. Estimation of evolutionary distance between nucleotide sequences. Mol. Biol. Evol. 1:269-285.
    • (1984) Mol. Biol. Evol. , vol.1 , pp. 269-285
    • Tajima, F.1    Nei, M.2
  • 56
    • 0019807817 scopus 로고
    • A model of evolutionary base substitutions and its application with special reference to rapid change of pseudogenes
    • Takahata, N., and M. Kimura. 1981. A model of evolutionary base substitutions and its application with special reference to rapid change of pseudogenes. Genetics 98:641-657.
    • (1981) Genetics , vol.98 , pp. 641-657
    • Takahata, N.1    Kimura, M.2
  • 57
    • 0025851886 scopus 로고
    • Sampling errors in phylogeny
    • Takahata, N., and F. Tajima. 1991. Sampling errors in phylogeny. Mol. Biol. Evol. 8:494-502.
    • (1991) Mol. Biol. Evol. , vol.8 , pp. 494-502
    • Takahata, N.1    Tajima, F.2
  • 58
    • 0020363837 scopus 로고
    • Accuracy of estimated phyloge-netic trees from molecular data. I. Distantly related species
    • Tateno, Y., M. Nei, and F. Tajima. 1982. Accuracy of estimated phyloge-netic trees from molecular data. I. Distantly related species. J. Mol. Evol. 18:387-404.
    • (1982) J. Mol. Evol. , vol.18 , pp. 387-404
    • Tateno, Y.1    Nei, M.2    Tajima, F.3
  • 59
    • 0031984787 scopus 로고    scopus 로고
    • Analysis of the temporal relationship between human immunodeficiency virus type 1 quasispecies in sequential blood samples and various organs obtained at autopsy
    • van't Wout, A.B., I. J. Ran, C. L. Kuiken, N. A. Kootstra, S. T. Pals, and H. Schuitemaker. 1998. Analysis of the temporal relationship between human immunodeficiency virus type 1 quasispecies in sequential blood samples and various organs obtained at autopsy. J. Virol. 72:488-496.
    • (1998) J. Virol. , vol.72 , pp. 488-496
    • Van't Wout, A.B.1    Ran, I.J.2    Kuiken, C.L.3    Kootstra, N.A.4    Pals, S.T.5    Schuitemaker, H.6
  • 60
    • 0035172763 scopus 로고    scopus 로고
    • Identification of shared populations of human immunodeficiency virus type 1 infecting microglia and tissue macrophages outside the central nervous system
    • Wang, T. H., Y. K. Donaldson, R. P. Brettle, J. E. Bell, and P. Simmonds. 2001. Identification of shared populations of human immunodeficiency virus type 1 infecting microglia and tissue macrophages outside the central nervous system. J. Virol. 75:11686-11699.
    • (2001) J. Virol. , vol.75 , pp. 11686-11699
    • Wang, T.H.1    Donaldson, Y.K.2    Brettle, R.P.3    Bell, J.E.4    Simmonds, P.5
  • 61
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: A program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1


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