-
1
-
-
0036715529
-
Cotranscriptional editing of Physarum mitochondrial RNA requires local features of the native template
-
Byrne, E.M. and Gott, J.M. (2002) Cotranscriptional editing of Physarum mitochondrial RNA requires local features of the native template. RNA, 8, 1174-1185.
-
(2002)
RNA
, vol.8
, pp. 1174-1185
-
-
Byrne, E.M.1
Gott, J.M.2
-
2
-
-
0037080833
-
In vivo RNA-directed transcription, with template switching, by a mammalian RNA polymerase
-
Chang, J. and Taylor, J. (2002) In vivo RNA-directed transcription, with template switching, by a mammalian RNA polymerase. EMBO J., 21, 157-164.
-
(2002)
EMBO J.
, vol.21
, pp. 157-164
-
-
Chang, J.1
Taylor, J.2
-
3
-
-
0034307473
-
Transcription and RNA editing in a soluble in vitro system from Physarum mitochondria
-
Cheng, Y.-W. and Gott, J.M. (2000) Transcription and RNA editing in a soluble in vitro system from Physarum mitochondria. Nucleic Acids Res., 28, 3695-3701.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3695-3701
-
-
Cheng, Y.-W.1
Gott, J.M.2
-
4
-
-
0035869059
-
Non-templated addition of nucleotides to the 3′ end of nascent RNA during RNA editing in Physarum
-
Cheng, Y.-W., Visomirski-Robic, L.M. and Gott, J.M. (2001) Non-templated addition of nucleotides to the 3′ end of nascent RNA during RNA editing in Physarum. EMBO J., 20, 1405-1414.
-
(2001)
EMBO J.
, vol.20
, pp. 1405-1414
-
-
Cheng, Y.-W.1
Visomirski-Robic, L.M.2
Gott, J.M.3
-
5
-
-
0027761137
-
Multiple RNA polymerase conformations and GreA: Control of the fidelity of transcription
-
Erie, D.A., Hajiseyedjavadi, O., Young, M.C. and von Hippel, P.H. (1993) Multiple RNA polymerase conformations and GreA: Control of the fidelity of transcription. Science, 262, 867-873.
-
(1993)
Science
, vol.262
, pp. 867-873
-
-
Erie, D.A.1
Hajiseyedjavadi, O.2
Young, M.C.3
Von Hippel, P.H.4
-
6
-
-
0034656003
-
Role of RNA structure in non-homologous recombination between genomic molecules of brome mosaic virus
-
Figlerowicz, M. (2000) Role of RNA structure in non-homologous recombination between genomic molecules of brome mosaic virus. Nucleic Acids Res., 28, 1714-1723.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1714-1723
-
-
Figlerowicz, M.1
-
7
-
-
0035369742
-
RNA editing by base dearnination: More enzymes, more targets, new mysteries
-
Gerber, A.P. and Keller, W. (2001) RNA editing by base dearnination: More enzymes, more targets, new mysteries. Trends Biochem. Sci., 26, 376-384.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 376-384
-
-
Gerber, A.P.1
Keller, W.2
-
8
-
-
0002984782
-
RNA editing in Physarum polycephalum
-
Bass, B. (ed.). Oxford University Press, Oxford, UK
-
Gott, J.M. (2001) RNA editing in Physarum polycephalum. In Bass, B. (ed.), RNA Editing: Frontiers in Molecular Biology. Oxford University Press, Oxford, UK, pp. 20-37.
-
(2001)
RNA Editing: Frontiers in Molecular Biology
, pp. 20-37
-
-
Gott, J.M.1
-
9
-
-
0034507456
-
Functions and mechanisms of RNA editing
-
Gott, J.M. and Emeson, R.B. (2000) Functions and mechanisms of RNA editing. Annu. Rev. Genet., 34, 499-531.
-
(2000)
Annu. Rev. Genet.
, vol.34
, pp. 499-531
-
-
Gott, J.M.1
Emeson, R.B.2
-
10
-
-
0027373196
-
Substitutional and insertional RNA editing of the cytochrome c oxidase subunit 1 mRNA of Physarum polycephalum
-
Gott, J.M., Visomirski, L.M. and Hunter, J.L. (1993) Substitutional and insertional RNA editing of the cytochrome c oxidase subunit 1 mRNA of Physarum polycephalum. J. Biol. Chem., 268, 25483-25486.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 25483-25486
-
-
Gott, J.M.1
Visomirski, L.M.2
Hunter, J.L.3
-
11
-
-
0033752609
-
Evolution of four types of RNA editing in myxomycetes
-
Horton T.L., and Landweber, L.F. (2000) Evolution of four types of RNA editing in myxomycetes. RNA, 6, 1339-1346.
-
(2000)
RNA
, vol.6
, pp. 1339-1346
-
-
Horton, T.L.1
Landweber, L.F.2
-
12
-
-
0035512727
-
The many roles of an RNA editor
-
Keegan, L.P., Gallo, A. and O'Connell, M.A. (2001) The many roles of an RNA editor. Nat. Rev. Genet., 2, 869-878.
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 869-878
-
-
Keegan, L.P.1
Gallo, A.2
O'Connell, M.A.3
-
13
-
-
0037154955
-
Editing machines: The complexities of trypanosome RNA editing
-
Madison-Antenucci, S., Grams, J. and Hajduk, S.L. (2002) Editing machines: The complexities of trypanosome RNA editing. Cell, 108, 435-438.
-
(2002)
Cell
, vol.108
, pp. 435-438
-
-
Madison-Antenucci, S.1
Grams, J.2
Hajduk, S.L.3
-
14
-
-
0027652030
-
Insertional editing in mitochondria of Physarum
-
Miller, D., Mahendran, R., Spottswood, M., Costandy, H., Wang, S., Ling, M.-I. and Yang, N. (1993) Insertional editing in mitochondria of Physarum. Semin. Cell Biol., 4, 261-266.
-
(1993)
Semin. Cell Biol.
, vol.4
, pp. 261-266
-
-
Miller, D.1
Mahendran, R.2
Spottswood, M.3
Costandy, H.4
Wang, S.5
Ling, M.-I.6
Yang, N.7
-
15
-
-
0034691523
-
Synthesis of subgenomic RNAs by positive-strand RNA viruses
-
Miller, W.A. and Koev, G. (2000) Synthesis of subgenomic RNAs by positive-strand RNA viruses. Virology, 273, 1-8.
-
(2000)
Virology
, vol.273
, pp. 1-8
-
-
Miller, W.A.1
Koev, G.2
-
16
-
-
0030759896
-
New insights into the mechanisms of RNA recombination
-
Nagy, P.D. and Simon, A.E. (1997) New insights into the mechanisms of RNA recombination. Virology, 235, 1-9.
-
(1997)
Virology
, vol.235
, pp. 1-9
-
-
Nagy, P.D.1
Simon, A.E.2
-
17
-
-
0035674401
-
Mechanisms of retroviral recombination
-
Negroni, M. and Buc, H. (2001) Mechanisms of retroviral recombination. Annu. Rev. Genet., 35, 275-302.
-
(2001)
Annu. Rev. Genet.
, vol.35
, pp. 275-302
-
-
Negroni, M.1
Buc, H.2
-
18
-
-
0037126614
-
Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis
-
Pasternak, A.O., van den Born, E., Spaan, W.J. and Snijder, E.J. (2001) Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis. EMBO J., 20, 7220-7228.
-
(2001)
EMBO J.
, vol.20
, pp. 7220-7228
-
-
Pasternak, A.O.1
Van den Born, E.2
Spaan, W.J.3
Snijder, E.J.4
-
19
-
-
0026068757
-
The P gene of bovine parainfluenza virus 3 expresses all three reading frames from a single mRNA editing site
-
Pelet, T., Curran, J. and Kolakofsky, D. (1991) The P gene of bovine parainfluenza virus 3 expresses all three reading frames from a single mRNA editing site. EMBO J., 10, 443-448.
-
(1991)
EMBO J.
, vol.10
, pp. 443-448
-
-
Pelet, T.1
Curran, J.2
Kolakofsky, D.3
-
20
-
-
0035167124
-
Effects of limiting homology at the site of intermolecular recombinogenic template switching during Moloney murine leukemia virus replication
-
Pfeiffer, J.K. and Telesnitsky, A. (2001) Effects of limiting homology at the site of intermolecular recombinogenic template switching during Moloney murine leukemia virus replication. J. Virol., 75, 11263-11274.
-
(2001)
J. Virol.
, vol.75
, pp. 11263-11274
-
-
Pfeiffer, J.K.1
Telesnitsky, A.2
-
21
-
-
0029076501
-
A model for rearrangements in RNA genomes
-
Pilipenko, E.V., Gmyl, A.P. and Agol, V.I. (1995) A model for rearrangements in RNA genomes. Nucleic Acids Res., 23, 1870-1875.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 1870-1875
-
-
Pilipenko, E.V.1
Gmyl, A.P.2
Agol, V.I.3
-
22
-
-
0032562751
-
Template strand switching by T7 RNA polymerase
-
Rong, M., Durbin, R.K. and McAllister, W.T. (1998) Template strand switching by T7 RNA polymerase. J. Biol. Chem., 273, 10253-10260.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 10253-10260
-
-
Rong, M.1
Durbin, R.K.2
McAllister, W.T.3
-
23
-
-
0028989615
-
RNA editing of the col mRNA throughout the life cycle of Physarum polycephalum
-
Rundquist, B.A. and Gott, J.M. (1995) RNA editing of the col mRNA throughout the life cycle of Physarum polycephalum. Mol. Gen. Genet., 247, 306-311.
-
(1995)
Mol. Gen. Genet.
, vol.247
, pp. 306-311
-
-
Rundquist, B.A.1
Gott, J.M.2
-
24
-
-
0029976177
-
The virion glycoproteins of Ebola viruses are encoded in two reading frames and are expressed through transcriptional editing
-
Sanchez, A., Trappier, S.G., Mahy, B.W.J., Peters, C.J. and Nichol, S.T. (1996) The virion glycoproteins of Ebola viruses are encoded in two reading frames and are expressed through transcriptional editing. Proc. Natl Acad. Sci. USA, 93, 3602-3607.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 3602-3607
-
-
Sanchez, A.1
Trappier, S.G.2
Mahy, B.W.J.3
Peters, C.J.4
Nichol, S.T.5
-
25
-
-
0037014475
-
A-to-I editing: New and old sites, functions and speculations
-
Seeburg, P.H. (2002) A-to-I editing: New and old sites, functions and speculations. Neuron, 35, 17-20.
-
(2002)
Neuron
, vol.35
, pp. 17-20
-
-
Seeburg, P.H.1
-
26
-
-
0036364353
-
RNA editing: Complexity and complications
-
Stuart, K. and Panigrahi, A.K. (2002) RNA editing: Complexity and complications. Mol. Microbiol., 45, 591-596.
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 591-596
-
-
Stuart, K.1
Panigrahi, A.K.2
-
27
-
-
0035140091
-
The complete DNA sequence of the mitochondrial genome of Physarum polycephalum
-
Takano, H., Abe, T., Sakurai, R., Moriyama, Y., Miyazawa, Y., Nozaki, H., Kawano, S., Sasaki, N. and Kuroiwa, T. (2001) The complete DNA sequence of the mitochondrial genome of Physarum polycephalum. Mol. Gen. Genet., 264, 539-545.
-
(2001)
Mol. Gen. Genet.
, vol.264
, pp. 539-545
-
-
Takano, H.1
Abe, T.2
Sakurai, R.3
Moriyama, Y.4
Miyazawa, Y.5
Nozaki, H.6
Kawano, S.7
Sasaki, N.8
Kuroiwa, T.9
-
28
-
-
0024282829
-
Two mRNAs that differ by two nontemplated nucleotides encode the amino coterminal proteins P and V of the paramyxovirus SV5
-
Thomas, S.M., Lamb, R.A. and Paterson, R.G. (1988) Two mRNAs that differ by two nontemplated nucleotides encode the amino coterminal proteins P and V of the paramyxovirus SV5. Cell, 54, 891-902.
-
(1988)
Cell
, vol.54
, pp. 891-902
-
-
Thomas, S.M.1
Lamb, R.A.2
Paterson, R.G.3
-
29
-
-
0025359331
-
A stuttering model for paramyxovirus P mRNA editing
-
Vidal, S., Curran, J. and Kolakosky, D. (1990a) A stuttering model for paramyxovirus P mRNA editing. EMBO J., 9, 2017-2022.
-
(1990)
EMBO J.
, vol.9
, pp. 2017-2022
-
-
Vidal, S.1
Curran, J.2
Kolakosky, D.3
-
30
-
-
0025141746
-
Editing of the Sendai virus P/C mRNA by G insertion occurs during mRNA synthesis via a virus-encoded activity
-
Vidal, S., Curran, J. and Kolakofsky, D. (1990b) Editing of the Sendai virus P/C mRNA by G insertion occurs during mRNA synthesis via a virus-encoded activity. J. Virol., 64, 239-246.
-
(1990)
J. Virol.
, vol.64
, pp. 239-246
-
-
Vidal, S.1
Curran, J.2
Kolakofsky, D.3
-
31
-
-
0029375404
-
Accurate and efficient insertional RNA editing in isolated Physarum mitochondria
-
Visomirski-Robic, L.M. and Gott, J.M. (1995) Accurate and efficient insertional RNA editing in isolated Physarum mitochondria. RNA, 1, 681-691.
-
(1995)
RNA
, vol.1
, pp. 681-691
-
-
Visomirski-Robic, L.M.1
Gott, J.M.2
-
32
-
-
0030838694
-
Insertional editing in isolated Physarum mitochondria is linked to RNA synthesis
-
Visomirski-Robic, L.M. and Gott, J.M. (1997) Insertional editing in isolated Physarum mitochondria is linked to RNA synthesis. RNA, 3, 821-837.
-
(1997)
RNA
, vol.3
, pp. 821-837
-
-
Visomirski-Robic, L.M.1
Gott, J.M.2
-
33
-
-
0029589329
-
GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases
-
Volchkov, V.E., Becker, S., Volchkova, V.A., Ternovoj, V.A., Kotov, A.N., Netesov, S.V., and Klenk, H.D. (1995) GP mRNA of Ebola virus is edited by the Ebola virus polymerase and by T7 and vaccinia virus polymerases. Virology, 214, 421-430.
-
(1995)
Virology
, vol.214
, pp. 421-430
-
-
Volchkov, V.E.1
Becker, S.2
Volchkova, V.A.3
Ternovoj, V.A.4
Kotov, A.N.5
Netesov, S.V.6
Klenk, H.D.7
-
34
-
-
0033614039
-
Editing of cytochrome b mRNA in Physarum mitochondria
-
Wang, S.S., Mahendran, R. and Miller, D.L. (1999) Editing of cytochrome b mRNA in Physarum mitochondria. J. Biol. Chem., 274, 2725-2731.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 2725-2731
-
-
Wang, S.S.1
Mahendran, R.2
Miller, D.L.3
-
35
-
-
0028604392
-
Transcription bypass or blockage at single-strand breaks on the DNA template strand: Effect of different 3′ and 5′ flanking groups on the T7 RNA polymerase elongation complex
-
Zhou, W. and Doetsch, P.W. (1994) Transcription bypass or blockage at single-strand breaks on the DNA template strand: Effect of different 3′ and 5′ flanking groups on the T7 RNA polymerase elongation complex. Biochemistry, 33, 14926-14934.
-
(1994)
Biochemistry
, vol.33
, pp. 14926-14934
-
-
Zhou, W.1
Doetsch, P.W.2
-
36
-
-
0029160260
-
T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation
-
Zhou, W., Reines, D. and Doetsch, P.W. (1995) T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation. Cell, 82, 577-585.
-
(1995)
Cell
, vol.82
, pp. 577-585
-
-
Zhou, W.1
Reines, D.2
Doetsch, P.W.3
|