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Volumn 3, Issue 1, 2004, Pages

Saturation and quantization reduction in microarray experiments using two scans at different sensitivities

Author keywords

Microarray; Preprocessing; Quantization; Saturation

Indexed keywords

ANALYTIC METHOD; ANALYTICAL ERROR; ARTICLE; COMPUTER PROGRAM; DEVICE; DNA MICROARRAY; DYNAMICS; EXPERIMENT; GENE EXPRESSION; GENETIC ANALYSIS; IMAGE ANALYSIS; IMAGE PROCESSING; LASER; MATHEMATICAL ANALYSIS; MATHEMATICAL MODEL; MEASUREMENT; QUANTITATIVE ANALYSIS; SENSITIVITY ANALYSIS;

EID: 18544374126     PISSN: 15446115     EISSN: 15446115     Source Type: Journal    
DOI: 10.2202/1544-6115.1057     Document Type: Article
Times cited : (15)

References (23)
  • 1
    • 1542287901 scopus 로고    scopus 로고
    • Clarification of "Gamma" and the Accurate Characterization of CRT Monitors
    • Deguchi,T., Katoh, N. and Berns, R.S. (1999) Clarification of "Gamma" and the Accurate Characterization of CRT Monitors. Proc. SID International Symposium, 30, 786-789.
    • (1999) Proc. SID International Symposium , vol.30 , pp. 786-789
    • Deguchi, T.1    Katoh, N.2    Berns, R.S.3
  • 2
    • 0037188477 scopus 로고    scopus 로고
    • Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range
    • Dudley,A.M., Aach,J., Steffen,M.A. and Church,G.M. (2002) Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range. PNAS, 99, 7554-7559
    • (2002) PNAS , vol.99 , pp. 7554-7559
    • Dudley, A.M.1    Aach, J.2    Steffen, M.A.3    Church, G.M.4
  • 5
    • 14644400935 scopus 로고    scopus 로고
    • Normalization and systematic measurement error in cDNA microarray data
    • Unpublished manuscript
    • Finkelstein,D.B., Gollub,J. and Cherry,J.M. (2002) Normalization and systematic measurement error in cDNA microarray data. Joint Statistical Meeting 2000. Unpublished manuscript.
    • (2002) Joint Statistical Meeting 2000
    • Finkelstein, D.B.1    Gollub, J.2    Cherry, J.M.3
  • 8
    • 14644390102 scopus 로고    scopus 로고
    • Photomultiplier Tubes, Photomultiplier Tubes and Related Devices
    • June 2002 http://usa.hamamatsu.com/hcpdf/catsandguides/ PMTCAT_accessories.pdf
    • Hamamatsu Photonics (2002) Photomultiplier Tubes, Photomultiplier Tubes and Related Devices. Catalog June 2002 (www.hamamatsu.com) (http://usa. hamamatsu.com/hcpdf/catsandguides/PMTCAT_accessories.pdf)
    • (2002) Catalog
  • 9
    • 0034921979 scopus 로고    scopus 로고
    • Testing for Differentially-Expressed Genes by Maximum-Likelihood Analysis of Microarray Data
    • Ideker,T., Thorsson,V., Siegel,A.F. and Hood,L.E. (2000) Testing for Differentially-Expressed Genes by Maximum-Likelihood Analysis of Microarray Data. Journal of Computational Biology, 7, 805-817.
    • (2000) Journal of Computational Biology , vol.7 , pp. 805-817
    • Ideker, T.1    Thorsson, V.2    Siegel, A.F.3    Hood, L.E.4
  • 10
    • 2442704146 scopus 로고    scopus 로고
    • Profound influence of microarray scanner characteristics on gene expression ratios: Analysis and procedure for correction
    • Provisional
    • Lyng,H., Badiee,A., Svendsrud,D.H., Hovig,E., Myklebost,O. and Stokke,T. (2004) Profound influence of microarray scanner characteristics on gene expression ratios: analysis and procedure for correction. BMC Genomics 5:10. (Provisional)
    • (2004) BMC Genomics , vol.5 , pp. 10
    • Lyng, H.1    Badiee, A.2    Svendsrud, D.H.3    Hovig, E.4    Myklebost, O.5    Stokke, T.6
  • 11
    • 0027849378 scopus 로고
    • "Gamma" and its disguises: The Nonlinear Mappings of Intensity in Perception, CRTs, Film and Video
    • Poynton, C. A. (1993) "Gamma" and its disguises: The Nonlinear Mappings of Intensity in Perception, CRTs, Film and Video. The Society of Motion Picture and Television Engineers Journal, 102, 1099-1108.
    • (1993) The Society of Motion Picture and Television Engineers Journal , vol.102 , pp. 1099-1108
    • Poynton, C.A.1
  • 12
    • 84883838178 scopus 로고    scopus 로고
    • Improved detection of differentially expressed genes in microarray experiments through multiple scanning and image integration
    • 2003, e149
    • Romualdi,C., Trevisan,S., Celegato,B., Costal,G. and Lanfranchi,G. (2003) Improved detection of differentially expressed genes in microarray experiments through multiple scanning and image integration. Nucleic Acids Research, 2003, 31:23 e149.
    • (2003) Nucleic Acids Research , vol.31 , pp. 23
    • Romualdi, C.1    Trevisan, S.2    Celegato, B.3    Costal, G.4    Lanfranchi, G.5
  • 14
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena. M., Shalon, D., Davis, R.W. and Brown, P.O. (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science , 270, 467-70.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 17
    • 0029057619 scopus 로고
    • Photobleaching kinetics of fluorescein in quantitative fluorescence microscopy
    • Song,L., Hennink,E.J., Young,I.T. and Tanke,H.J. (1995) Photobleaching kinetics of fluorescein in quantitative fluorescence microscopy. Biophys. J., 68, 2588-2600.
    • (1995) Biophys. J. , vol.68 , pp. 2588-2600
    • Song, L.1    Hennink, E.J.2    Young, I.T.A.3    Tanke, H.J.4
  • 21
    • 0001329086 scopus 로고
    • Statistical Analysis of Amplitude-Quantized Sampled-Data Systems
    • Widrow,B. (1961) Statistical Analysis of Amplitude-Quantized Sampled-Data Systems. Trans. American Institute of Electrical Eng., 79, 555-568.
    • (1961) Trans. American Institute of Electrical Eng. , vol.79 , pp. 555-568
    • Widrow, B.1
  • 23
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang,Y.H., Dudoit,S., Luu,P., Lin,D.M., Peng,V., Ngai,J. and Speed,T. (2002) Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, E15.
    • (2002) Nucleic Acids Res. , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6    Speed, T.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.