Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information

Mycological Research

Volumn 109, Issue 4, 2005, Pages 401-409

  Pei, Ming H ^a   Bayon, Carlos ^a   Ruiz, Carmen ^a  

^a ROTHAMSTED RESEARCH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

PHYLOGENETICS;

MELAMPSORA; MELAMPSORA AMYGDALINAE; MELAMPSORA CAPRAEARUM; MELAMPSORA COLEOSPORIOIDES; MELAMPSORA EPIPHYLLA; MELAMPSORA RIBESII; POPULUS; SALICACEAE; SALIX; SALIX VIMINALIS; UREDINALES;

EID: 18244388237     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756205002479     Document Type: Article

References (36)

1. Arnheim, N., Krystal, M., Schmickel, R., Wilson, G., Ryder, O. & Zimmer, E. (1980) Molecular evidence for genetic exchanges among ribosomal genes on non-homologous chromosomes in man and apes. Proceedings of the National Academy of Sciences, USA 77: 7323-7327.
2. Bagyanarayana, G. (1998) The species of Melampsora on Populus (Salicaceae). In Proceedings of the First IUFRO Rusts of Forest Trees Working Party Conference, 2-7 Aug. 1998, Saariselkä (R. Jalkanen, P. E. Crane, J. A. Walla & T. Aalto, eds): 37-51. Finnish Forest Research Institute, Rovaniemi.
3. Cummins, G. B. (1959) Illustrated Genera of Rust Fungi. Burgess, M.N.
4. Dover, G. (1982) Molecular drive: a cohesive mode of species evolution. Nature 299: 111-117.
5. Durrieu, G. (1980) Phylogeny of Uredinales on Pinaceae. Reports of Tottori Mycological Institute 18: 283-290.
6. Farris, J. S., Kallersjo, M., Kluge, A. G. & Bult, C. (1994) Testing significance of incongruence. Cladistics 10: 315-319.
7. Farris, J. S., Kallersjo, M., Kluge, A. G. & Bult, C. (1995) Constructing a significance test for incongruence. Systematic Biology 44: 570-572.
8. Gäumann, E. (1959) Die Rostpilze Mitteleuropas. Beiträge zur Kryptogamen-flora der Schweiz 12: 1-1407.
9. Georgiev, O. I., Nillaev, V., Hadjiolov, A. A., Skryabin, K. G., Zakharyev, V. M. & Bayev, A. A. (1981) The structure of the yeast ribosomal RNA genes. 4. Complete sequence of the 25S RNA gene from Saccharomyces cerevisiae. Nucleic Acid Research 9: 6953-6958.
10. Gueho, E., Kurtzman, C. P. & Peterson, S. W. (1989) Evolutionary affinities of heterobasidiomycetous yeasts estimated from 18S and 25S ribosomal RNA sequence divergence. Systematic and Applied Microbiology 13: 230-236.
11. Hantula, J., Kasanen, R., Kaitera, J. & Moricca, S. (2002) Analyses of genetic variation suggest that pine rusts Cronartium flaccidum and Peridermium pini belong to the same species. Mycological Research 106: 203-209.
12. Hawksworth, D. L., Kirk, P. M., Sutton, B. C. & Pegler, D. N. (1995) Ainsworth's & Bisby's Dictionary of the Fungi. 8th edn. CAB International, Wallingford.
13. Hiratsuka, N. (1932) Inoculation experiments with some heteroecious species of the Melampsoraceae in Japan. Japanese Journal of Botany 6: 1-33.
14. Hiratsuka, N. & Kaneko, S. (1982) A taxonomic revision of Melampsora on willows in Japan. Reports of Tottori Mycological Institute 20: 1-32.
15. Hiratsuka, Y. & Sato, S. (1982) Morphology and taxonomy of rust. In: The Rust Fungi (K. J. Scott & A. K. Charkravorty, eds): 1-36. Academic Press, London.
16. Hylander, N., Jørstad, I. & Nannfeldt, J. A. (1953) Enumeratio Uredinearum Scandinavicarum. Opera Botanica 1: 1-102.
17. Kumar, S., Tamura, K., Jakobsen, I. B. & Nei, M. (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17: 1244-1245.
18. Maier, W., Begerow, D., Weiß, M. & Oberwinkler, F. (2003) Phylogeny of the rust fungi: an approach using large subunit ribosomal DNA sequences. Canadian Journal of Botany 81: 12-23.
19. Leppik, E. (1953) Some viewpoints on the phylogeny of rust fungi. I. Coniferous rusts. Mycologia 45: 46-74.
20. Newcombe, G. & Chastagner, G. A. (1993) First report of the Eurasian poplar leaf rust fungus, Melampsora larici-populina, in North America. Plant Disease 77: 532-535.
21. Nei, M. & Kumar, S. (2000) Molecular Evolution and Phylogenetics. Oxford University Press, New York.
22. Pei, M. H., Bayon, C., Ruiz, C., Yuan, Z. W. & Hunter, T. (2002) Genetic variation in Melampsora larici-epitea on biomass willows assessed using AFLP. European Journal of Plant Pathology 108: 229-236.
23. Pei, M. H., Hunter, T. & Ruiz, C. (1999a) Occurrence of Melampsora rusts in biomass willow plantations for renewable energy in the United Kingdom. Biomass and Bioenergy 17: 153-163.
24. Pei, M. H., Royle, D. J. & Hunter, T. (1993) Identity and host alternation of some willow rusts (Melampsora spp.) in England. Mycological Research 97: 845-851.
25. Pei, M. H., Royle, D. J. & Hunter, T. (1995) A comparative study of stem-infecting and leaf-infecting forms of Melampsora rust on Salix viminalis in the UK. Mycological Research 99: 357-363.
26. Pei, M. H, Royle, D. J. & Hunter, T. (1996) Pathogenic specialization of Melampsora epitea var. epitea on Salix. Plant Pathology 45: 679-690.
27. Pei, M. H., Royle, D. J. & Hunter, T. (1999b) Hybridisation in larch-alternating Melampsora epitea (M. larici-epitea). Mycological Research 103: 1440-1446.
28. Pei, M. H. & Ruiz, C. (2000) AFLP evidence of distinct patterns of life-cycle in two forms of Melampsora rust on Salix viminalis. Mycological Research 104: 937-942.
29. Swofford, D. L. (2002) PAUP*: phylogenetic analysis using parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, MA.
30. Sydow, P. & Sydow, H. (1915) Monographia Uredinearum. Vol. 3. Borntraeger, Leipzig.
31. Tian, C. M., Shang, Y. Z., Zhuang, J. W., Wang, Q. & Kakishima, M. (2004) Morphological and molecular phylogenetic analysis of Melampsora species on poplars in China. Mycoscience 45: 56-66.
32. van Kraayenoord, C. W. S., Laundon, G. F. & Spiers, A. G. (1974) Poplar rusts invade New Zealand. Plant Disease Reporter 58: 423-427.
33. Vogler, D. R. & Bruns, T. D. (1998) Phylogenetic relationships among the pine stem rust fungi (Cronartium and Peridermium spp.). Mycologia 90: 244-257.
34. White, T. J., Lee, S., Bruns, T. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: a guide to (methods and applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White, eds): 315-322. Academic Press, San Diego.
35. Wilson, M. & Henderson, D. M. (1966) The British Rust Fungi. Cambridge University Press, Cambridge, UK.
36. Zambino, P. J. & Szabo, L. J. (1993) Phylogenetic relationships of selected cereal and grass rusts based on rDNA analysis. Mycologia 85: 401-414.