Puumala hantavirus genome in patients with nephropathia epidemica: Correlation of PCR positivity with HLA haplotype and link to viral sequences in local rodents

Journal of Clinical Microbiology

Volumn 35, Issue 5, 1997, Pages 1090-1096

  Plyusnin, Alexander ^a   Hörling, Jan ^b   Kanerva, Mari ^a   Mustonen, Jukka ^c   Cheng, Ying ^a   Partanen, Jukka ^d   Vapalahti, Olli ^a   Kukkonen, Sami K J ^a   Niemimaa, Jukka ^e   Henttonen, Heikki ^e   Niklasson, Bo ^b   Lundkvist, Åke ^b   Vaheri, Antti ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b SWEDISH INSTITUTE FOR INFECTIOUS DISEASE CONTROL   (Sweden)

^c TAMPERE UNIVERSITY OF TECHNOLOGY   (Finland)

^d FINNISH RED CROSS BLOOD SERVICE   (Finland)

^e FINNISH FOREST RESEARCH INSTITUTE   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; ARTICLE; CLINICAL ARTICLE; FEMALE; GENE SEQUENCE; HUMAN; MALE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PUUMALA VIRUS; VIRUS DETECTION; VIRUS GENE;

CLETHRIONOMYS GLAREOLUS; MURIDAE; NEPHROPATHIA; NEPHROPATHIA EPIDEMICA; PUUMALA VIRUS; RODENTIA;

EID: 1842408333     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.35.5.1090-1096.1997     Document Type: Article

References (47)

1. Ad hoc Committee on Acceptable Field Methods in Mammalogy. 1987. Acceptable field methods in mammalogy: preliminary guidelines approved by the American Society of Mammalogists. Journal of Mammalogy, vol. 68 (supplement). Brigham Young University Department of Zoology, Provo, Utah.
2. Alper, C. A., Z. Awdeh, and E. J. Yunis. 1992. Conserved, extended MHC haplotypes. Exp. Clin. Immunogenet. 9:58-71.
3. Antic, D., Y. C. Kang, K. Spik, C. S. Schmaljohn, O. Vapalahti, and A. Vaheri. 1992. Comparison of the deduced gene products of the L, M and S genome segments of hantaviruses. Virus Res. 24:35-46.
4. Bowen, M. D., H. Kariwa, P. E. Rollin, C. J. Peters, and S. T. Nichol. 1995. Genetic characterization of a human isolate of Puumala hantavirus from France. Virus Res. 38:279-289.
5. Brummer-Korvenkontio, M., H. Henttonen, and A. Vaheri. 1982. Hemorrhagic fever with renal syndrome in Finland: ecology and virology of nephropathia epidemica. Scand. J. Infect. Dis. Suppl. 36:88-91.
6. Brummer-Korvenkontio, M., A. Vaheri, T. Hovi, C.-H. von Bonsdorff, J. Vuorimies, T. Manni, K. Penttinen, N. Oker-Blom, and J. Lähdevirta. 1980. Nephropathia epidemica: detection of antigen in bank voles and serological diagnosis of human infection. J. Infect. Dis. 141:131-134.
7. Campbell, R. D., and J. Trowsdale. 1993. Map of the human major histocompatibility complex. Immunol. Today 14:349-352.
8. Centers for Disease Control and Prevention. 1993. Hantavirus infection in the southwestern United States: interim recommendations for risk reduction. Morbid. Mortal. Weekly Rep. 42(RR-11):1-13.
9. Chomczynski, P., and N. Sacchi. 1987. Single-step of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
10. Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c.
11. Giebel, L. B., R. Stohwasser, L. Zöller, E. K. F. Bautz, and G. Darai. 1989. Determination of the coding capacity of the M segment of nephropathia epidemica virus strain Hällnäs B1 by molecular cloning and nucleotide sequence analysis. Virology 172:498-505.
12. Hansson, L., and H. Henttonen. 1985. Regional differences in cyclicity and reproduction in Clethrionomys spp.: are they related? Ann. Zool. Fenn. 22:277-288.
13. Hansson, L., and H. Henttonen. 1985. Gradients in cyclicity of small rodents: importance of latitude and snow cover. Oecologia (Berlin) 67:394-402.
14. Hansson, L., and H. Henttonen. 1988. Rodent dynamics as community process. Trends Ecol. Evol. 3:195-200.
15. Hedman, K., A. Vaheri, and M. Brummer-Korvenkontio. 1991. Rapid diagnosis of hantavirus disease with an IgG-avidity assay. Lancet 338:1353-1356.
16. Henderson, W. W., M. C. Monroe, S. C. St. Jeor, W. P. Thayers, J. E. Rowe, C. J. Peters, and S. T. Nichol. 1995. Naturally occurring Sin Nombre virus genetic reassortants. Virology 214:602-610.
17. Henttonen, H., A. D. McGuire, and L. Hansson. 1985. Comparisons of amplitudes and frequencies (spectral analyses) of density variations in long-term data sets of Clethrionomys species. Ann. Zool. Fenn. 22:221-228.
18. Henttonen, H., O. Vapalahti, and A. Vaheri. 1996. How many kinds of hantaviruses? Trends Ecol. Evol. 11:7-8.
19. Hjelle, B., S.-W. Lee, W. Song, N. Torrez-Martinez, J.-W. Song, R. Yanagihara, I. Gavrilovskaya, and E. R. Mackow. 1995. Molecular linkage of hantavirus pulmonary syndrome to the white-footed mouse, Peromyscus leucopus: genetic characterization of the M genome of New York virus. J. Virol. 69:8137-8141.
20. Hörling, J., Y. Cheng, A. Plyusnin, K. Persson, H. Lehväslaiho, A. Vaheri, B. Niklasson, and Å. Lundkvist. 1995. Nucleotide and deduced amino acid sequences of the M and S genome segments of a Swedish Puumala virus isolate. Virus Res. 39:321-330.
21. Hörling, J., Å. Lundkvist, M. Jaarola, A. Plyusnin, H. Tegelström, K. Persson, H. Lehväslaiho, B. Hörnfeldt, A. Vaheri, and B. Niklasson. 1996. Distribution and genetic heterogeneity of Puumala hantavirus in Sweden. J. Gen. Virol. 77:2555-2562.
22. Hörling, J., Å. Lundkvist, K. Persson, M. Mullaart, T. Dzagurova, A. Dekonenko, E. Tkachenko, and B. Niklasson. 1995. Detection and subsequent sequencing of Puumala virus from human specimens by PCR. J. Clin. Microbiol. 33:277-282.
23. Lähdevirta, J. 1971. Nephropathia epidemica in Finland. Ann. Clin. Res. 3(Suppl. 8):1-154.
24. Li, D., A. L. Schmaljohn, K. Anderson, and C. S. Schmaljohn. 1995. Complete nucleotide sequences of the M and S segments of two hantavirus isolates from California: evidence for reassortment in nature among viruses related to hantavirus pulmonary syndrome. Virology 206:973-983.
25. Lundkvist, Å., Y. Cheng, K. Brus Sjölander, A. Vaheri, and A. Plyusnin. Cell culture-adaptation of Puumala hantavirus changes the infectivity for its natural reservoir, Clethrionomys glareolus, and leads to accumulation of mutants with alterated genomic RNA S segment. Submitted for publication.
26. Mustonen, J., M. Brummer-Korvenkontio, K. Hedman, A. Pasternack, K. Pietilä, and A. Vaheri. 1994. Nephropathia epidemica in Finland: a retrospective study of 126 cases. Scand. J. Infect. Dis. 26:7-13.
27. Mustonen, J., J. Partanen, M. Kanerva, K. Pietilä, O. Vapalahti, A. Pasternack, and A. Vaheri. 1996. Genetic susceptibility to severe course of nephropathia epidemica caused by Puumala hantavirus. Kidney Int. 49:217-221.
28. Nichol, S. T., C. F. Spiropoulou, S. Morzunov, P. E. Rollin, T. G. Ksiazek, H. Feldmann, A. Sanchez, J. Childs, S. Zaki, and C. J. Peters. 1993. Genetic identification of a hantavirus associated with an outbreak of acute respiratory illness. Science 262:914-917.
29. Niklasson, B., B. Hörnfeldt, Å. Lundkvist, S. Björsten, and J. LeDuc. 1995. Temporal dynamics of Puumala virus antibody prevalence in voles and of nephropathia epidemica incidence in humans. Am. J. Trop. Med. Hyg. 53: 134-140.
30. Niklasson, B., and J. LeDuc. 1987. Epidemiology of nephropathia epidemica in Sweden. J. Infect. Dis. 155:269-276.
31. Piiparinen, H., O. Vapalahti, A. Plyusnin, A. Vaheri, and H. Lankinen. Unpublished data.
32. Pilaski, J., H. Feldmann, S. Morzunov, P. E. Rollin, S. L. Ruo, B. Lauer, C. J. Peters, and S. T. Nichol. 1994. Genetic identification of a new Puumala virus strain causing severe hemorrhagic fever with renal syndrome in Germany. J. Infect. Dis. 170:1456-1462.
33. Plyusnin, A., Y. Cheng, O. Vapalahti, M. Pejcoch, J. Unar, Z. Jelinkova, H. Lehväslaiho, Å. Lundkvist, and A. Vaheri. 1995. Genetic variation in Tula hantaviruses: sequence analysis of the S and M segments of strains from Central Europe. Virus Res. 39:237-250.
34. Plyusnin, A., O. Vapalahti, H. Lehväslaiho, N. Apekina, T. Mikhailova, I. Gavrilovskaya, J. Laakkonen, J. Niemimaa, H. Henttonen, M. Brummer-Korvenkontio, and A. Vaheri. 1995. Genetic variation of wild Puumala viruses within the serotype, local rodent population and individual animal. Virus Res. 38:25-41.
35. Plyusnin, A., O. Vapalahti, K. Ulfves, H. Lehväslaiho, N. Apekina, I. Gavrilovskaya, V. Blinov, and A. Vaheri. 1994. Sequences of wild Puumala virus genes show a correlation of genetic variation with geographic origin of the strains. J. Gen. Virol. 75:405-409.
36. Rowe, J. E., S. C. St. Jeor, J. Riolo, E. W. Otteson, M. C. Monroe, W. W. Henderson, T. G. Ksiazek, P. E. Rollin, and S. T. Nichol. 1995. Coexistence of several novel hantaviruses in rodents indigenous to North America. Virology 213:122-130.
37. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
38. Schmaljohn, A. L., D. Li, D. L. Negley, D. S. Bressler, M. J. Turell, G. W. Korch, M. S. Ascher, and C. S. Schmaljohn. 1995. Isolation and initial characterization of a newfound hantavirus from California. Virology 206: 963-972.
39. Stohwasser, R., L. B. Giebel, L. Zöller, E. K. F. Bautz, and G. Darai. 1990. Molecular characterization of the RNA S segment of nephropathia epidemica virus strain Hällnäs B1. Virology 174:79-86.
40. Stohwasser, R., K. Raab, G. Darai, and E. F. K. Bautz. 1991. Primary structure of the Large (L) RNA segment of nephropathia epidemica virus strain Hällnäs B1 coding for the viral RNA polymerase. Virology 183:386-391.
41. Valtonen, M., M. Lauppila, P. Kotilainen, J. Lähdevirta, C.-M. Svartbäck, O. Kosunen, J. Nurminen, H. Sarkkinen, and M. Brummer-Korvenkontio. 1995. Four fatal cases of nephropathia epidemica. Scand. J. Infect. Dis. 27:515-517.
42. Vapalahti, O., H. Kallio-Kokko, M. Brummer-Korvenkontio, E.-M. Salonen, and A. Vaheri. 1992. Cloning and sequencing of Puumala virus Sotkamo strain S and M segments: evidence for strain variation in hantaviruses and expression of the nucleocapsid protein. J. Gen. Virol. 73:829-838.
43. Vapalahti, O., H. Kallio-Kokko, A. Närvänen, I. Julkunen, Å. Lundkvist, A. Plyusnin, H. Lehväslaiho, M. Brummer-Korvenkontio, A. Vaheri, and H. Lankinen. 1995. Human B-cell epitopes of Puumala virus nucleocapsid protein, the major antigen in early serological response. J. Med. Virol. 46:293-303.
44. Vapalahti, O., A. Plyusnin, A. Vaheri, and H. Henttonen. 1995. Hantavirus antibodies in European mammalogists. Lancet 345:1569.
45. Westman, P., T. Kuismin, J. Partanen, and S. Koskimies. 1993. An HLA-DR typing protocol using group-specific PCR-amplification followed by restriction enzyme digests. Eur. J. Immunogenet. 20:103-109.
46. Xiao, S.-Y., Y. K. Chu, F. K. Knauert, R. S. Lofts, J. M. Dalrymple, and J. W. LeDuc. 1992. Comparison of hantavirus isolates using a genus reactive primer pair polymerase chain reaction. J. Gen. Virol. 73:567-573.
47. Xiao, S.-Y., K. W. Spik, D. Li, and C. S. Schmaljohn. 1993. Nucleotide and deduced amino acid sequences of the M and S genome segments of two Puumala virus isolates from Russia. Virus Res. 30:97-103.