Construction and characterization of a Plasmodium vivax genomic library in yeast artificial chromosomes

Genomics

Volumn 42, Issue 3, 1997, Pages 467-473

  Camargo, Anamaria A ^a   Fischer, Katja ^b   Lanzer, Michael ^b   Del Portillo, Hernando A ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b UNIVERSITY OF WÜRZBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DNA LIBRARY; GENE CONSTRUCT; GENE LIBRARY; GENETIC ANALYSIS; HUMAN; HUMAN CELL; PLASMODIUM VIVAX; PRIORITY JOURNAL; TELOMERE; YEAST ARTIFICIAL CHROMOSOME;

PLASMODIUM VIVAX;

EID: 17644448812     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1997.4758     Document Type: Article

References (38)

1. Baruch, D. I., Pasloske, B. L., Singh, H. B., Bi, X., Ma, X. C., Feldman, M., Taraschi, T. F., and Howard, R. J. (1995). Cloning the P. falciparum gene encoding PfEMP1, a malarial variant antigen and adherence receptor on the surface of parasitised human erythrocytes. Cell 82: 77-87.
2. Brownstein, B. H., Silverman, G. A., Little, R. D., Burke, D. T., Krosmeyer, S. J., Schlessinger, D., and Oslon, M. V. (1989). Isolation of single-copy human genes from a library of yeast artificial chromosome clones. Science 244: 1348-1351.
3. Burke, D. T., Carle, G. F., and Oslon, M. V. (1987). Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors. Science 236: 806-812.
4. Camargo, A. A., Fisher, K., and Lanzer, M. (1997). Construction and rapid screening of a representative yeast artificial chromosome library from the Plasmodium falciparum strain Dd2. Parasitol. Res. 83: 87-89.
5. Cheng, Q., and Saul, A. J. (1994). Sequence analysis of the apical membrane antigen 1 (AMA-1) of Plasmodium vivax. Mol. Biochem. Parasitol. 65: 183-187.
6. Connelly, C., McCormick, M. K., Shero, J., and Hieter, P. (1991). Polyamines eliminate an extreme size bias against transformation of large yeast artificial chromosome DNA. Genomics 10: 10-16.
7. David, P. H., del Portillo, H.A., and Mendis, K. N. (1988). Plasmodium vivax malaria: Parasite biology defines potential targets for vaccine development. Biol. Cell 64: 251-260.
8. De Bruin, D., Lanzer, M., and Ravetch, J. V. (1992). Characterisation of yeast artificial chromosomes from Plasmodium falciparum: Construction of a stable, representative library and cloning of telomeric DNA fragments. Genomics 14: 332-339.
9. De Bruin, D., Lanzer, M., and Ravetch, J. V. (1994). The polymorphic subtelomeric regions of Plasmodium falciparum chromosomes contain arrays of repetitive sequences elements. Proc. Natl. Acad. Sci. USA 91: 619-623.
10. del Portillo, H. A., Longacre, S., Khouri, E., and David, P. H. (1991). Primary structure of the merozoite surface antigen 1 of Plasmodium vivax reveals sequences conserved between different Plasmodium species. Proc. Natl. Acad. Sci. USA 88: 4030-4034.
11. Fang, X. D., Kaslow, D. C., Adams, J. H., and Miller, L. H. (1991). Cloning of the Plasmodium vivax Duffy receptor. Mol. Biochem. Parasitol. 44: 125-132.
12. Foster, J., and Thompsom, J. (1995). The Plasmodium falciparum genome project: A resource for researchers. Parasitol. Today 11: 1-4.
13. Foote, S. J., and Kemp, D. J. (1989). Chromosomes of malaria parasites. Trends Genet. 5: 337-342.
14. Galinski, M. R., Medina, C. C., Ingravallo, P., and Barnwell, J. W. (1992). A reticulocyte-binding protein complex of Plasmodium vivax merozoites. Cell 69: 1213-1226.
15. Galinski, M. R., and Barnwell, J. W. (1996). Plasmodium vivax: Merozoites invasion of reticulocytes and considerations for malaria vaccine development. Parasitol. Today 12: 20-29.
16. Green, E. D., and Olson, M. V. (1990). Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc. Natl. Acad. Sci. USA 87: 1213-1217.
17. Janse, C. J. (1993). Chromosome size polymorphism and DNA rearrangements in Plasmodium. Parasitol. Today 9: 19-22.
18. Janse, C. J., Camargo, A. A., del Portillo, H. A., Herrera, S., Kumlien, S., Mons, B., Thomas, A., and Waters, A. P. (1994). Removal of leukocytes from Plasmodium vivax-infected blood. Ann. Trop. Med. Parasitol. 88: 213-216.
19. Kimura, E., Mattei, D., di Santi, S. M., and Scherf, A. (1990). Genetic diversity in the major merozoite surface antigen of Plasmodium falciparum: High prevalence of a third polymorphic form detected in strains derived from malaria patients. Gene 91: 57-62.
20. Langsley, G., Patarapotikul, J., Handunnetti, S., Khouri, E., Mendis, K. N., and David, P. H. (1988). Plasmodium vivax: Karyotype polymorphism of field isolates. Exp. Parasitol. 67: 301-306.
21. Lanzer, M., De Bruin, D., and Ravetch, J. V. (1993). Transcriptional differences in polymorphic and conserved domains of a complete cloned P. falciparum chromosome. Nature 361: 654-657.
22. Lanzer, M., Fisher, K., and Le Blancq, S. M. (1995). Parasitism and chromosome dynamics in protozoan parasites: Is there a connection? Mol. Biochem. Parasitol. 70: 1-2.
23. Li, J., Wirtz, R. A., McConkey, G. A., Sattabonghot, J., and McCutchan, T. F. (1994). Transition of Plasmodium vivax ribosome types corresponds to sporozoite differentiation in the mosquito. Mol. Biochem. Parasitol. 65: 283-289.
24. McCormick, M. K., Shero, J. H., Connelly, C., Antonarakis, S. E., and Heiter, P. (1990). Methods for cloning large DNA segments as artificial chromosomes in Saccharomyces cerevisiae. Technique 2: 65-71.
25. McCutchan, T. F., Dame, J. B., Miller, L. H., and Barnwell, J. (1984). Evolutionary relatedness of Plasmodium species as determined by the structure of DNA. Science 225: 808-811.
26. Peterson, D. S., Miller, L. H., and Wellems, T. E. (1995). Isolation of multiple sequences from the Plasmodium falciparum genome that encode conserved domains homologous to those in erythrocytebinding proteins. Proc. Natl. Acad. Sci. USA 92: 7100-7104.
27. Porto, M., Ferreira, M. U., Camargo, L. M. A., Premawansa, S., and del Portillo, H. A. (1992). Second form in a segment of the merozoite surface protein 1 gene of Plasmodium vivax among isolates from Rondônia (Brazil). Mol. Biochem. Parasitol. 54: 121-124.
28. Ravetch, J. V. (1989). Chromosomal polymorphism and gene expression in Plasmodium falciparum. Exp. Parasitol. 68: 121-125.
29. Rosenberg, R., Wirtz, R. A., Lanar, D. E., Sattabongkot, J., Hall, T., Waters, A. P., and Prasittisuk, C. (1989). Circumsporozoite protein heterogeneity in the human malaria parasite Plasmodium vivax. Science 245: 973-976.
30. Rosenthal, P. J., Ring, C. S., Chen, X., and Cohen, F. E. (1994). Characterisation of a Plasmodium vivax cysteine proteinase gene identifies uniquely conserved amino acids that may mediate the substrate specificity of malarial hemoglobinases. J. Mol. Biol. 241: 312-316.
31. Ross, M. T., Hoheisel, J. D., Monaco, A. P., Larin, Z., Zehetner, G., and Lehrach, H. (1992). High density gridded YAC filters: Their potential as genome mapping tools. In "Techniques for the Analysis of Complex Genomes" (R. Anand, Ed.), pp. 137-153, Academic Press Ltd., London.
32. Rubio, J. P., Thompson, J. K., and Cowman, A. F. (1996). The var genes of Plasmodium falciparum are located in the subtelomeric region of most chromosomes. EMBO J. 15: 4069-4077.
33. Saiki, R., Scharf, S., Faloona, F., Mullis, K. B., Horn, G. T., Erlich, H. A., and Arnheim, N. (1985). Enzymatic amplification of β-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230: 1350-1354.
34. Sherman, F., Fink, G. R., and Hicks, J. B. (1986). "Methods in Yeast Genetics," Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
35. Smith, J. D., Chitnis, C. E., Craig, A. G., Roberts, D. J., Hudson-Taylor, D. E., Peterson, D. S., Pinches, R., Newbold, C. I., and Miller, L. H. (1995). Switches in expression of Plasmodium falciparum var genes correlate with changes in antigenic and cytoadherent phenotypes of infected erythrocytes. Cell 82: 101-110.
36. Su, X., Heatwole, V. M., Wertheimer, S. P., Guinet, F., Herrfeldt, J. A., Peterson, D. S., Ravetch, J. A., and Wellems, T. E. (1995). The large diverse gene family var encodes proteins involved in cytoadherence and antigenic variation of Plasmodium falciparum-infected erythrocytes. Cell 82: 89-100.
37. Vinkenoog, R., Veldhuisen, B., Sperança, M. A., del Portillo, H. A., Janse, C., and Waters, A. P. (1995). Comparison of introns in a cdc2-homologous gene within a number of Plasmodium species. Mol. Biochem. Parasitol. 71: 233-241.
38. Weber, J. L. (1988). Molecular biology of malaria parasites. Exp. Parasitol. 66: 143-170.