메뉴 건너뛰기




Volumn 348, Issue 4, 2005, Pages 999-1014

Pro-sequence and Ca2+-binding: Implications for folding and maturation of Ntn-hydrolase penicillin amidase from E. coli

Author keywords

Ca2+; Folding intermediate; Penicillin amidase; Pro peptide; Protein folding

Indexed keywords

CALCIUM ION; PENICILLIN AMIDASE; PROTEIN PRECURSOR; AMIDASE; CALCIUM; N TERMINAL NUCLEOPHILE HYDROLASE; N-TERMINAL NUCLEOPHILE HYDROLASE; UREA;

EID: 17444429637     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2005.03.005     Document Type: Article
Times cited : (24)

References (39)
  • 1
    • 0026605509 scopus 로고
    • A protein-folding reaction under kinetic control
    • D. Baker, J.L. Sohl, and D.A. Agard A protein-folding reaction under kinetic control Nature 356 1993 263 265
    • (1993) Nature , vol.356 , pp. 263-265
    • Baker, D.1    Sohl, J.L.2    Agard, D.A.3
  • 2
    • 0027451307 scopus 로고
    • Folding of subtilisin BPN': Role of the pro-sequence
    • J. Eder, M. Rheinnecker, and A.R. Fersht Folding of subtilisin BPN': role of the pro-sequence J. Mol. Biol. 233 1993 293 304
    • (1993) J. Mol. Biol. , vol.233 , pp. 293-304
    • Eder, J.1    Rheinnecker, M.2    Fersht, A.R.3
  • 3
    • 0027421103 scopus 로고
    • Intramolecular chaperones and protein folding
    • U.P. Shinde, and M. Inouye Intramolecular chaperones and protein folding Trends Biochem. Sci. 18 1993 442 446
    • (1993) Trends Biochem. Sci. , vol.18 , pp. 442-446
    • Shinde, U.P.1    Inouye, M.2
  • 5
    • 0032558779 scopus 로고    scopus 로고
    • Unfolded conformations of a-lytic protease are more stable than the native state
    • J.L. Sohl, S.S. Jaswal, and D.A. Agard Unfolded conformations of a-lytic protease are more stable than the native state Nature 395 1998 817 819
    • (1998) Nature , vol.395 , pp. 817-819
    • Sohl, J.L.1    Jaswal, S.S.2    Agard, D.A.3
  • 6
    • 0031788058 scopus 로고    scopus 로고
    • Structure of α-lytic protease complexed with its pro-region
    • N.K. Sauter, T. Mau, S.D. Rader, and D.A. Agard Structure of α-lytic protease complexed with its pro-region Nature Struct. Biol. 5 1998 945 950
    • (1998) Nature Struct. Biol. , vol.5 , pp. 945-950
    • Sauter, N.K.1    Mau, T.2    Rader, S.D.3    Agard, D.A.4
  • 7
    • 0026704807 scopus 로고
    • Protease pro region required for folding is a potent inhibitor of the mature enzyme
    • D. Baker, J. Silen, and D.A. Agard Protease pro region required for folding is a potent inhibitor of the mature enzyme Proteins: Struct. Funct. Genet. 12 1992 339 344
    • (1992) Proteins: Struct. Funct. Genet. , vol.12 , pp. 339-344
    • Baker, D.1    Silen, J.2    Agard, D.A.3
  • 8
    • 0033059499 scopus 로고    scopus 로고
    • A pathway for conformational diversity in proteins mediated by intramolecular chaperones
    • U. Shinde, X. Fu, and M. Inouye A pathway for conformational diversity in proteins mediated by intramolecular chaperones J. Biol. Chem. 274 1999 15615 15621
    • (1999) J. Biol. Chem. , vol.274 , pp. 15615-15621
    • Shinde, U.1    Fu, X.2    Inouye, M.3
  • 9
    • 0028145698 scopus 로고
    • The roles of the propeptide in maturation and secretion of Npr protease from Streptomyces
    • S.-Ch. Chang, P.-Ch. Chang, and Y.-H. W. Lee The roles of the propeptide in maturation and secretion of Npr protease from Streptomyces J. Biol. Chem. 269 1994 3548 3554
    • (1994) J. Biol. Chem. , vol.269 , pp. 3548-3554
    • Chang, S.-Ch.1    Chang, P.-Ch.2    Lee, Y.-H.W.3
  • 10
    • 0028846035 scopus 로고
    • Functional analysis of the propeptide of subtilisin e as an intramolecular chaperone for protein folding
    • Y. Li, Z. Hu, F. Jordans, and M. Inouye Functional analysis of the propeptide of subtilisin E as an intramolecular chaperone for protein folding J. Biol. Chem. 270 1995 25127 25132
    • (1995) J. Biol. Chem. , vol.270 , pp. 25127-25132
    • Li, Y.1    Hu, Z.2    Jordans, F.3    Inouye, M.4
  • 11
    • 0037674588 scopus 로고    scopus 로고
    • Folding pathway mediated by an intramolecular chaperone. A functional peptide chaperone designed using sequence databases
    • Y. Yabuta, E. Subbian, C. Oiry, and U. Shinde Folding pathway mediated by an intramolecular chaperone. A functional peptide chaperone designed using sequence databases J. Biol. Chem. 278 2003 15246 15251
    • (2003) J. Biol. Chem. , vol.278 , pp. 15246-15251
    • Yabuta, Y.1    Subbian, E.2    Oiry, C.3    Shinde, U.4
  • 12
    • 0029019483 scopus 로고
    • Pro-sequence-assisted protein folding
    • J. Eder, and A.R. Fersht Pro-sequence-assisted protein folding Mol. Microbiol. 16 1995 609 614
    • (1995) Mol. Microbiol. , vol.16 , pp. 609-614
    • Eder, J.1    Fersht, A.R.2
  • 13
    • 0022005270 scopus 로고
    • A new method for estimating synonymous and non-synonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes
    • W.-H. Li, C.-I. Wu, and C.-C. Lu A new method for estimating synonymous and non-synonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes Mol. Biol. Evol. 2 1985 150 174
    • (1985) Mol. Biol. Evol. , vol.2 , pp. 150-174
    • Li, W.-H.1    Wu, C.-I.2    Lu, C.-C.3
  • 14
    • 0034596066 scopus 로고    scopus 로고
    • Folding pathway mediated by an intramolecular chaperone. The inhibitory and chaperone functions of the subtilisin propeptide are not obligatorily linked
    • X.F. Fu, M. Inouye, and U.P. Shinde Folding pathway mediated by an intramolecular chaperone. The inhibitory and chaperone functions of the subtilisin propeptide are not obligatorily linked J. Biol. Chem. 275 2000 16871 16878
    • (2000) J. Biol. Chem. , vol.275 , pp. 16871-16878
    • Fu, X.F.1    Inouye, M.2    Shinde, U.P.3
  • 17
    • 0036088769 scopus 로고    scopus 로고
    • Unusual signal peptide directs penicillin amidase from E. coli to the Tat translocation machinery
    • Z. Ignatova, C. Hörnle, A. Nurk, and V. Kasche Unusual signal peptide directs penicillin amidase from E. coli to the Tat translocation machinery Biochem. Biophys. Res. Commun. 291 2002 146 149
    • (2002) Biochem. Biophys. Res. Commun. , vol.291 , pp. 146-149
    • Ignatova, Z.1    Hörnle, C.2    Nurk, A.3    Kasche, V.4
  • 18
    • 0034730417 scopus 로고    scopus 로고
    • Structure of a slow processing precursor penicillin acylase from Escherichia coli reveals the linker peptide blocking the active cleft
    • L. Hewitt, V. Kasche, K. Lummer, R.J. Lewist, G.N. Murshudov, and G.N. Verma Structure of a slow processing precursor penicillin acylase from Escherichia coli reveals the linker peptide blocking the active cleft J. Mol. Biol. 302 2000 887 898
    • (2000) J. Mol. Biol. , vol.302 , pp. 887-898
    • Hewitt, L.1    Kasche, V.2    Lummer, K.3    Lewist, R.J.4    Murshudov, G.N.5    Verma, G.N.6
  • 21
    • 0345256438 scopus 로고    scopus 로고
    • Fragments of pro-peptide activate mature penicillin amidase of Alcaligenes faecalis
    • V. Kasche, B. Galunsky, and Z. Ignatova Fragments of pro-peptide activate mature penicillin amidase of Alcaligenes faecalis Eur. J. Biochem. 270 2003 4721 4728
    • (2003) Eur. J. Biochem. , vol.270 , pp. 4721-4728
    • Kasche, V.1    Galunsky, B.2    Ignatova, Z.3
  • 22
    • 0025100583 scopus 로고
    • Primary structure requirements for the maturation in vivo of penicillin acylase from Escherichia coli ATCC 11105
    • D. Sizmann, C. Keilmann, and A. Böck Primary structure requirements for the maturation in vivo of penicillin acylase from Escherichia coli ATCC 11105 Eur. J. Biochem. 192 1990 143 151
    • (1990) Eur. J. Biochem. , vol.192 , pp. 143-151
    • Sizmann, D.1    Keilmann, C.2    Böck, A.3
  • 23
    • 0032884396 scopus 로고    scopus 로고
    • Crystal structure of penicillin G acylase from the Brol mutant strain of Providencia rettgeri
    • M.A. McDonough, H.E. Klei, and J.A. Kelly Crystal structure of penicillin G acylase from the Brol mutant strain of Providencia rettgeri Protein Sci. 8 1999 1971 1981
    • (1999) Protein Sci. , vol.8 , pp. 1971-1981
    • McDonough, M.A.1    Klei, H.E.2    Kelly, J.A.3
  • 24
    • 0026697771 scopus 로고
    • Effects of site-directed mutations on processing and activities of penicillin G acylase from Escherichia coli ATCC 11105
    • K.S. Choi, J.A. Kim, and H.S. Kang Effects of site-directed mutations on processing and activities of penicillin G acylase from Escherichia coli ATCC 11105 J. Bacteriol. 174 1992 6270 6276
    • (1992) J. Bacteriol. , vol.174 , pp. 6270-6276
    • Choi, K.S.1    Kim, J.A.2    Kang, H.S.3
  • 25
    • 0033042555 scopus 로고    scopus 로고
    • Stability and folding of domain proteins
    • R. Jaenicke Stability and folding of domain proteins Prog. Biophys. Mol. Biol. 71 1999 155 241
    • (1999) Prog. Biophys. Mol. Biol. , vol.71 , pp. 155-241
    • Jaenicke, R.1
  • 26
    • 0030010408 scopus 로고    scopus 로고
    • Intermediate states in protein folding
    • P.L. Privalov Intermediate states in protein folding J. Mol. Biol. 258 1996 707 725
    • (1996) J. Mol. Biol. , vol.258 , pp. 707-725
    • Privalov, P.L.1
  • 27
    • 0025180221 scopus 로고
    • The folding and solution conformation of penicillin G acylase
    • C.D. Lindsay, and R.H. Pain The folding and solution conformation of penicillin G acylase Eur. J. Biochem. 192 1990 133 141
    • (1990) Eur. J. Biochem. , vol.192 , pp. 133-141
    • Lindsay, C.D.1    Pain, R.H.2
  • 28
    • 0033544965 scopus 로고    scopus 로고
    • Involvement of cysteine residues and domain interactions in the reversible unfolding of lipoxygenase-1
    • E. Sudharshan, and A.G. Appu Rao Involvement of cysteine residues and domain interactions in the reversible unfolding of lipoxygenase-1 J. Biol. Chem. 274 1999 35351 35358
    • (1999) J. Biol. Chem. , vol.274 , pp. 35351-35358
    • Sudharshan, E.1    Appu Rao, A.G.2
  • 33
    • 0034581327 scopus 로고    scopus 로고
    • Role of the molten globule state in protein folding
    • M. Arai, and K. Kuwajima Role of the molten globule state in protein folding Advan. Protein Chem. 53 2000 209 282
    • (2000) Advan. Protein Chem. , vol.53 , pp. 209-282
    • Arai, M.1    Kuwajima, K.2
  • 35
    • 0037315336 scopus 로고    scopus 로고
    • Improvement of posttranslational bottlenecks in the production of penicillin amidase in recombinant Escherichia coli strains
    • Z. Ignatova, A. Mahsunah, M. Georgieva, and V. Kasche Improvement of posttranslational bottlenecks in the production of penicillin amidase in recombinant Escherichia coli strains Appl. Environ. Microbiol. 69 2003 1237 1245
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1237-1245
    • Ignatova, Z.1    Mahsunah, A.2    Georgieva, M.3    Kasche, V.4
  • 36
    • 0023053396 scopus 로고
    • Effects of the phenylalanine-22 leucine, glutamic acid-49 methionine, glycine-234 aspartic acid, and glycine-234 lysine mutations on the folding and protein stability of the α-subunit of tryptophan synthase from Escherichia coli
    • A.M. Beasty, M.R. Hurle, J.T. Manz, T. Stackhouse, J.J. Onuffer, and C.R. Matthews Effects of the phenylalanine-22 leucine, glutamic acid-49 methionine, glycine-234 aspartic acid, and glycine-234 lysine mutations on the folding and protein stability of the α-subunit of tryptophan synthase from Escherichia coli Biochemistry 25 1986 2965 2974
    • (1986) Biochemistry , vol.25 , pp. 2965-2974
    • Beasty, A.M.1    Hurle, M.R.2    Manz, J.T.3    Stackhouse, T.4    Onuffer, J.J.5    Matthews, C.R.6
  • 37
    • 0019883139 scopus 로고
    • Urea-induced unfolding of the α-subunit of tryptophan synthase: Evidence for a multistep process
    • C.R. Matthews, and M.M. Crisanti Urea-induced unfolding of the α-subunit of tryptophan synthase: evidence for a multistep process Biochemistry 20 1981 784 792
    • (1981) Biochemistry , vol.20 , pp. 784-792
    • Matthews, C.R.1    Crisanti, M.M.2
  • 38
    • 0023697408 scopus 로고
    • Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulphonyl a-chymotrypsin using different denaturants
    • M.M. Santoro, and D.W. Bolen Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulphonyl a-chymotrypsin using different denaturants Biochemistry 27 1988 8063 8068
    • (1988) Biochemistry , vol.27 , pp. 8063-8068
    • Santoro, M.M.1    Bolen, D.W.2
  • 39
    • 0022540161 scopus 로고
    • A silver stain for rapid quantitative detection of proteins or nucleic acids on membranes or thin layer plates
    • C.R. Merril, and M.E. Pratt A silver stain for rapid quantitative detection of proteins or nucleic acids on membranes or thin layer plates Anal. Biochem. 156 1986 96 110
    • (1986) Anal. Biochem. , vol.156 , pp. 96-110
    • Merril, C.R.1    Pratt, M.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.