Construction of non-symmetric substitution matrices derived from proteomes with biased amino acid distributions

Comptes Rendus - Biologies

Volumn 328, Issue 5, 2005, Pages 445-453

  Bastien, Olivier ^a,b   Roy, Sylvaine ^c   Maréchal, Éric ^a  

^a Laboratoire de Physiologie Cellulaire Vegetale Grenoble   (France)

^b Gene IT   (France)

^c Laboratoire de Biologie Informatique et Mathématiques   (France)

Author keywords

Biased genome; BLOSUM; Information theory; Mutual information; Plasmodium falciparum; Substitution matrix

Indexed keywords

ADENOSINE; AMINO ACID; PROTEOME; THYMIDINE;

AMINO ACID; GENOME;

AMINO ACID SUBSTITUTION; ARABIDOPSIS; ARTICLE; CLUSTER ANALYSIS; COMPUTER PROGRAM; GENETIC ANALYSIS; GENETIC DATABASE; GENOME; MALARIA; MATHEMATICAL MODEL; METHODOLOGY; MICROBIAL GENETICS; NONHUMAN; PLASMODIUM FALCIPARUM; PROTEIN ANALYSIS; PROTEIN FAMILY; PROTEIN LOCALIZATION; SEQUENCE ALIGNMENT; SPECIES COMPARISON;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMALS; GENOME, PROTOZOAN; MODELS, GENETIC; PLASMODIUM FALCIPARUM; PROTEOME;

PLASMODIUM FALCIPARUM;

EID: 18144420835     PISSN: 16310691     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.crvi.2005.02.002     Document Type: Article

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