Confidence mapping in diffusion tensor magnetic resonance imaging tractography using a bootstrap approach

Magnetic Resonance in Medicine

Volumn 53, Issue 5, 2005, Pages 1143-1149

  Jones, Derek K ^a,b   Pierpaoli, Carlo ^a  

^a EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^b KING'S COLLEGE LONDON   (United Kingdom)

Author keywords

Bootstrap; Deterministic; DT MRI; Probabilistic; Tractography

Indexed keywords

MAGNETIC RESONANCE IMAGING; STATISTICAL METHODS; TENSORS;

BOOTSTRAP; DETERMINISTIC; DIFFUSION TENSOR MAGNETIC RESONANCE IMAGING; DIFFUSION TENSOR MRI; PROBABILISTIC; PROBABILISTIC TRACTOGRAPHY; SOURCES OF VARIABILITY; TRACTOGRAPHY;

DIFFUSION TENSOR IMAGING;

ALGORITHM; ARTICLE; BOOTSTRAP ANALYSIS; DIFFUSION TENSOR IMAGING; IMAGING SYSTEM; MATHEMATICAL MODEL; NUCLEAR MAGNETIC RESONANCE IMAGING; PROBABILITY; STATISTICAL ANALYSIS; TECHNIQUE; TRACTOGRAPHY;

EID: 18244362334     PISSN: 07403194     EISSN: None     Source Type: Journal    
DOI: 10.1002/mrm.20466     Document Type: Article

References (30)

1. Mori S, Crain BJ, Chacko VP, van Zijl PC. Three dimensional tracking of axonal projections in the brain by magnetic resonance imaging. Ann Neurol 1999;45:265-269.
2. Conturo TE, Lori NF, Cull TS, Akbudak E, Snyder AZ, Shimony JS, McKinstry RC, Burton M, Raichle ME. Tracking neuronal fiber pathways in the living human brain. Proc Natl Acad Sci USA 1999;96: 10422-10427.
3. Poupon C, Clark CA, Frouin V, Regis J, Bloch I, Le Bihan D, Mangin J. Regularization of diffusion-based direction maps for the tracking of brain white matter fasciculi. NeuroImage 2000;12:184-195.
4. Basser PJ, Pajevic S, Pierpaoli C, Duda J, Aldroubi A. In vivo tractography using DT-MRI data. Magn Reson Med 2000;44:625-632.
5. Tuch DS, Belliveau JW, Wedeen VJ. A path integral approach to white matter tractography. In: Proceedings of the 8th Annual Meeting of ISMRM, Denver, 2000. p. 791.
6. Parker GJM. Tracing fiber tracts using fast marching. In: Proceedings of the 8th Annual Meeting of ISMRM, Denver, 2000. p. 85.
7. Koch M, Glauche V, Finsterbusch J, Nolte U, Frahm J, Buchel C. Estimation of anatomical connectivity from diffusion tensor data. NeuroImage 13:S176, 2001.
8. Parker GJM, Barker GJ, Buckley DL. A probabilistic index of connectivity (PICo) determined using a Monte Carlo approach to streamlines. ISMRM Workshop Diffusion MRI: Biophysical Issues. St Malo, France, March 2002.
9. Behrens TEJ, Johansen-Berg H, Woolrich MW, Smith SM, Wheeler-Kingshott CAM, Boulby PA, Barker GJ, Sillery EL, Sheehan K. Ciccarelli O, Thompson AJ, Brady JM, Matthews PM. Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging. Nat Neurosci 2003;6:750-757.
10. Basser PJ, Mattiello J, Le Bihan D. MR diffusion tensor spectroscopy and imaging. Biophys J 1994;66:259-267.
11. Catani M, Howard R, Pajevic S, Jones DK. Virtual in vivo interactive dissection of white matter fasciculi in the human brain. NeuroImage 2002;17:77-94.
12. Mori S, Kaufmann WE, Davatzikos C, Stieltjes B, Amodei L, Fredericksen K, Pearlson GD, Melhem ER, Solaiyappan M, Raymond GV, Moser HW, van Zijl PCM. Imaging cortical association using diffusion-tensor-based tracts in the human brain axonal tracking. Magn Reson Med 2002;47:215-223.
13. Mori S, Fredericksen K, van Zijl PCM, Stieltjes B, Kraut MA, Solaiyappan M, Pomper MG. Brain white matter anatomy of tumor patients evaluated with diffusion tensor imaging. Ann Neurol 2002;51:377-380.
14. Jones DK, Catani M, Reeves SJ, Shergill SS, McGuire P, Horsfield MA, Simmons A, Williams SCR, Howard RJ. A tractography approach to studying fronto-temporal fasciculi in schizophrenia and late onset schizophrenia-like psychosis. In: Proceedings of the 11th Annual Meeting of ISMRM, Toronto, Canada, 2003. p. 244.
15. Clark CA, Barrick TR, Murphy MM, Bell BA. White matter fiber tracking in patients with space-occupying lesions of the brain: a new technique for neurosurgical planning? NeuroImage 2003;20:1601-1608.
16. Basser PJ. Quantifying errors in fiber tract direction and diffusion tensor field maps resulting from MR noise. In: Proceedings of the 5th Annual Meeting of ISMRM, Vancouver, Canada, 1997. p. 1740.
17. Jones DK. Determining and visualizing uncertainty in estimates of fiber orientation from diffusion tensor MRI. Magn Reson Med 2003;49:7-12.
18. Efron B. Bootstrap methods: another look at the jackknife. Ann Statist 1979;7:1-16.
19. Pajevic S, Basser PJ. Parametric and non-parametric statistical analysis of DT-MRI data. J Magn Reson 2003;161:1-14.
20. Lazar M, Hasan KM, Alexander AL. Bootstrap analysis of DT-MRI tractography techniques: streamlines and tensorlines. In: Proceedings of the 9th Annual Meeting of ISMRM, Glasgow, Scotland, 2001. p. 1527.
21. Jones DK, Horsfield MA, Simmons A. Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging. Magn Reson Med 1999;42:515-525.
22. Pierpaoli C, Marenco S, Rohde G, Jones DK, Barnett AS. Analyzing the contribution of cardiac pulsation to the variability of quantities derived from the diffusion tensor. In: Proceedings of the 11th Annual Meeting of ISMRM, Toronto, Canada, 2003. p. 70.
23. Jones DK. The effect of gradient sampling schemes on measures derived from diffusion tensor MRI: A Monte Carlo study. Magn Reson Med 2004;51:807-815.
24. Rohde GK, Barnett AS, Basser PJ, Marenco S, Pierpaoli C. Comprehensive approach for correction of motion and distortion in diffusion weighted MRI. Magn Reson Med 2004;51:103-114.
25. Pajevic S, Aldroubi A, Basser PJ. A continuous tensor field approximation of discrete DT-MRI data for extracting microstructural and architectural features of tissue. J Magn Reson 2002;154:85-100.
26. Jones DK, Pierpaoli C. Towards a marriage of deterministic and probabilistic tractography mehtods: bootstrap analysis of fiber trajectories in the human brain. In: Proceedings of the 12th Annual Meeting of ISMRM, Kyoto, Japan, 2004. p. 1276.
27. Westin CF, Peled S, Gudbjartsson H, Kikinis R, Jolesz FA. Geometrical diffusion measures for MRI from tensor basis analysis. In: Proceedings of the 5th Annual Meeting of ISMRM, Vancouver, Canada, 1997. p. 1742.
28. Pierpaoli C, Barnett A, Pajevic S, Chen R, Penix LR, Virta A, Basser P. Water diffusion changes in Wallerian degeneration and their dependence on white matter architecture. NeuroImage 2001;13:1174-1185.
29. Henkelman RM. Measurement of signal intensities in the presence of noise in MR images. Med Phys 1985;12:232-233 (erratum in Med Phys 1986;13:544).
30. Henkelman RM. Measurement of signal intensities in the presence of noise in MR images. Med Phys 1985;12:232-233 (erratum in Med Phys 1986;13:544).