The dual origin of the Malagasy in Island Southeast Asia and East Africa: Evidence from maternal and paternal lineages

American Journal of Human Genetics

Volumn 76, Issue 5, 2005, Pages 894-901

  Hurles, Matthew E ^a,b   Sykes, Bryan C ^c   Jobling, Mark A ^d   Forster, Peter ^b  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d UNIVERSITY OF LEICESTER   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

MITOCHONDRIAL DNA;

AFRICA; ARTICLE; BORNEO; CHROMOSOME MAP; CHROMOSOME POLYMORPHISM; DATA BASE; ETHNOLOGY; GENE SEQUENCE; GENETIC LINKAGE; GENETIC VARIABILITY; HUMAN; INDONESIA; LINGUISTICS; MADAGASCAR; MALE; POPULATION GENETICS; PRIORITY JOURNAL; SOUTHEAST ASIA; Y CHROMOSOME; Y CHROMOSOME LINKAGE;

EID: 17644407717     PISSN: 00029297     EISSN: None     Source Type: Journal    
DOI: 10.1086/430051     Document Type: Article

References (34)

1. Adelaar A (1995) Asian roots of the Malagasy: a linguistic perspective. Bijdragen tot de Taal-Land en Volkenkunde 151:325-356
2. Belgrader P, Marino MM, Lubin M, Barany F (1996) A multiplex PCR-ligase detection reaction assay for human identity testing. Genome Sci Technol 1:77-87
3. Burney DA, Burney LP, Godfrey LR, Jungers WL, Goodman SM, Wright HT, Jull AJ (2004) A chronology for late prehistoric Madagascar. J Hum Evol 47:25-63
4. Chakraborty R (1986) Gene admixture in human populations: models and predictions. Yearb Phys Anthropol 29:1-43
5. Chakraborty R, Weiss KM (1988) Admixture as a tool for finding linked genes and detecting that difference from allelic association between loci. Proc Natl Acad Sci USA 85:9119-9123
6. Dahl OC (1951) Malgache et Maanyan: une comparison linguistique. Egede Intitutett, Oslo
7. _ (1988) Bantu substratum in Malagasy. Études Océan Indien 9:91-132
8. Dean FB, Hosono S, Fang L, Wu X, Faruqi AF, Bray-Ward P, Sun Z, Zong Q, Du Y, Du J, Driscoll M, Song W, Kingsmore SF, Egholm M, Lasken RS (2002) Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci USA 99:5261-5266
9. Dewar RE, Wright HT (1993) The culture history of Madagascar. J World Prehistory 7:417-466
10. Duplantier JM, Orth A, Catalan J, Bonhomme F (2002) Evidence for a mitochondrial lineage originating from the Arabian peninsula in the Madagascar house mouse (Mus musculus). Heredity 89:154-158
11. Fix AG (1999) Migration and colonisation in human microevolution. Cambridge University Press, Cambridge, United Kingdom
12. Forster L, Forster P, Lutz-Bonengel S, Willkomm H, Brinkmann B (2002a) Natural radioactivity and human mitochondrial DNA mutations. Proc Natl Acad Sci USA 99:13950-13954
13. Forster P, Cali F, Röhl A, Metspalu E, D'Anna R, Mirisola M, De Leo G, Flugy A, Salerno A, Ayala G, Kouvatsi A, Villems R, Romano V (2002b) Continental and subcontinental distributions of mtDNA control region types. Int J Legal Med 116:99-108
14. Halder I, Shriver MD (2003) Measuring and using admixture to study the genetics of complex diseases. Hum Genomics 1:52-62
15. Hewitt R, Krause A, Goldman A, Campbell G, Jenkins T (1996) β-globin haplotype analysis suggests that a major source of Malagasy ancestry is derived from Bantu-speaking Negroids. Am J Hum Genet 58:1303-1308
16. Hurles ME, Matisoo-Smith E, Gray RD, Penny D (2003a) Untangling Oceanic settlement: the edge of the knowable. Trends Ecol Evol 18:531-540
17. Hurles ME, Maund E, Nicholson J, Bosch E, Renfrew C, Sykes BC, Jobling MA (2003b) Native American Y chromosomes in Polynesia: the genetic impact of the Polynesian slave trade. Am J Hum Genet 72:1282-1287
18. Hurles ME, Nicholson J, Bosch E, Renfrew C, Sykes BC, Jobling MA (2002) Y chromosomal evidence for the origins of Oceanic-speaking peoples. Genetics 160:289-303
19. Jobling MA, Hurles ME, Tyler-Smith C (2004) Human evolutionary genetics: origins, peoples and disease. Garland Science, New York
20. Jobling MA, Tyler-Smith C (2003) The human Y chromosome: an evolutionary marker comes of age. Nat Rev Genet 4:598-612
21. Kivisild T, Tolk HV, Parik J, Wang Y, Papiha SS, Bandelt HJ, Villems R (2002) The emerging limbs and twigs of the East Asian mtDNA tree. Mol Biol Evol 19:1737-1751
22. Long JC (1991) The genetic structure of admixed populations. Genetics 127:417-428
23. Luis JR, Rowold DJ, Regueiro M, Caeiro B, Cinnioǧlu C, Roseman C, Underhill PA, Cavalli-Sforza LL, Herrera RJ (2004) The Levant versus the Horn of Africa: evidence for bidirectional corridors of human migrations. Am J Hum Genet 74:532-544
24. Migot F, Perichon B, Danze PM, Raharimalala L, Lepers JP, Deloron P, Krishnamoorthy R (1995) HLA class II haplotype studies bring molecular evidence for population affinity between Madagascans and Javanese. Tissue Antigens 46:131-135
25. Paracchini S, Arredi B, Chalk R, Tyler-Smith C (2002) Hierarchical high-throughput SNP genotyping of the human Y chromosome using MALDI-TOF mass spectrometry. Nucleic Acids Res 30:e27
26. Pereira L, Macaulay V, Torroni A, Scozzari R, Prata MJ, Amorim A (2001) Prehistoric and historic traces in the mtDNA of Mozambique: insights into the Bantu expansions and the slave trade. Ann Hum Genet 65:439-458
27. Pfaff CL, Parra EJ, Bonilla C, Hiester K, McKeigue PM, Kamboh MI, Hutchinson RG, Ferrell RE, Boerwinkle E, Shriver MD (2001) Population structure in admixed populations: effect of admixture dynamics on the pattern of linkage disequilibrium. Am J Hum Genet 68:198-207
28. Roberts DF, Hiorns RW (1962) The dynamics of racial ad-mixture. Am J Hum Genet 14:261-277
29. Röhl A, Brinkmann B, Forster L, Forster P (2001) An annotated mtDNA database. Int J Legal Med 115:29-39
30. Soodyall H, Jenkins T, Stoneking M (1995) "Polynesian" mtDNA in the Malagasy. Nat Genet 10:377-378
31. Telenius H, Carter NP, Bebb CE, Nordenskjold M, Ponder BA, Tunnacliffe A (1992) Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer. Genomics 13:718-725
32. Vérin P, Wright H (1999) Madagascar and Indonesia: new evidence from archaeology and linguistics. Indo Pac Prehist Assoc Bull 18:35-42
33. Wang J (2003) Maximum-likelihood estimation of admixture proportions from genetic data. Genetics 164:747-765
34. Y Chromosome Consortium (YCC) (2002) A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Res 12:339-348