Genetic relatedness among eastern North American blackberry cultivars based on pedigree analysis

Euphytica

Volumn 139, Issue 2, 2004, Pages 95-104

  Stafne, Eric T ^a   Clark, John R ^a  

^a UNIVERSITY OF ARKANSAS   (United States)

Author keywords

Fruit breeding; Inbreeding; Rubus subgenus Rubus

Indexed keywords

RUBUS;

EID: 17644406444     PISSN: 00142336     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10681-004-2436-4     Document Type: Article

References (32)

1. Alice, L.A. & C.S. Campbell, 1999. Phylogeny of Rubus (Rosaceae) based on nuclear ribosomal DNA internal transcribed spacer region sequences. Amer J Bot 86: 81-97.
2. Barr, A.J., 1983. The inbreed procedure. In: S.P. Joyner (Ed.), SUGI Supplemental Library User's Guide, 1983 edn., pp. 121-130. SAS Inst., Cary, NC.
3. Clark, J.R., 1999. The blackberry breeding program at the University of Arkansas: Thirty-plus years of progress and developments for the future. Acta Hort 505: 73-77.
4. Dale, A., P.P. Moore, R.J. McNicol, T.M. Sjulin & L.A. Burmistrov, 1993. Genetic diversity of red raspberry varieties throughout the world. J Amer Soc Hort Sci 118: 119-129.
5. Darrow, G.M., 1937. Blackberry and raspberry improvement. In: Better Plants and Animals 2, pp. 496-533. USDA Yearbook of Agriculture.
6. Darrow, G.M., 1967. The cultivated raspberry and blackberry in North America - Breeding and improvement. Amer Hort Mag 46: 202-218.
7. Degani, C., L.J. Rowland, J.A. Saunders, S.C. Hokanson, E.L. Ogden, A. Golan-Goldhirsh & G.J. Galleta, 2001. A comparison of genetic relationship measures in strawberry (Fragaria x ananassa Duch.) based on AFLPs, RAPDs, and pedigree data. Euphytica 117: 1-12.
8. Falconer, D.S. & T.F.C. Mackay, 1996. Introduction to quantitative genetics. 4th edn., Longman, Essex, England.
9. Graham, J. & R.J. McNicol, 1995. An examination of the ability of RAPD markers to determine the relationships within and between Rubus species. Theor Appl Genet 90: 1128-1132.
10. Graham, J., R.J. McNicol, K. Greig & W.T.G. van de Ven, 1994. Identification of red raspberry cultivars and an assessment of their relatedness using fingerprints produced by random primers. J Hort Sci 69: 123-130.
11. Graham, J., G.R. Squire, B. Marshall & R.E. Harrison. 1997. Spatially dependent genetic diversity within and between colonies of wild raspberry Rubus idaeus detected using RAPD markers. Mol Ecol 6: 1001-1008.
12. Hall, H.K., 1990. Blackberry breeding. In: J. Janick (Ed.), Plant Breeding Reviews, Vol. 8, pp. 249-312. Timber Press, Portland, Ore.
13. Hancock, J.F., Jr. & J.H. Siefker, 1982. Levels of inbreeding in high-bush blueberry cultivars. HortScience 17: 363-366.
14. Hedrick, U.P., 1925. The small fruits of New York. J.B. Lyon Co., Albany, N.Y.
15. Jennings, D.L., 1967. Balanced lethals and polymorphism in Rubus idaeus. Heredity 22: 465-479.
16. Jennings, D.L., 1972. Aberrant segregation of a gene in the raspberry and its association with effects on seed development. Heredity 29: 83-90.
17. Lewers, K.S., E.T. Stafne, J.R. Clark, C. Weber & J. Graham, 2004. Simple sequence repeat (SSR) markers for raspberry and blackberry. HortScience 39(4): 785 (abstr.).
18. Lima, M.L.A., A.A.F. Garcia, K.M. Oliveira, S. Matsuoka, H. Arizono, C.L. de Souza Jr. & A.P. de Souza, 2002. Analysis of genetic similarity detected by AFLP and coefficient of parentage among genotypes of sugar cane (Saccharum spp.). Theor Appl Genet 104: 30-38.
19. Lopez-Medina, J., J.N. Moore & R.W. McNew, 2000. A proposed model for inheritance of primocane fruiting in tetraploid erect blackberry. J Amer Soc Hort Sci 125: 217-221.
20. Mantel, N.A., 1967. The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209-220.
21. Moore, J.N., 1984. Blackberry breeding. HortScience 19: 183-185.
22. Nybom, H. & H.K. Hall, 1991. Minisatellite DNA 'fingerprints' can distinguish Rubus cultivars and estimate their degree of relatedness. Euphytica 53: 107-114.
23. Nybom, H., B.A. Schaal & S.H. Rogstad, 1989. DNA " fingerprints" can distinguish cultivars of blackberries and raspberries. Acta Hort 262: 305-310.
24. Ourecky, D.K., 1975. Brambles. In: J. Janick & J.N. Moore (Eds.), Advances in Fruit Breeding, pp. 98-129. Purdue University Press, West Lafayette, Indiana.
25. Pamfil, D., R.H. Zimmerman, S.K. Naess & H.J. Swartz, 2000. Investigation of Rubus breeding anomalies and taxonomy using RAPD analysis. Small Fruits Rev 1: 43-56.
26. Rohlf, F.J., 2000. NTSYS-pc numerical taxonomy and multivariate analysis system, version 2.1. Exeter Publishing, Ltd., Setauket, N.Y.
27. Sjulin, T.M. & A. Dale, 1987. Genetic diversity of North American strawberry cultivars. J Amer Soc Hort Sci 112: 375-385.
28. Stafne, E.T. & J.R. Clark, 2004. PediTrack - A simple pedigree program for lineage tracking. HortScience 39: 649 (abstr.).
29. Stafne, E.T., J.R. Clark, M.C. Pelto & J.T. Lindstrom, 2003. Discrimination of Rubus cultivars using RAPD markers and pedigree analysis. Acta Hort 626: 119-124.
30. Stafne, E.T., A.L. Szalanski & J.R. Clark, 2004. Nuclear ribosomal ITS region sequences for differentiation of Rubus genotypes. J. Ark. Acad. Sci. 57: 176-180.
31. Trople, D.D. & P.P. Moore, 1999. Taxonomic relationships in Rubus based on RAPD analysis. Acta Hort 505: 373-378.
32. Wright, S., 1922. Coefficients of inbreeding and relationship. Amer Nat 56: 330-338.