Evidence for the association of yeast mitochondrial ribosomes with Cox11p, a protein required for the CuB site formation of cytochrome c oxidase

Current Genetics

Volumn 47, Issue 4, 2005, Pages 223-233

  Khalimonchuk, Oleh ^a   Ostermann, Kai ^a   Rödel, Gerhard ^a  

^a DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

Author keywords

Copper metabolism; Cox11p; Cytochrome c oxidase; Mitochondria; Mitoribosomes; Saccharomyces cerevisiae

Indexed keywords

BINDING PROTEIN; COPPER; CYTOCHROME C OXIDASE; CYTOCHROME C OXIDASE 11P; UNCLASSIFIED DRUG;

ARTICLE; BINDING SITE; CARBOXY TERMINAL SEQUENCE; COPPER METABOLISM; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME BINDING; ENZYME LOCALIZATION; ENZYME SUBUNIT; FUNGAL STRAIN; MITOCHONDRIAL MEMBRANE; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN CONTENT; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; SACCHAROMYCES CEREVISIAE;

BASE SEQUENCE; BINDING SITES; COPPER; DNA PRIMERS; ELECTRON TRANSPORT COMPLEX IV; INTRACELLULAR MEMBRANES; MEMBRANE PROTEINS; MITOCHONDRIA; MOLECULAR SEQUENCE DATA; PROTEIN BIOSYNTHESIS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

SACCHAROMYCES CEREVISIAE;

EID: 18944364732     PISSN: 01728083     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00294-005-0569-1     Document Type: Article

References (45)

1. B site formation of cytochrome c oxidase. J Biol Chem 279:34833-34839
2. Barros MH, Carlson CG, Glerum DM, Tzagoloff A (2001) Involvement of mitochondrial ferredoxin and Cox15p in hydroxylation of heme O. FEBS Lett 492:133-138
3. Barros MH, Nobrega FG, Tzagoloff A (2002) Mitochondrial ferredoxin is required for heme A synthesis in Saccharomyces cerevisiae. J Biol Chem 277:9997-10002
4. Beers J, Glerum DM, Tzagoloff A (1997) Purification, characterization, and localization of yeast Cox17p, a mitochondrial copper shuttle. J Biol Chem 272:33191-33196
5. Buchwald P, Krummek G, Rödel G (1991) Immunological identification of yeast SCO1 protein as a component of the inner mitochondrial membrane. Mol Gen Genet 229:413-420
6. Bureik M, Schiffler B, Hiraoka Y, Vogel F, Bernhardt R (2002) Functional expression of human mitochondrial CYP11B2 in fission yeast and identification of a new internal electron transfer protein etp1. Biochemistry 7:2311-2321
7. Carr HS, Winge DR (2003) Assembly of cytochrome c oxidase within the mitochondrion. Acc Chem Res 36:309-316
8. Carr HS, George GN, Winge DR (2002) Yeast Cox11, a protein essential for cytochrome c oxidase assembly, is a Cu(I) binding protein. J Biol Chem 277:31237-31242
9. 2 and cytochrome c peroxidase are located in the intermembrane space of yeast mitochondria. J Biol Chem 257:13028-13033
10. Fujiki Y, Hubbard AL, Fowler S, Lazarow PB (1982) Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmatic reticulum. J Cell Biol 93:97-102 10.1083/ jcb.93.1.97
11. Gan X, Kitakawa M, Yoshino K, Oshiro N, Yonezawa K (2002) Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components. Eur J Biochem 269:5203-5214
12. Gavin AC, Bosche M, Krause R, Grandi P, Marzioch M, Bauer A, Schultz J, Rick JM, Michon AM, Cruciat CM, Remor M, Hofert C, Schelder M, Brajenovic M, Ruffner H, Merino A, Klein K, Hudak M, Dickson D, Rudi T, Gnau V, Bauch A, Bastuck S, Huhse B, Leutwein C, Heurtier MA, Copley RR, Edelmann A, Querfurth E, Rybin V, Drewes G, Raida M, Bouwmeester T, Bork P, Seraphin B, Kuster B, Neubauer G, Superti-Furga G (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415:141-147 10.1038/415141a
13. Glerum DM, Shtanko A, Tzagoloff A (1996) Characterization of COX17, a yeast gene involved in copper metabolism and assembly of cytochrome oxidase. J Biol Chem 271:14504-14509
14. Hiser L, Di Valentin M, Hamer AG, Hosler JP (2000) Cox11p is required for stable formation of the Cu B and magnesium centers of cytochrome c oxidase. J Biol Chem 275:619-623
15. Horng YC, Cobine PA, Maxfield AB, Carr HS, Winge DR (2004) Secific copper transfer from the Cox17 metallochaperone to both Sco1 and Cox11 in the assembly of yeast cytochrome c oxidase. J Biol Chem 279:35334-35340
16. Jia L, Dienhart M, Schramp M, McCauley M, Hell K, Stuart RA (2003) Yeast Oxa1 interacts with mitochondrial ribosomes: The importance of the C-terminal region of Oxa1. EMBO J 22:6438-6447
17. C Kaiser S Michaelis A Mitchell 1994 Methods in yeast genetics Cold Spring Harbor Laboratory Cold Spring Harbor, N.Y.
18. Krause-Buchholz U, Barth K, Dombrowski C, Rödel G (2004) Saccharomyces cerevisiae translational activator Cbs2p is associated with mitochondrial ribosomes. Curr Genet 46:20-28
19. Krummeck G (1992) Das mitochondriale SCO1 protein von Saccharomyces cerevisiae: Untersuchungen zur expression, topologie und funktion. PhD thesis, Ludwig-Maximilians-Universität München, Munich
20. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685 5432063
21. Leary S, Kaufman BA, Pellecchia G, Guercin GH, Mattman A, Jaksch M, Eric A, Shoubridge EA (2004) Human SCO1 and SCO2 have independent, cooperative functions in copper delivery to cytochrome c oxidase. Hum Mol Gen 13:1839-1848
22. Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, Mott R, Ciccarelli F, Copley RR, Ponting CP, Bork P (2002) Recent improvements to the SMART domain-based sequence annotation resource. Nucleic Acids Res 30:242-244 10.1093/nar/30.1.242
23. Lode A, Kuschel M, Paret C, Rödel G (2000) Mitochondrial copper metabolism in yeast: Interaction between Sco1p and Cox2p. FEBS Lett 485:19-24 10.1016/S0014-5793(00)02176-1
24. Lode A, Paret C, Rödel G (2002) Molecular characterization of Saccharomyces cerevisiae Sco2p reveals high degree of redundancy with Sco1p. Yeast 19:909-922
25. Maxfield AB, Heaton DN, Winge DR (2004) Cox17 is functional when tethered to the mitochondrial inner membrane. J Biol Chem 279:5072-5080
26. McMullin TW, Haffter P, Fox TD (1990) A novel small-subunit ribosomal protein of yeast mitochondria that interacts functionally with an mRNA-specific translational activator. Mol Cell Biol 10:4590-4595
27. Mumberg D, Müller R, Funk M (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156:119-122 10.1016/0378-1119(95)00037-7
28. Nittis T, George GN, Winge DR (2001) Yeast Sco1, a protein essential for cytochrome c oxidase function is a Cu(I)-binding protein. J Biol Chem 276:42520-42526
29. Petruzella V, Tiranti V, Fernandez P, Ianna P, Carozzo R, Zeviani M (1998) Identification and characterization of human cDNAs specific to BCS1, PET122, SCO1, COX15 and COX11, five genes involved in the formation and function of the mitochondrial respiratory chain. Genomics 54:494-504
30. Poqulis RJ, Vallejo AN, Pease LR (1996) In vitro recombination and mutagenesis by overlap extension PCR. Methods Mol Biol 57:167-176
31. Poyton RO, McEwen JE (1996) Crosstalk between nuclear and mitochondrial genomes. Annu Rev Biochem 65:563-607
32. Puig S, Thiele DJ (2002) Molecular mechanisms of copper uptake and distribution. Curr Opin Chem Biol 6:171-180
33. Pungartnik C, Kern MF, Brendel M, Henriques JAP (1999) Mutant allele pso7-1, that sensitizes Saccharomyces cerevisiae to photoactivated psoralen is allelic with COX11, encoding a protein indispensable for functional cytochrome c oxidase. Curr Genet 36:124-129
34. Sali A (1999) Functional links between proteins. Nature 402:23-26
35. J Sambrook EF Fritsch T Maniatis 1989 Molecular cloning. A laboratory manual Cold Spring Harbor Laboratory Cold Spring Harbor, N.Y.
36. Sanger F, Nicklen, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463-5467 1:CAS:528:DyaE1cXhtlaru7Y%3D
37. Saveanu C, Fromont-Racine M, Harington A, Richard F, Namane A, Jacquier A (2001) Identification of 12 new yeast mitochondrial ribosomal proteins including 6 that have no prokaryotic homologues. J Biol Chem 276:15861-15867
38. Schiestl RH, Gietz RD (1989) High efficiency transformation of intact yeast cells using single stranded nucleic acid as a carrier. Curr Genet 16:339-346 10.1007/BF00340712
39. Stuart RA (2002) Insertion of proteins into the inner membrane of mitochondria: The role of the Oxa1 complex. Biochim Biophys Acta 1592:79-87
40. Stuart RA, Neupert W (1996) Topogenesis of inner membrane proteins of mitochondria. Trends Biochem Sci 21:261-267
41. Szyrach G, Ott M, Bonnefoy N, Neupert W, Herrmann J (2003) Ribosome binding to the Oxa1 complex facilitates co-translational protein insertion in mitochondria. EMBO J 22:6448-6457
42. Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzava-Itoh K, Hakashima R, Yaono R, Yoshikava S (1995) Structures of metal sites of oxidized bovine heart cytochrome c oxidase at 2.8 Å. Science 269:1069-1074 1:CAS:528:DyaK2MXns12ms7g%3D
43. Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzawa-Itoh K, Nakashima R, Yaono R, Yoshikawa S (1996) The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 Å. Science 272:1136-1144 1:CAS:528:DyaK28XjtF2gu7k%3D
44. Tzagoloff A, Capitano N, Nobrega MP, Gatti D (1990) Cytochrome oxidase assembly in yeast requires the product of COX11, a homolog of the P. denitrificans protein encoded by ORF3. EMBO J 9:2759-2764
45. Williams EH, Perez-Martinez X, Fox TD (2004) MrpL36p, a highly diverged L31 ribosomal protein homolog with additional functional domains in Saccharomyces cerevisiae mitochondria. Genetics 167:65-75