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Volumn 6, Issue , 2005, Pages

Using purine skews to predict genes in AT-rich poxviruses

Author keywords

[No Author keywords available]

Indexed keywords

PURINE DERIVATIVE; PYRIMIDINE DERIVATIVE;

EID: 18044389358     PISSN: 14712164     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-6-22     Document Type: Article
Times cited : (16)

References (18)
  • 1
    • 0013997435 scopus 로고
    • Pyrimidine clusters on the transcribing strand of DNA and their possible role in the initiation of RNA synthesis
    • Szybalski W, Kubinski H, Sheldrick P: Pyrimidine clusters on the transcribing strand of DNA and their possible role in the initiation of RNA synthesis. Cold Spring Harb Symp Quant Biol 1966, 31:123-127.
    • (1966) Cold Spring Harb. Symp. Quant. Biol. , vol.31 , pp. 123-127
    • Szybalski, W.1    Kubinski, H.2    Sheldrick, P.3
  • 2
    • 0014303831 scopus 로고
    • Seapration of B. subtilis DNA into complementary strands. II. Template functions and composition as determined by transcription with RNA polymerase
    • Karkas JD, Rudner R, Chargaff E: Seapration of B. subtilis DNA into complementary strands. II. Template functions and composition as determined by transcription with RNA polymerase. Proc Natl Acad Sci U S A 1968, 60(3):915-920.
    • (1968) Proc. Natl. Acad. Sci. U. S. A. , vol.60 , Issue.3 , pp. 915-920
    • Karkas, J.D.1    Rudner, R.2    Chargaff, E.3
  • 3
    • 0014294090 scopus 로고
    • Separation of B. subtilis DNA into complementary strands, I. Biological properties
    • Rudner R, Karkas JD, Chargaff E: Separation of B. subtilis DNA into complementary strands, I. Biological properties. Proc Natl Acad Sci U S A 1968, 60(2):630-635.
    • (1968) Proc. Natl. Acad. Sci. U. S. A. , vol.60 , Issue.2 , pp. 630-635
    • Rudner, R.1    Karkas, J.D.2    Chargaff, E.3
  • 4
    • 0033531431 scopus 로고    scopus 로고
    • Deviations from Chargaff's second parity rule correlate with direction of transcription
    • Bell SJ, Forsdyke DR: Deviations from Chargaff's second parity rule correlate with direction of transcription. J Theor Biol 1999, 197(1):63-76.
    • (1999) J. Theor. Biol. , vol.197 , Issue.1 , pp. 63-76
    • Bell, S.J.1    Forsdyke, D.R.2
  • 7
    • 0033993536 scopus 로고    scopus 로고
    • The vaccinia virus A14.5L gene encodes a hydrophobic 53-amino-acid virion membrane protein that enhances virulence in mice and is conserved among vertebrate poxviruses
    • Betakova T, Wolffe EJ, Moss B: The vaccinia virus A14.5L gene encodes a hydrophobic 53-amino-acid virion membrane protein that enhances virulence in mice and is conserved among vertebrate poxviruses. J Virol 2000, 74(9):4085-4092.
    • (2000) J. Virol. , vol.74 , Issue.9 , pp. 4085-4092
    • Betakova, T.1    Wolffe, E.J.2    Moss, B.3
  • 8
    • 0026589443 scopus 로고
    • Characterization of a 7-kilodalton subunit of vaccinia virus DNA-dependent RNA polymerase with structural similarities to the smallest subunit of eukaryotic RNA polymerase II
    • Amegadzie BY, Ahn BY, Moss B: Characterization of a 7-kilodalton subunit of vaccinia virus DNA-dependent RNA polymerase with structural similarities to the smallest subunit of eukaryotic RNA polymerase II. J Virol 1992, 66(5):3003-3010.
    • (1992) J. Virol. , vol.66 , Issue.5 , pp. 3003-3010
    • Amegadzie, B.Y.1    Ahn, B.Y.2    Moss, B.3
  • 11
    • 0038128634 scopus 로고    scopus 로고
    • Poxvirus orthologous clusters: Toward defining the minimum essential poxvirus genome
    • Upton C, Slack S, Hunter AL, Ehlers A, Roper RL: Poxvirus orthologous clusters: toward defining the minimum essential poxvirus genome. J Virol 2003, 77(13):7590-7600.
    • (2003) J. Virol. , vol.77 , Issue.13 , pp. 7590-7600
    • Upton, C.1    Slack, S.2    Hunter, A.L.3    Ehlers, A.4    Roper, R.L.5
  • 12
    • 0034120599 scopus 로고    scopus 로고
    • Screening predicted coding regions in poxvirus genomes
    • Upton C: Screening predicted coding regions in poxvirus genomes. Virus Genes 2000, 20(2):159-164.
    • (2000) Virus Genes , vol.20 , Issue.2 , pp. 159-164
    • Upton, C.1
  • 13
    • 0034663280 scopus 로고    scopus 로고
    • Complete genomic sequence of the Amsacta moorei entomopoxvirus: Analysis and comparison with other poxviruses
    • Bawden AL, Glassberg KJ, Diggans J, Shaw R, Farmerie W, Moyer RW: Complete genomic sequence of the Amsacta moorei entomopoxvirus: analysis and comparison with other poxviruses. Virology 2000, 274(1):120-139.
    • (2000) Virology , vol.274 , Issue.1 , pp. 120-139
    • Bawden, A.L.1    Glassberg, K.J.2    Diggans, J.3    Shaw, R.4    Farmerie, W.5    Moyer, R.W.6
  • 14
    • 25444486419 scopus 로고    scopus 로고
    • DNAGrapher: DNAGrapher
    • DNAGrapher: DNAGrapher. [http://athena.bioc.uvic.ca/pbr/graphDNA].
  • 15
    • 25444514500 scopus 로고    scopus 로고
    • Viral Orthologous Clusters (VOCS)
    • Viral Orthologous Clusters (VOCS) [http://www.virology.ca/pbr/vocs]
  • 16
    • 0029805251 scopus 로고    scopus 로고
    • A simple vectorial representation of DNA sequences for the detection of replication origins in bacteria
    • Lobry JR: A simple vectorial representation of DNA sequences for the detection of replication origins in bacteria. Biochimie 1996, 78(5):323-326.
    • (1996) Biochimie , vol.78 , Issue.5 , pp. 323-326
    • Lobry, J.R.1
  • 17
    • 0023852951 scopus 로고
    • A backtranslation method based on codon usage strategy
    • Pesole G, Attimonelli M, Liuni S: A backtranslation method based on codon usage strategy. Nucleic Acids Res 1988, 16(5):1715-1728.
    • (1988) Nucleic Acids Res. , vol.16 , Issue.5 , pp. 1715-1728
    • Pesole, G.1    Attimonelli, M.2    Liuni, S.3
  • 18
    • 25444505670 scopus 로고    scopus 로고
    • Codontree: Codontree
    • Codontree: Codontree. [http://bioweb.pasteur.fr/seqanal/interfaces/codontree.html].


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.