Alkane-induced expression, substrate binding profile, and immunolocalization of a cytochrome P450 encoded on the nifD excision element of Anabaena 7120

BMC Microbiology

Volumn 5, Issue , 2005, Pages

  Torres, Sergio ^a   Fjetland, Conrad R ^b   Lammers, Peter J ^a  

^a NEW MEXICO STATE UNIVERSITY   (United States)

^b UNIVERSITY OF TEXAS AT AUSTIN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALKANE; ALKANE 1 MONOOXYGENASE; BINDING PROTEIN; CYTOCHROME P450; DODECANE; HEXADECANE; HEXANE; LONG CHAIN FATTY ACID; MESSENGER RNA; OCTANE; SATURATED FATTY ACID; UNSATURATED FATTY ACID;

AMINO ACID SEQUENCE; ANABAENA; ARTICLE; CONTROLLED STUDY; CYANOBACTERIUM; GENE EXPRESSION; IMMUNOLOCALIZATION; MORPHOLOGY; NITROGEN FIXATION; NONHUMAN; PHOTOTROPHIC BACTERIUM; PROTEIN BINDING; PROTEIN EXPRESSION; PROTEIN FOLDING; SPECTROSCOPY;

ALKANES; ANABAENA; BACTERIAL PROTEINS; CYTOCHROME P-450 ENZYME SYSTEM; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENES, BACTERIAL; PROTEIN BINDING; RNA, MESSENGER; SUBSTRATE SPECIFICITY;

ANABAENA; BACTERIA (MICROORGANISMS); CYANOBACTERIA; NOSTOC SP. PCC 7120;

EID: 18044364585     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-5-16     Document Type: Article

References (40)

1. Wolk CP, Ernst A, Elhai J: Heterocyst metabolism and development. In The Molecular Biology of Cyanobacteria Edited by: Bryant D. Dordrecht. The Netherlands: Kluwer Academic Publishers; 1994:769-823.
2. Golden JW, Robinson SJ, Haselkorn R: Rearrangement of nitrogen fixation genes during heterocyst differentiation in the cyanobacterium. Anabaena 1985, 314:419-423.
3. Carrasco CD, Buettner JA, Golden JW: Programed DNA rearrangement of a cyanobacterial hupL gene in heterocysts. Proc Natl Acad Sci USA 1995, 92:791-795.
4. Lammers PJ, Golden JW, Haselkorn R: Identification and sequence of a gene required for a developmentally regulated DNA excision in Anabaena. Cell 1986, 44:905-911.
5. Haselkorn R: Developmentally regulated gene rearrangements in prokaryotes. Annu Rev Genet 1992, 26:113-130.
6. Carrasco CD, Golden JW: Heterocyst-specific DNA rearrangements of nif operons in Anabaena cylindrica and Nostoc sp strain MAC. Microbiology 1995, 141:2479-2487.
7. Barnum SR, Gendel SM: Organization of nitrogen fixation genes in a nonheterocystous filamentous cyanobacterium. FEMS Microbiol Lett 1985, 29:339-342.
8. Kallas T, Coursin T, Rippka R: Different organization of nif genes in nonheterocystous and heterocystous cyanobacteria. Plant Mol Biol 1985, 5:321-329.
9. Brusca JS, Chastain CJ, Golden JW: Expression of the Anabaena sp. Strain PCC 7120 xisA gene from a heterologous promoter Results in excision of the nifD element. J Bacteriol 1990, 172:3925-3931.
10. Lammers PJ, McLaughlin S, Papin S, Trujillo-Provencio C, Ryncarz AJ: Developmental rearrangement of cyanobacterial nif genes: nucleotide sequence, open reading frames, and cytochrome P-450 homology of the Anabaena sp. strain PCC 7120 nifD element. J Bacteriol 1990, 172:6981-6990.
11. BM3 and other inducible bacterial P450 cytochromes: Biochemistry and regulation. Ann Rev Pharm Toxicol 1991, 31:177-203.
12. Asperger O, Wirkner K, Schmidt M, Flechsig E: Detection of diverse cytochrome P450-dependent bio-oxygenation catalysts in microorganisms using a multipurpose inducer. Biocatalysis 1994, 10:233-246.
13. Torres S, Fjetland CR, Lammers PJ: Expression of cyp110 and Immunolocalization of a cyanobacterial cytochrome P450 in Anabaena sp. strain PCC 7120. FASEB J 1997, 11:P247.
14. Asai R, Nakamura C, Ikebukuro K, Karube I, Miyake J: A bioassay to detect contaminant-induced messenger RNA using a transcriptomics approach: Detection of RT-PCR-amplified single-stranded DNA based on the SPR sensor in cyanobacteria. Anal Lett 2003, 36:1475-1491.
15. Vrba JM, Curtis SE: Characterization of a four-member psbA gene family from the cyanobacterium Anabaena PCC 7120. Plant Mol Biol 1989, 14:81-92.
16. Fjetland CR: Characterization of CYP110: A cytochrome P450 from Anabaena sp. Strain PCC 7120. In PhD Dissertation New Mexico State University; 1999.
17. Capdevila JH, Falck JR, Estabrook RW: Cytochrome P450 and the arachidonate cascade. FASEB J 1992, 6:731-736.
18. Sawamurav A, Kusunose E, Satouchi K, Kusunose M: Catalytic properties of rabbit kidney fatty acid omega-hydroxylase cytochrome P-450ka2 (CYP4A7). Biochim Biophys Act 1993, 1168:30-36.
19. Alterman MA, Chaurasia CS, Lu P, Hardwick JP: Fatty acid discrimination and omega-hydroxylation by cytochrome P450 4A1 and a cytochrome P4504A1/NADPH-P450 reductase fusion protein. Arch Biochem Biophys 1995:289-296.
20. Lu P, Alterman MA, Chaurasia CS, Bambal RB, Hanzlik RP: Hemecoordinating analogs of lauric acid as inhibitors of fatty acid omega-hydroxylation. Arch Biochem Biophys 1997, 37:1-7.
21. Mueller EJ, Loida PJ, Sligar SG: Cytochrome P450, Structure, Mechanism and Biochemistry:. Plenum Press, New York; 1995:83-124.
22. camgene cloning and expression in Pseudomonas putida and Escherichia coli. Biochem Biophys Res Commun 1985, 130:412-417.
23. Omer CA, Lenstra R, Litle PJ, Dean C, Tepperman JM, Leto KJ, Romesser JA, O'Keefe DP: Gene for two herbicide-inducible cytochromes P450 from Streptomyces griseolus. J Bacteriol 1990, 172:3335-3345.
24. Theis T, Backhaus T, Bossmann B, Grimme LH: Xenobiotic biotransformation in unicellular green algae. Plant Physiol 1996, 112:361-370.
25. Al Hassan ARH, Sorkhoh NA, Al Bader DA, Radwan SS: Utilization of hydrocarbons by cyanobacteria from microbial mats on oily coasts of the Arabian gulf. Appl Microbiol Biotechnol 1994:615-619.
26. Cardini G, Jurtshuk P: Cytochrome P450 involvement in the oxidation of n-octane by cell free extracts of Corynebacterium sp. Strain 7E1C. J Biol Chem 1968, 243:6070-6072.
27. Asperger O, Muller R, Kleber HP: Reconstitution of n-alkane oxidizing activity of a purified cytochrome P450 from Acinetobacter calcoaceticus strain EB104. In Developments in Biochemistry, Cytochrome P450: Biochemistry, Biophysics, and Induction Edited by: Vereczkey L, Magyar K. New York, NY, Elsevier Science Publishers; 1985.
28. Al Hassan RH, Al Bader DA, Sorkhoh NA, Radwan SS: Evidence for n-alkane consumption and oxidation by filamentouts cyaonbacteria from oil contaminated coasts of the Arabian gulf. Marine Biol 1988, 130:521-527.
29. Scheller U, Zimmer T, Kargel E, Schunck WH: Characterization of the n-alkane and fatty-acid hydroxylating cytochrome-p450 forms 52A3 and 52A4. Arch Biochem Biophys 1996, 328:245-254.
30. Imai Y: Characterization of rabbit liver cytochrome P-450 (laurate omega-1 hydroxylase) synthesized in transformed yeast cells. J Biochem 1988, 103:143-148.
31. Appleby CA, Truner GL, Macnicol PK: Involvement of oxyleghaemoglobin and cytochrome P450 in an efficient oxidative phosphorylation pathway which supports nitrogen fixation in Rhizobium. Biochim Biophys Acta 1975, 387:461-474.
32. Tully RE, Keister DL: Cloning and mutagenesis of a cytochrome-P-450 locus from Bradyrhizobium japonicum that is expressed anaerobically and symbiotically. Appl Environ Microbiol 1993:4136-4142.
33. Tully RE, Vanberkum P, Lovins KW, Keister DL: Identification and sequencing of a cytochrome-P450 gene-cluster from Bradyrhizobium-japonicum. Biochim et Biophys Acta 1998, 1398:243-255.
34. Freiberg C, Fellay R, Bairoch A, Broughton WJ, Rosenthal A, Perret X: Molecular basis of symbiosis between Rhizobium and legumes. Nature 1997, 387:394-401.
35. Asperger O, Steinbrenner H, Lehmann A, Petsch M, Griengl H: Induction and functional role of cytochromes P450 in the filamentous fungi Mortierella alpina ATCC 8979 and Cunninghamella blakesleeana DSM 1906 during hydroxylation of cycloalkylbenzoxazoles. Applied Microbiology and Biotechnology 1999, 51:516-522.
36. Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, Lee M, Roth A, Sudarsan N, Jona I, Wickiser JK, Breaker RR: New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control. Proc Natl Acad Sci USA 2004, 101:6421-6426.
37. Wilkins TA, Smart LB: Isolation of RNA from plant tissue. In A Laboratory Guide to RNA Edited by: Krieg PA. New York, NY: J Wiley & Sons; 1996:21-24.
38. Laemmli UK: Cleavage of structural proteins during the assembly of the head of the bacteriophage T4. Nature 1970, 227:680-685.
39. Harlowe E, Lane D: Antibodies: A laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory; 1988.
40. Omura T, Sato R: The Carbon Monoxide-binding Pigment of Liver Microsomes. ii. Solubilization, Purification, and Properties. J Biol Chem 1964, 239:2370-2378.