DNA flexibility of the UP element is a major determinant for transcriptional activation at the Escherichia coli acetate promoter

Nucleic Acids Research

Volumn 25, Issue 4, 1997, Pages 713-718

  Nègre, Didier ^a   Bonod Bidaud, Christelle ^a   Oudot, Christelle ^a   Prost, Jean François ^a   Kolb, Annie ^b   Ishihama, Akira ^c   Cozzone, Alain J ^a   Cortay, Jean Claude ^a  

^a CNRS   (France)

^b INSTITUT PASTEUR   (France)

^c NATIONAL INSTITUTE OF GENETICS   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID; BACTERIAL DNA; RNA POLYMERASE;

ARTICLE; BACTERIAL GENE; CONTROLLED STUDY; ENZYME SUBUNIT; ESCHERICHIA COLI; NONHUMAN; OPERON; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA BINDING; TRANSCRIPTION REGULATION;

ACETATES; BASE SEQUENCE; BINDING SITES; DNA, BACTERIAL; DNA-DIRECTED RNA POLYMERASES; ESCHERICHIA COLI; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); RRNA OPERON; TRANS-ACTIVATION (GENETICS); TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 1842335066     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/25.4.713     Document Type: Article

References (36)

1. Ross, W., Gosink, K.K., Salomon, J., Igarashi, K., Zou, C., Ishihama, A., Severinov, K. and Gourse, R.L. (1993) Science 262, 1407-1413.
2. Rao, L., Ross, W., Appleman, J.A., Gaal, T., Leirmo, S., Schlax, P.J., Record, M.T. and Gourse, R.L. (1994) J. Mol. Biol. 235, 1421-1435.
3. Murakami, K., Fujita, N. and Ishihama, A. (1996) EMBO. J. 15, 4358-4367.
4. Jeon, Y.H., Negishi, T., Shirakawa, M., Yamazaki, T., Fujita, N., Ishihama, A. and Kyogoku, Y. (1995) Science 270, 1495-1497.
5. Gaal, T., Ross, W., Blatter, E.E., Tang, H., Jia, X., Krishnan, V.V., Assa-Munt, N., Ebright, R.H. and Gourse, R.L. (1996) Genes Dev. 10, 16-26.
6. Brunelle, A. and Schleif, R.F. (1987) Proc. Natl. Acad. Sci. USA 84, 6673-6676.
7. Yanish-Perron, C., Viera, J. and Messing, J. (1985) Gene 33, 103-119.
8. Miller, J.H. (1972) Experimental in Molecular Genetics Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
9. Bradford, M.M. (1976) Anal. Biochem. 72, 248-254.
10. Blatter, E.E., Ross, W., Tang, H., Course, R.L. and Ebright, R.H. (1994) Cell 78, 889-896.
11. Negishi, T., Fujita, N. and Ishihama, A. (1995) J. Mol. Biol. 248, 723-728.
12. Byrne, C., Stokes, H.W. and Ward, K.A. (1988) Nucleic Acids Res. 19, 9342-9342.
13. Brosius, J., Dull, T.J., Sleeter, D.D. and Noller, H.F. (1981) J. Mol. Biol. 148, 107-124.
14. Maxam, A.M. and Gilbert, W. (1980) Methods Enzymol. 65, 499-560.
15. Garner, M.M. and Revzin, A. (1981) Nucleic Acids Res. 9, 3047-3060.
16. Brownlee, G.G., Sanger, F., and Barrell, B. G. (1967) Nature 215, 735-736.
17. Igarashi, K. and Ishihama, A. (1991) Cell 32, 319-325.
18. Tang, H., Severinov, K., Goldfarb, A. and Ebright, R.H. (1995) Proc. Natl. Acad. Sci. USA 92, 4902-4906.
19. Busby, S. and Ebright, R.H. (1994) Cell 79, 743-746.
20. Harrison, S.C. and Aggarwal, A.K. (1990) Annu. Rev. Biochem. 59, 933-969.
21. Cortay, J.C., Nègre, D., Galinier, A., Duclos, B., Perrière, G. and Cozzone, A.J. (1999) EMBO J. 10, 675-679.
22. Nègre, D., Cortay, J.C., Galinier, A., Sauve, P. and Cozzone, A.J. (1992) J. Mol. Biol. 228, 23-29.
23. Jorgensen, E.D., Durbin, R.K., Risman, S.S. and McAllister, W.T. (1991) J. Biol. Chem. 266, 645-651.
24. Werel, W., Schickor, P. and Heumann, H. (1991) EMBO J. 10, 2589-2594.
25. Landini, P. and Volkert, M.R. (1995) EMBO J. 14, 4329-4335.
26. Resnik, E., Pan, B., Ramani, N., Freundlich, M. and LaPorte, D.C. (1996) J. Bacteriol. 178, 2715-2717.
27. Pagel, J.M., Winkelman, J.W., Adams, C.W. and Hatfield, G.W. (1992) J. Mol. Biol. 224, 919-935.
28. Parekh, B.S. and Hatfield, G.W. (1996) Proc. Natl. Acad. Sci. USA 93, 1173-1177.
29. McAllister, C.F. and Achberger, B.C. (1988) J. Biol. Chem. 263, 11743-11749.
30. Bracco, L.T., Kotlarz, A., Kolb, A., Diekmann, S. and Buc, H. (1989) EMBO J. 8, 4289-4296.
31. Gartenberg, M.R. and Crothers, D.M. (1991) J. Mol. Biol. 219, 217-230.
32. Ellinger, T., Behnke, D., Knaus, R., Bujard, H. and Gralla, J.D. (1994) J. Mol. Biol. 239, 466-475.
33. Travers, A.A. (1990) Cell 60, 177-180.
34. Nickerson, C.A. and Achberger, E.C. (1995) J. Bacteriol. 177, 5756-5761.
35. Jordi, B.J.A.M., Owen-Hughes, T.A., Hulton, C.S.J. and Higgins, C.F. (1995) EMBO J. 14, 5690-5700.
36. Flatow, U., Rajendrakumar, G.V. and Garges, S. (1996) J. Bacteriol. 178, 2436-2439.