One major QTL mapping and physical map construction for rolled leaf in rice

Acta Genetica Sinica

Volumn 32, Issue 5, 2005, Pages 501-506

  Shao, Yuan Jian ^a,b   Chen, Zong Xiang ^a   Zhang, Ya Fang ^a   Chen, En Hui ^a   Qi, Ding Cheng ^a   Miao, Jin ^a   Pan, Xue Biao ^a  

^a YANGZHOU UNIVERSITY   (China)

^b NANTONG TEXTILE VOCATIONAL TECHNOLOGY COLLEGE   (China)

Author keywords

F2CP; Physical map; QTLs; Rice; Rolled leaf; SSR

Indexed keywords

ARTICLE; CHROMOSOME 5; GENE MAPPING; GENETIC DISTANCE; MARKER ASSISTED BREEDING; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPIC VARIATION; PLANT BREEDING; PLANT CHROMOSOME; PLANT GENETICS; PLANT LEAF; QUANTITATIVE TRAIT LOCUS MAPPING; RICE;

CHROMOSOMES, PLANT; CROSSES, GENETIC; GENES, PLANT; MICROSATELLITE REPEATS; ORYZA SATIVA; PHYSICAL CHROMOSOME MAPPING; PLANT LEAVES; QUANTITATIVE TRAIT LOCI;

EID: 18844423271     PISSN: 03794172     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (25)

1. CHEN Zong-Xiang, PAN Xue-Biao, HU Jun. Relationship between rolled leaf and ideal plant type of rice (Oryza sativa L.). Journal of Jiangsu Agricultural Research, 2001, 22 (4): 88-91.
2. (t) in hybrid rice (Oryza sativa L.). Acta Agronomica Sinic, 2002, 28 (6): 847-851.
3. SHEN Fu-Cheng. Several opinions on how to use rolled leaf character of rice in breeding. Guizhou Agricultural Science, 1983, (5): 6-8.
4. ZHU De-Feng. Comparison of leaf photosynthetic characteristics amomg rice hybrids with different leaf rolling index. Acta Agronomica Sinica, 2001, 27(3): 329-333.
5. YUAN Long-Ping. Super high yielding breeding in hybrid rice. Hybrid Rice, 1997, 12(6): 1-3.
6. LI Shi-Gui, MA Yu-Qing, HE Ping, LI Han-Yun, CHEN Ying, ZHOU Kai-Da, ZHU Li-Huang. Genetic analysis and mapping the flag leaf roll in rice (Oryza sativa L.). Journal of Sichuan Agricultural University, 1998, 16(4): 391-393.
7. GU Xing-You, GU Ming-Hong. Genetic analysis of a rolled leaf character in rice. Hereditas (Beijing), 1995, 17(5): 20-23.
8. CHENG Zhu-Kuang, ZHAO Qing-Hua, YU Heng-Xiu. Study on the vitro propagation of rice seed seedlings and axillary buds. Journal of Jiangsu Agricultural College, 1995, 16 (1): 21-25.
9. WANG Guan-Lin, FANG Hong-Jun. Plant gene engineering. 2nd ed. Beijing: Science Press, 2002: 742-744.
10. McCouch S R, Teytelman L, Xu Y B, Lobos K B, Clare K, Walton M, Fu B, Maghirang R, Li Z K, Xing Y Z, Zhang Q F, Kono I, Yano M, Fjellstrom R, DeClerck G, Schneider D, Cartinhour S, Ware D, Stein L. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA Research, 2002, 9: 199-207.
11. 2 population. Genetics, 1998, 148: 479-494.
12. Wu K S, Tanksley S D. Abundance, polymorphism and genetic mapping of microsatellite in rice. Mol Gen Genet, 1993, 241: 225-235.
13. Ooijen J W, Voorrips R E. Joinmap3.0 mannual. http://www.kyazma.nl.
14. Wang SC, Zeng Z B. Windows QTL Cartographer 2.0. Department of Statistics, North Carolina State University, Raleigh, NC, 2001-2004. http://statgen.ncsu.edu/qtlcart/WQTLCart.htm.
15. Lander E S, Botstein D. Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics, 1989, 121: 185-199.
16. Zeng Z B. Precision mapping of quantitative trait loci. Genetics, 1994, 136: 1457-1468.
17. Chen M S, Presting G, Barbazuk W B, Goicoechea J L, Blackmon B, Fang G, Kim H, Frisch D, Yu Y, Sun S, Higingbottom S, Phimphilai J, Phimphilai D, Thurmond S, Gaudette B, Li P, Liu J, Hatfield J, Main D, Farrar K, Henderson C, Barnett L, Costa R, Williams B, Walser S, Atkins M, Hall C, Budiman M A, Tomkins J P, Luo M, Bancroft I, Salse J, Regad F, Mohapatra T, Singh N K, Tyagi A K, Soderlund C, Dean R A, Wing R A. An integrated physical and genetic map of the rice genome. Plant Cell, 2002, 14: 537-545.
18. Zhao Q, Zhang Y, Cheng Z K, Chen M S, Wang S Y, Feng Q, Huang Y C, Li Y, Tang Y S, Zhou B, Chen Z H, Yu S L, Zhu J J, Hu X, Mu J, Ying K, Hao P, Zhang L, Lu Y, Zhang LS, Liu Y L, Yu Z, Fan D L, Weng Q J, Chen L, Lu T T, Liu X H, Jia P X, Sun T G, Wu Y R, Zhang Y J, Lu Y, Li C, Wang R, Lei H Y, Li T, Hu H, Wu M, Zhang R Q, Guan J P, Zhu J, Fu G, Gu M H, Hong G F, Xue Y B, Wing R, Jiang J M, Han B. A fine physical map of the rice chromosome 4. Genome Res, 2002, 12(5): 817-823.
19. Ohmido N, Akiyama Y, Fukui K. Physical mapping of unique nucleotide sequences on identified rice chromosomes. Plant Molecular Biology, 1998, 38: 1043-1052.
20. Yuan Q, Liang F, Hsiao J, Zismann V, Benito M I, Quackenbush J, Wing R, Buell R. Anchoring of rice BAC clones to the rice genetic map in silico. Nucleic Acids Res, 2000, 28: 3636-3641.
21. Wu J Z, Maehara T, Shimokawa T, Yamamoto S, Harada C, Takazaki Y, Ono N, Mukai Y, Koike K, Yazaki J, Fujii F, Shomura A, Ando T, Kono I, Waki K, Yamamoto K, Yano M, Matsumoto T, Sasaki T. A comprehensive rice transcript map containing 6591 expressed sequence tag sites. Plant Cell, 2002, 14: 525-535.
22. HUANG Zheng, YU Ting, ZHANG Zhi-Hong, YU Si-Bin, HU Zhong-Li, ZHU Ying-Guo. Identification of chromosome regions associated with seeding vigor in rice. Acta Genetica Sinica, 2004, 31(6): 596-603.
23. WANG Bin, LAN Tao, WU Wei-Ren, LI Wei-Ming. Mapping of QTLs controlling chlorophyll content in rice. Acta Genetica Sinica, 2003, 30(12): 1127-1132.
24. LIU Hua-Qing, WU Wei-Ren, DUAN Yuan-Lin, GUAN Hua-Zhong, CHEN Juan, LI Wei-Ming, XUE Yong-Biao. Towards the positional cloning of a spikelet identity gene Frizzle Panicle (FZP) in rice (Oryza sativa L.). Acta Genetica Sinica, 2003, 30(9): 811-816.
25. Stephen E L, Mark J D, Eric S L. MAPMAKER/EXP Version 3.0: Constructing genetic linkage maps with Mapmaker/Exp Version 3.0: A tutorial and reference manual. Whitehead Institute for Biomedical Research Technical Report, January, 1993.