Molecular systematics of the genus Cottus (Scorpaeniformes: Cottidae)

Copeia

Volumn , Issue 2, 2005, Pages 303-311

  Kinziger, Andrew P ^a,b   Wood, Robert M ^a   Neely, David A ^a  

^a SAINT LOUIS UNIVERSITY   (United States)

^b HUMBOLDT STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MOLECULAR ANALYSIS; TAXONOMY;

COTTIDAE; COTTUS; COTTUS GOBIO; LEPTOCOTTUS; SCORPAENIFORMES;

EID: 18644384071     PISSN: 00458511     EISSN: None     Source Type: Journal    
DOI: 10.1643/CI-03-290R1     Document Type: Article

References (48)

1. ANDOH, T., AND A. GOTO. 1988. Biochemical evidence for reproductive isolation between the sympatric populations of Cottus amblystomopsis and C. nozawae in Hokkaido, Japan. Jpn. J. Ichthyol. 35:184-191.
2. ANDREASSON, S. 1972. Distribution of Cottus poecilopus Heckel and C. gobio L. (Pisces) in Scandinavia. Zool. Scripta 1:69-78.
3. BAILEY, R. M., AND C. E. BOND. 1963. Four new species of freshwater sculpins, genus Cottus, from western North America. Occ. Pap. Mus. Zool., Univ. Mich. 634:1-27.
4. BAILEY, R. M., AND M. F. DIMICK. 1949. Cottus hubbsi, a new cottid fish from the Columbia River system in Washington and Idaho. Ibid. 513:1-18.
5. BERG, L. S. 1965. Freshwater Fishes of the U.S.S.R. and Adjacent Countries. Vol. 3. Israel Program for Scientific Translations, Jerusalem.
6. BOGUTSKAYA, N. G., A. M. NASEKA, AND A. M. KOMLEV. 2001. Freshwater fishes of Russia: preliminary results of the fauna revision. Proc. Zool. Inst. Russ. Acad. Sci. 289:39-50.
7. BOND, C. E. 1963. Distribution and ecology of freshwater sculpins, Genus Cottus, in Oregon. Unpubl. Ph.D. diss., Univ. of Michigan, Ann Arbor, Michigan.
8. BREMER, K. 1994. Branch support and tree stability. Cladistics 10:295-304.
9. ESCHMEYER, W. N. 1998. Catalog of Fishes. California Academy of Sciences, San Francisco, California.
10. FELSENSTEIN, J. 1985. Confidence limits on phylogenics: an approach using the bootstrap. Evolution 39:783-791.
11. GOTO, A. 1983. Spawning habits and reproductive isolating mechanisms of two closely related river-sculpins, Cottus amblystomopsis and C. nozawae. Jpn. J. Ichthyol. 30:168-175.
12. _. 1990. Alternative life-history styles of Japanese freshwater sculpins revisited. Environ. Biol. Fish. 28: 101-112.
13. HOUSTON, J. 1990. Status of the Spoonhead Sculpin, Cottus ricei, in Canada. Can. Field Nat. 104:14-19.
14. HUELSENBECK, J. P., AND F. RONQUIST. 2001. MR-BAYES: Bayesian inference of phylogeny. Bioinformatics 17:754-755.
15. JENKINS, R. E., AND N. M. BURKHEAD. 1994. Freshwater fishes of Virginia. American Fisheries Society, Bethesda, Maryland.
16. JORDAN, D. S., B. W. EVERMANN, AND H. W. CLARK. 1930. Check list of the fishes and fishlike vertebrates of North and Middle America north of the northern boundary of Venezuela and Colombia. Rep. U. S. Comm. Fish. for 1928 (pt. 2):1-670.
17. KINZIGER, A. P., AND R. M. WOOD. 2003. Molecular systematics of the polytypic species Cottus hypselurus (Teleostei: Cottidae). Copeia 2003:624-627.
18. KOLI, L. 1969. Geographical variation of Cottus gobio L. (Pisces, Cottidae) in northern Europe. Ann. Zool. Fennici 6:353-390.
19. KONTULA, T., S. V. KIRILCHIK, AND R. VAINOLA. 2003. Endemic diversification of the monophyletic cottoid fish species flock in Lake Baikal explored with mtDNA sequencing. Mol. Phylogenet. Evol. 27:143-155.
20. KRESJA, R. J. 1965. The systematics of the prickly scnlpin, Cottus asper: an investigation of genetic and non-genetic variation within a polytypic species. Unpubl. Ph.D. diss., Univ. British Columbia, Vancouver, Canada.
21. LEACHÉ, A. D., AND T. W. REEDER. 2002. Molecular systematics of the Eastern Fence Lizard (Sceloporus undulatus): a comparison of parsimony, likelihood, and Bayesian approaches. Syst. Biol. 51:44-68.
22. LEE, D. S., C. R. GILBERT, C. H. HOCUTT, R. E. JENKINS, D. E. MCALLISTER, AND J. R. STAUFFER, JR. 1980. Atias of North American Freshwater Fishes. North Carolina Mus. Nat. Hist., Raleigh, North Carolina.
23. LEVITON, A. E., AND R. H. GIBBS, JR. 1988. Standards in herpetology and ichthyology. Standard symbolic codes for institution resource collections in herpetology and ichthyology. Supplement No. 1: additions and corrections. Copeia 1988:280-282.
24. _, E. HEAL, AND C. E. DAWSON. 1985. Standards in herpetology and ichthyology: part 1. Standard symbolic codes for institutional resource collections in herpetology and ichthyology. Ibid. 1985:802-832.
25. MASUDA, H., K. AMAOKA, C. ARAGA, T. UYENO, AND T. YOSHINO. 1984. The Fishes of the Japanese Archipelago. Tokai University Press, Tokyo.
26. MCALLISTER, D. E., AND C. C. LINDSEY. 1959. Systematics of the freshwater sculpins of British Columbia. Bull. Natl. Mus. Canada 172:66-89.
27. MECKLENBURG, C. W., T. A. MECKLENBURG, L. K. THORSTEINSON, AND C. J. ARTHUR. 2002. Fishes of Alaska. Amer. Fish. Soc., Bethesda, Maryland.
28. MILLER, R. R., J. D. WILLIAMS, AND J. E. WILLIAMS. 1989. Extinctions of North American fishes during the past century. Fisheries 14:22-38.
29. MIYA, M., H. TAKESHIMA, H. ENDO, N. B. ISHIGURO, J. G. INOUE, T. MUKAI, T. P. SATOH, M. YAMAGUCHI, A. KAWAGUCHI, K. MABUCHI, S. M. SHIRAI, AND M. NISHIDA. 2003. Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences. Mol. Phylogenet. Evol. 26:121-138.
30. MOYLE, P. B. 2002. Inland Fishes of California. Univ. of California Press, Berkeley, California.
31. rd Ed. John Wiley and Sons, New York.
32. NISHIDA, M., M. KAWABATA, N. KANIE, V. G. SIDELEVA, AND A. M. GRACHEV. 1999. Phylogeny of Baikalian sculpins: sequence analysis of the mitochondrial 16S rRNA gene, p. 95-101. In: Biodiversity, Phylogeny and Environment in Lake Baikal. N. Mryazaki (ed.). Univ. of Tokyo Press, Tokyo.
33. NYBELIN, O. 1958. Några resultat av naturhistoriska museets undersökningar över svenska sötvattensimpor. Göteborgs Musei Årstryck 1958:32-56.
34. POSADA, D., AND K. A. CRANDALL. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
35. RESHETNIKOV, YU. S., N. G. BOGUTSKAYA, E. D. VASIL'EVA, E. A. DOROFEEVA, A. M. NASEKA, O. A. POPOVA, K. A. SAVVAITOVA, V. G. SIDELEVA, AND L. I. SOKOLOV. 1997. An annotated check-list of the freshwater fishes of Russia. J. Ichthyol. 37:687-736.
36. ROBINS, C. R. 1954. A taxonomic revision of the Cottus bairdi and Cottus carolinae species groups in eastern North America (Pisces, Cottidae). Unpubl. Ph.D. diss., Cornell Univ., Ithaca, New York.
37. _, AND R. R. MILLER. 1957. Classification, variation, and distribution of the sculpins, genus Cottus, inhabiting pacific slope waters in California and southern Oregon, with a key to the species. Cal. Fish Game 43:213-233.
38. SCHMIDT, T. R., AND J. R. GOLD. 1993. Complete sequence of the mitochondrial cytochrome b gene in the Cherryfin Shiner, Lythrurus roeipinnis (Telostei: Cyprinidae). Copeia 1993:880-883.
39. SIDELEVA, V. G. 1982. Seismosensornaya sistema i ekologiya baikalskikh podkamenshchikovykh ryb Cottoidei. Nauka, Novosibirsk.
40. _. 2003. The Endemic Fishes of Lake Baikal. Backhuys Publishers, Leiden, The Netherlands.
41. SMITH, W. L., AND W. C. WHEELER. 2004. Polyphyly of the mail-cheeked fishes (Teleostei: Scorpaeniformes) evidence from mitochondrial and nuclear sequence data. Mol. Phylogenet. Evol. 32:627-646.
42. STRAUSS, R. E. 1980. Genetic and morphometric variation and the systematic relationships of eastern North American sculpins (Pisces: Cottidae). Unpubl. Ph.D. diss., The Pennsylvania State Univ., University Park, Pennsylvania.
43. TALIEV, D. N. 1955. Bychki-podkamenshchiki Baikala (Cottoidei). Izdatelstvo Akademii Nauk SSSR. Moscow, Leningrad.
44. WALTERS, V. 1955. Fishes of western Arctic America and eastern Arctic Siberia. Bull. Amer. Mus. Nat. Hist. 106:255-368.
45. WATANABE, M. 1960. Fauna Japonica Cottidae (Pisces). Biogeogr. Soc. Japan, Tokyo.
46. WEINS, J. J. 1998. Combining data sets with different phylogenetic histories. Syst. Biol. 47:568-581.
47. YABE, M. 1985. Comparative osteology and myology of the superfamily Cottoidea (Pisces: Scorpaeniformes), and its phylogenetic classification. Mem. Fac. Fish. Hokkaido Univ. 32:1-130.
48. ZANDER, R. H. 2004. Minimal values for reliability of bootstrap and jackknife proportions, decay index, and Bayesian posterior probability. Phyloinformatics 2:1-13.