Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics

Journal of Molecular Biology

Volumn 338, Issue 2, 2004, Pages 207-215

  Sandelin, Albin ^a   Wasserman, Wyeth W ^a,b  

^a KAROLINSKA INSTITUTE   (Sweden)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

ARE, antioxidant response element; Biological constraints; Familial binding profiles; FBP, familial binding profile; Pattern comparison; Pattern finding; TF, transcription factor; TFBS, transcription factor binding site; Transcriptional regulation

Indexed keywords

HEPATOCYTE NUCLEAR FACTOR 3; MYOCYTE ENHANCER FACTOR 2; MYOGENIC FACTOR; NUCLEAR FACTOR I; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR DORSAL; TRANSCRIPTION FACTOR SRF; UNCLASSIFIED DRUG;

ALGORITHM; ARTICLE; BINDING SITE; BIOINFORMATICS; CONTROLLED STUDY; GENE CONTROL; GENE EXPRESSION PROFILING; GENE SEQUENCE; GENE STRUCTURE; GENETIC VARIABILITY; GENOME; MOUSE; MULTIGENE FAMILY; NONHUMAN; PRIORITY JOURNAL; PROTEIN MOTIF; SIGNAL NOISE RATIO; TRANSCRIPTION REGULATION;

EID: 1842505125     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2004.02.048     Document Type: Article

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