-
1
-
-
0031879114
-
Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells
-
ARKIN, A. P., J. ROSS and H. H. MCADAMS, 1998 Stochastic kinetic analysis of developmental pathway bifurcation in phage λ-infected Escherichia coli cells. Genetics 149: 1633-1648.
-
(1998)
Genetics
, vol.149
, pp. 1633-1648
-
-
Arkin, A.P.1
Ross, J.2
McAdams, H.H.3
-
2
-
-
0038241770
-
Development of a genetic circuitry exhibiting toggle switch or oscillatory behavior in Eschenchia coli
-
ATKINSON, M. R., M. A. SAVAGEAU, J. T. MYERS and A. J. NINFA, 2003 Development of a genetic circuitry exhibiting toggle switch or oscillatory behavior in Eschenchia coli. Cell 13: 597-607.
-
(2003)
Cell
, vol.13
, pp. 597-607
-
-
Atkinson, M.R.1
Savageau, M.A.2
Myers, J.T.3
Ninfa, A.J.4
-
3
-
-
0032006153
-
Instruments of microbial warefare: Bacteriocin synthesis, toxicity, and immunity
-
BABA, T., and O. SCHNEEWIND, 1998 Instruments of microbial warefare: bacteriocin synthesis, toxicity, and immunity. Trends Micro biol. 6: 66-71.
-
(1998)
Trends Micro Biol.
, vol.6
, pp. 66-71
-
-
Baba, T.1
Schneewind, O.2
-
4
-
-
0027469448
-
SinI modulates the activity of SinR, a developmental switch protein by protein-protein interaction
-
BAI, U., I. MANDIC-MULEC and I. SMITH, 1993 SinI modulates the activity of SinR, a developmental switch protein by protein-protein interaction. Genes Dev. 7: 139-148.
-
(1993)
Genes Dev.
, vol.7
, pp. 139-148
-
-
Bai, U.1
Mandic-Mulec, I.2
Smith, I.3
-
5
-
-
17144456808
-
Positive feedback in eukaryotic gene networks: Cell differentiation by graded to binary response conversion
-
BECSKEI, A., B. SERAPHIN and L. SERRANO, 2001 Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion. EMBO J. 20: 2528-2535.
-
(2001)
EMBO J.
, vol.20
, pp. 2528-2535
-
-
Becskei, A.1
Seraphin, B.2
Serrano, L.3
-
6
-
-
0035875668
-
Cell signaling can direct either binary or graded transcriptional responses
-
BIGGAR, S. R., and G. R. CRABTREE, 2001 Cell signaling can direct either binary or graded transcriptional responses. EMBO J. 20: 3167-3176.
-
(2001)
EMBO J.
, vol.20
, pp. 3167-3176
-
-
Biggar, S.R.1
Crabtree, G.R.2
-
7
-
-
0030009319
-
The Bacillus subtilis response regulator Spo0A stimulates transcription of the spoIIG operon through modification of the RNA polymerase promoter complexes
-
BIRD, T. H., J. K. GRIMSLEY, J. A. HOCH and G. B. SPIEGELMAN, 1996 The Bacillus subtilis response regulator Spo0A stimulates transcription of the spoIIG operon through modification of the RNA polymerase promoter complexes. J. Mol. Biol. 256: 436-448.
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 436-448
-
-
Bird, T.H.1
Grimsley, J.K.2
Hoch, J.A.3
Spiegelman, G.B.4
-
8
-
-
0025317560
-
The lethal λSgene encodes its own inhibitor
-
BLÄSI, U., C.-Y. CHANG, M. T. ZAGOTTA, K. NAM and R. YOUNG, 1990 The lethal λSgene encodes its own inhibitor. EMBOJ. 3: 981-989.
-
(1990)
EMBOJ.
, vol.3
, pp. 981-989
-
-
Bläsi, U.1
Chang, C.-Y.2
Zagotta, M.T.3
Nam, K.4
Young, R.5
-
9
-
-
0030671325
-
SigX of Bacillus subtilis replaces the ECF sigma factor FecI of Escherichia coli and is inhibited by RsiX
-
BRUTSCHE, S., and V. BRAUN, 1997 SigX of Bacillus subtilis replaces the ECF sigma factor FecI of Escherichia coli and is inhibited by RsiX. Mol. Gen. Genet. 256: 416-425.
-
(1997)
Mol. Gen. Genet.
, vol.256
, pp. 416-425
-
-
Brutsche, S.1
Braun, V.2
-
10
-
-
0033605316
-
Effect of mutations in the "extended-10" motif of three Bacillus subtilis sigmA-RNA polymerase-dependent promoters
-
CAMACHO, A., and M. SALAS, 1999 Effect of mutations in the "extended-10" motif of three Bacillus subtilis sigmA-RNA polymerase-dependent promoters. J. Mol. Biol. 286: 683-693.
-
(1999)
J. Mol. Biol.
, vol.286
, pp. 683-693
-
-
Camacho, A.1
Salas, M.2
-
11
-
-
0034049350
-
Kinetics of desolvation- Mediated protein-protein binding
-
CAMACHO, C. J., S. R. KIMURA, C. DELISI and S. VAJDA, 2000 Kinetics of desolvation- mediated protein-protein binding. Biophys. J. 78: 1094-1105.
-
(2000)
Biophys. J.
, vol.78
, pp. 1094-1105
-
-
Camacho, C.J.1
Kimura, S.R.2
DeLisi, C.3
Vajda, S.4
-
12
-
-
0032529502
-
The Bacillus subtilis regulator SinR inhibits spoIIG promoter transcription in vitro without displacing RNA polymerase
-
CERVIN, M. A., R. J. LEWIS, J. A. BRANNIGAN and G. B. SPIEGELMAN, 1998 The Bacillus subtilis regulator SinR inhibits spoIIG promoter transcription in vitro without displacing RNA polymerase. Nucleic Acids Res. 26: 3806-3812.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3806-3812
-
-
Cervin, M.A.1
Lewis, R.J.2
Brannigan, J.A.3
Spiegelman, G.B.4
-
13
-
-
0028281189
-
Gene expression in single cells of Bacillus subtilis: Evidence that a threshold mechanism controls initiation of sporulation
-
CHUNG, J. D., G. STEPHANOPOULOS, K. IRETON and A. D. GROSSMAN, 1994 Gene expression in single cells of Bacillus subtilis: evidence that a threshold mechanism controls initiation of sporulation. J. Bacteriol. 176: 1977-1984.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 1977-1984
-
-
Chung, J.D.1
Stephanopoulos, G.2
Ireton, K.3
Grossman, A.D.4
-
14
-
-
0014847526
-
Sporulation of Bacillus subtilis in continuous culture
-
DAWES, I. W., and J. MANDELSTAM, 1970 Sporulation of Bacillus subtilis in continuous culture. J. Bacteriol. 103: 529-535.
-
(1970)
J. Bacteriol.
, vol.103
, pp. 529-535
-
-
Dawes, I.W.1
Mandelstam, J.2
-
15
-
-
1242345225
-
Qualitative simulation of initiation of sporulation in Bacillus subtilis
-
DE JONG, H., J. GEISELMANN, G. BATT, C. HERNANDEZ and M. PAGE, 2004 Qualitative simulation of initiation of sporulation in Bacillus subtilis. Bull. Math. Biol. 66: 261-299.
-
(2004)
Bull. Math. Biol.
, vol.66
, pp. 261-299
-
-
De Jong, H.1
Geiselmann, J.2
Batt, G.3
Hernandez, C.4
Page, M.5
-
16
-
-
0001755071
-
AUTO, a program for the automatic bifurcation analysis of autonomous systems
-
DOEDEL, E. J., 1981 AUTO, a program for the automatic bifurcation analysis of autonomous systems. Congr. Numer. 30: 265-384.
-
(1981)
Congr. Numer.
, vol.30
, pp. 265-384
-
-
Doedel, E.J.1
-
17
-
-
0032696759
-
Addiction modules and programmed cell death and antideath in bacterial cultures
-
ENGELBERG-KULKA, H., and G. GLASER, 1999 Addiction modules and programmed cell death and antideath in bacterial cultures. Annu. Rev. Microbiol. 53: 43-70.
-
(1999)
Annu. Rev. Microbiol.
, vol.53
, pp. 43-70
-
-
Engelberg-Kulka, H.1
Glaser, G.2
-
19
-
-
0031721651
-
Effect of temperature on in vivo protein synthetic capacity in Escherichia coli
-
FAREWELL, A., and F. C. NEIDHARDT, 1998 Effect of temperature on in vivo protein synthetic capacity in Escherichia coli. J. Bacteriol. 180: 4704-4710.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4704-4710
-
-
Farewell, A.1
Neidhardt, F.C.2
-
20
-
-
0032566306
-
Equilibrium and kinetic parameters of the sequence-specific interaction of Escherichia coli RNA polymerase with nontemplate strand oligodeoxyribonucleotides
-
FEDORIW, A. M., H. Y. LIU, V. E. ANDERSON and P. L. DEHASETH, 1998 Equilibrium and kinetic parameters of the sequence-specific interaction of Escherichia coli RNA polymerase with nontemplate strand oligodeoxyribonucleotides. Biochemistry 37: 11971-11979.
-
(1998)
Biochemistry
, vol.37
, pp. 11971-11979
-
-
Fedoriw, A.M.1
Liu, H.Y.2
Anderson, V.E.3
DeHaseth, P.L.4
-
21
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
GARDNER, T. S., C. R. CANTOR and J. J. COLLINS, 2000 Construction of a genetic toggle switch in Escherichia coli. Nature 403: 339-342.
-
(2000)
Nature
, vol.403
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
22
-
-
0023022816
-
Characterization of a cloned Bacillus subtilis gene that inhibits sporulation in multiple copies
-
GAUR, N. K., E. DUBNAU and I. SMITH, 1986 Characterization of a cloned Bacillus subtilis gene that inhibits sporulation in multiple copies. J. Bacteriol. 168: 860-869.
-
(1986)
J. Bacteriol.
, vol.168
, pp. 860-869
-
-
Gaur, N.K.1
Dubnau, E.2
Smith, I.3
-
23
-
-
0023973186
-
Structure and expression of the Bacillus subtilis sin operon
-
GAUR, N. K., K. CABANE and I. SMITH, 1988 Structure and expression of the Bacillus subtilis sin operon. J. Bacteriol. 170: 1046-1053.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 1046-1053
-
-
Gaur, N.K.1
Cabane, K.2
Smith, I.3
-
24
-
-
0026074372
-
The Bacillus subtilis sin gene, a regulator of alternate developmental processes, codes for a DNA-binding protein
-
GAUR, N. K., J. OPPENHEIM and I. SMITH, 1991 The Bacillus subtilis sin gene, a regulator of alternate developmental processes, codes for a DNA-binding protein. J. Bacteriol. 173: 678-686.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 678-686
-
-
Gaur, N.K.1
Oppenheim, J.2
Smith, I.3
-
25
-
-
33645429016
-
Exact stochastic simulations of coupled chemical reactions
-
GILLESPIE, D. T., 1977 Exact stochastic simulations of coupled chemical reactions. J. Phys. Chem. 81: 2340-2361.
-
(1977)
J. Phys. Chem.
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.T.1
-
26
-
-
0029565061
-
Genetic networks controlling the initiation of sporulation and the development of competence in Bacillus subtilis
-
GROSSMAN, A. D., 1995 Genetic networks controlling the initiation of sporulation and the development of competence in Bacillus subtilis. Annu. Rev. Genet. 29: 477-508.
-
(1995)
Annu. Rev. Genet.
, vol.29
, pp. 477-508
-
-
Grossman, A.D.1
-
27
-
-
0037165942
-
Combinatorial synthesis of genetic networks
-
GUET, C. C., M. B. ELOWITZ, W. H. HSING and S. LEIBLER, 2002 Combinatorial synthesis of genetic networks. Science 296: 1466-1470.
-
(2002)
Science
, vol.296
, pp. 1466-1470
-
-
Guet, C.C.1
Elowitz, M.B.2
Hsing, W.H.3
Leibler, S.4
-
28
-
-
0031553215
-
Bistability without hysteresis in chemical reaction systems: A theoretical analysis of irreversible transitions between multiple steady states
-
GUIDI, G. M., and A. GOLDBETER, 1997 Bistability without hysteresis in chemical reaction systems: a theoretical analysis of irreversible transitions between multiple steady states. J. Phys. Chem. A 101: 9367-9376.
-
(1997)
J. Phys. Chem. A
, vol.101
, pp. 9367-9376
-
-
Guidi, G.M.1
Goldbeter, A.2
-
29
-
-
0033992294
-
Oscillations and bistability predicted by a model for a cyclical bienzymatic system involving the regulated isocitrate dehydrogenase reaction
-
GUIDI, G. M., and A. GOLDBETER, 2000 Oscillations and bistability predicted by a model for a cyclical bienzymatic system involving the regulated isocitrate dehydrogenase reaction. Biophys. Chem. 83: 153-170.
-
(2000)
Biophys. Chem.
, vol.83
, pp. 153-170
-
-
Guidi, G.M.1
Goldbeter, A.2
-
30
-
-
0029790351
-
Ultrasensitivity in the mitogen-activated protein kinase cascade
-
HUANG, C.-Y., and J. E. FERRELL, JR., 1996 Ultrasensitivity in the mitogen-activated protein kinase cascade. Proc. Natl. Acad. Sci. USA 93: 10078-10083.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 10078-10083
-
-
Huang, C.-Y.1
Ferrell Jr., J.E.2
-
32
-
-
0030030533
-
Smoothness within ruggedness: The role of neutrality in adaptation
-
HUYNEN, M. A., P. F. STADLER and W. FONTANA, 1996 Smoothness within ruggedness: the role of neutrality in adaptation. Proc. Natl. Acad. Sci. USA 93: 397-401.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 397-401
-
-
Huynen, M.A.1
Stadler, P.F.2
Fontana, W.3
-
33
-
-
0027476641
-
Integration of multiple developmental signals in Bacillus subtilis through the Spo0A transcription factor
-
IRETON, K., D. Z. RUDNER, K. J. SIRANOSIAN and A. J. GROSSMAN, 1993 Integration of multiple developmental signals in Bacillus subtilis through the Spo0A transcription factor. Genes Dev. 7: 283-294.
-
(1993)
Genes Dev.
, vol.7
, pp. 283-294
-
-
Ireton, K.1
Rudner, D.Z.2
Siranosian, K.J.3
Grossman, A.J.4
-
34
-
-
0038752612
-
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
-
IVANOVA, N., A. SOROKIN, I. ANDERSON, N. GALLERON, B. CANDELON et al., 2003 Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature 423: 87-91.
-
(2003)
Nature
, vol.423
, pp. 87-91
-
-
Ivanova, N.1
Sorokin, A.2
Anderson, I.3
Galleron, N.4
Candelon, B.5
-
36
-
-
0000410374
-
Thermodynamics of the DNA binding reaction of transcription factor MASH-1
-
KUNNE, A. G. E., M. SIEBER, D. MEIERHANS and R. K. ALLEMANN, 1998 Thermodynamics of the DNA binding reaction of transcription factor MASH-1. Biochemistry 37: 4217-4223.
-
(1998)
Biochemistry
, vol.37
, pp. 4217-4223
-
-
Kunne, A.G.E.1
Sieber, M.2
Meierhans, D.3
Allemann, R.K.4
-
37
-
-
0030809629
-
Selfish operons and speciation by gene transfer
-
LAWRENCE, J. G., 1997 Selfish operons and speciation by gene transfer. Trends Microbiol. 5: 355-359.
-
(1997)
Trends Microbiol.
, vol.5
, pp. 355-359
-
-
Lawrence, J.G.1
-
38
-
-
0032514949
-
An evolutionary link between sporulation and pro phage induction in the structure of a repressor:anti-repressor complex
-
LEWIS, R. J., J. A. BRANNIGAN, W. A. OFFEN, I. SMITH and A. J. WILKINSON, 1998 An evolutionary link between sporulation and pro phage induction in the structure of a repressor:anti-repressor complex. J. Mol. Biol. 283: 907-912.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 907-912
-
-
Lewis, R.J.1
Brannigan, J.A.2
Offen, W.A.3
Smith, I.4
Wilkinson, A.J.5
-
39
-
-
0036290382
-
Dimer formation and transcription activation in the sporulation response regulator Spo0A
-
LEWIS, R. J., D. J. SCOTT, J. A. BRANNIGAN, J. C. LADDS, M. A. CERVIN et al., 2002 Dimer formation and transcription activation in the sporulation response regulator Spo0A. J. Mol. Biol. 316: 235-245.
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 235-245
-
-
Lewis, R.J.1
Scott, D.J.2
Brannigan, J.A.3
Ladds, J.C.4
Cervin, M.A.5
-
40
-
-
0033517148
-
Robustness of a gene regulatory circuit
-
LITTLE, J. W., D. P. SHEPLEY and D. W. WERT, 1999 Robustness of a gene regulatory circuit. EMBO J. 18: 4299-4307.
-
(1999)
EMBO J.
, vol.18
, pp. 4299-4307
-
-
Little, J.W.1
Shepley, D.P.2
Wert, D.W.3
-
41
-
-
0035313205
-
How Bacillus thuringiensis has evolved specific toxins to colonize the insect world
-
MAAGD, R. A., A. BRAVO and N. CRICKMORE, 2001 How Bacillus thuringiensis has evolved specific toxins to colonize the insect world. Trends Genet. 17: 193-199.
-
(2001)
Trends Genet.
, vol.17
, pp. 193-199
-
-
Maagd, R.A.1
Bravo, A.2
Crickmore, N.3
-
42
-
-
1642269636
-
Stochastic processes influence stationary-phase decisions in Bacillus subtilis
-
MAUGHAN, H., and W. L. NICHOLSON, 2004 Stochastic processes influence stationary-phase decisions in Bacillus subtilis. J. Bacteriol. 186: 2212-2214.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 2212-2214
-
-
Maughan, H.1
Nicholson, W.L.2
-
43
-
-
0026691417
-
Sin, a stage-specific repressor of cellular differentiation
-
MANDIC-MULEC, I., N. GAUR, U. BAI and I. SMITH, 1992 sin, a stage-specific repressor of cellular differentiation. J. Bacteriol. 174: 3561-3569.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 3561-3569
-
-
Mandic-Mulec, I.1
Gaur, N.2
Bai, U.3
Smith, I.4
-
44
-
-
0029083725
-
The Bacillus subtilis SinR protein is a repressor of the key sporulation gene spo0A
-
MANDIC-MULEC, I., L. DOUKHAN and I. SMITH, 1995 The Bacillus subtilis SinR protein is a repressor of the key sporulation gene spo0A. J. Bacteriol. 177: 4619-4627.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4619-4627
-
-
Mandic-Mulec, I.1
Doukhan, L.2
Smith, I.3
-
45
-
-
0033083733
-
It's a noisy business! Genetic regulation at the nanomolar scale
-
MCADAMS, H.H., and A. P. ARKIN, 1999 It's a noisy business! Genetic regulation at the nanomolar scale. Trends Genet. 15: 65-69.
-
(1999)
Trends Genet.
, vol.15
, pp. 65-69
-
-
McAdams, H.H.1
Arkin, A.P.2
-
46
-
-
1842383693
-
Rate-limiting steps in RNA chain elongation
-
MCCLURE, W. R., 1980 Rate-limiting steps in RNA chain elongation. Proc. Natl. Acad. Sci. USA 77: 5634-5638.
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 5634-5638
-
-
McClure, W.R.1
-
47
-
-
0002693967
-
A biochemical analysis of the effect of RNA polvmerase concentration on the in vivo control of RNA chain initiation frequency
-
edited by D. LENON, F. STRATMAN and R. ZAHLMAN. Elsevier Scientific, New York
-
MCCLURE, W. R., 1983 A biochemical analysis of the effect of RNA polvmerase concentration on the in vivo control of RNA chain initiation frequency, pp. 207-217 in Biochemistry of Metabolic Processes: Proceedings of the 12th Steenbock Symposium, edited by D. LENON, F. STRATMAN and R. ZAHLMAN. Elsevier Scientific, New York.
-
(1983)
Biochemistry of Metabolic Processes: Proceedings of the 12th Steenbock Symposium
, pp. 207-217
-
-
McClure, W.R.1
-
48
-
-
0037076210
-
Robustness, flexibility, and the role of lateral inhibition in the neurogenic network
-
MEIR, E., G. VON DASSOW, E. MUNRO and G. M. O'DELL, 2002 Robustness, flexibility, and the role of lateral inhibition in the neurogenic network. Curr. Biol. 12: 778-785.
-
(2002)
Curr. Biol.
, vol.12
, pp. 778-785
-
-
Meir, E.1
Von Dassow, G.2
Munro, E.3
O'Dell, G.M.4
-
49
-
-
0036888857
-
Fighting change with change: Adaptive variation in an uncertain world
-
MEYERS, L. A., and J. J. BULL, 2002 Fighting change with change: adaptive variation in an uncertain world. Trends Ecol. Evol. 17: 551-557.
-
(2002)
Trends Ecol. Evol.
, vol.17
, pp. 551-557
-
-
Meyers, L.A.1
Bull, J.J.2
-
50
-
-
0029985298
-
Evolution of the genetic switch in temperate bacteriophage. I. Basic theory
-
MITTLER, J., 1996 Evolution of the genetic switch in temperate bacteriophage. I. Basic theory. J. Theor. Biol. 179: 161-172.
-
(1996)
J. Theor. Biol.
, vol.179
, pp. 161-172
-
-
Mittler, J.1
-
51
-
-
0033135671
-
When the going gets tough: Survival strategies and environmental signaling networks in Bacillus subtilis
-
MSADEK, T., 1999 When the going gets tough: survival strategies and environmental signaling networks in Bacillus subtilis. Trends Microbiol. 7: 201-207.
-
(1999)
Trends Microbiol.
, vol.7
, pp. 201-207
-
-
Msadek, T.1
-
52
-
-
0009703973
-
Bifurcation analysis of chemical reaction mechanisms. II. Hopf bifurcation analysis
-
OLSEN, R.J., and I. R. EPSTEIN, 1993 Bifurcation analysis of chemical reaction mechanisms. II. Hopf bifurcation analysis. J. Chem. Phys. 98: 2805-2822.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 2805-2822
-
-
Olsen, R.J.1
Epstein, I.R.2
-
53
-
-
1442354192
-
Multistability in the lactose utilization network of Escherichia coli
-
OZBUDAK, E. M., M. THATTAI, H. N. LIM, B. I. SHRAIMAN and A. VAN OUDENAARDEN, 2004 Multistability in the lactose utilization network of Escherichia coli. Nature 427: 737-740.
-
(2004)
Nature
, vol.427
, pp. 737-740
-
-
Ozbudak, E.M.1
Thattai, M.2
Lim, H.N.3
Shraiman, B.I.4
Van Oudenaarden, A.5
-
54
-
-
0030844587
-
A peptide export-import control circuit modulating bacterial development regulates protein phosphatases of the phosphorelay
-
PEREGO, M., 1997 A peptide export-import control circuit modulating bacterial development regulates protein phosphatases of the phosphorelay. Proc. Natl. Acad. Sci. USA 94: 8612-8617.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 8612-8617
-
-
Perego, M.1
-
55
-
-
0002759527
-
General stress response
-
edited by A. L. SONENSHEIN, J. A. HOCH and R. LOSICK. ASM Press, Washington, DC
-
PRICE, C. W., 2002 General stress response, pp. 369-384 in Bacillus subtilis and Its Closest Relatives: From Genes to Cells, edited by A. L. SONENSHEIN, J. A. HOCH and R. LOSICK. ASM Press, Washington, DC.
-
(2002)
Bacillus Subtilis and Its Closest Relatives: From Genes to Cells
, pp. 369-384
-
-
Price, C.W.1
-
56
-
-
0034120118
-
Control of sporulation gene expression in Bacillus subtilis by the chromosome partitioning proteins Soj (ParA) and Spo0J (ParB)
-
QUISEL, J. D., and A. D. GROSSMAN, 2000 Control of sporulation gene expression in Bacillus subtilis by the chromosome partitioning proteins Soj (ParA) and Spo0J (ParB). J. Bacteriol. 182: 3446-3451.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 3446-3451
-
-
Quisel, J.D.1
Grossman, A.D.2
-
57
-
-
0037078982
-
Control, exploitation and tolerance of intracellular noise
-
RAO, C. V., D. M. WOLF and A. P. ARKIN, 2003 Control, exploitation and tolerance of intracellular noise. Nature 420: 231-237.
-
(2003)
Nature
, vol.420
, pp. 231-237
-
-
Rao, C.V.1
Wolf, D.M.2
Arkin, A.P.3
-
58
-
-
0037077108
-
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis
-
READ, T. D., S. L. SALZBERG, M. POP, M. SHUMWAY, L. UMAYAM et al., 2002 Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis. Science 296: 2028-2033.
-
(2002)
Science
, vol.296
, pp. 2028-2033
-
-
Read, T.D.1
Salzberg, S.L.2
Pop, M.3
Shumway, M.4
Umayam, L.5
-
59
-
-
0038752613
-
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
-
READ, T. D., S. N. PETERSON, N. TOURASSE, L. W. BAILLIE, I. T. PAULSEN et al., 2003 The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria. Nature 423: 81-86.
-
(2003)
Nature
, vol.423
, pp. 81-86
-
-
Read, T.D.1
Peterson, S.N.2
Tourasse, N.3
Baillie, L.W.4
Paulsen, I.T.5
-
60
-
-
0033638332
-
Transcriptional control: Rheostat converted to on/off switch
-
ROSSI, F. M. V., A. M. KRINGSTEIN, A. SPICHER, O. M. GUICHERIT and H. M. BLAU, 2000 Transcriptional control: rheostat converted to on/off switch. Mol. Cell 6: 723-728.
-
(2000)
Mol. Cell
, vol.6
, pp. 723-728
-
-
Rossi, F.M.V.1
Kringstein, A.M.2
Spicher, A.3
Guicherit, O.M.4
Blau, H.M.5
-
61
-
-
0032574774
-
DNA strand separation during activation of a developmental promoter by Bacillus subtilis response regulator Spo0A
-
ROWE-MAGNUS, D. A., and G. B. SPIEGELMAN, 1998 DNA strand separation during activation of a developmental promoter by Bacillus subtilis response regulator Spo0A. Proc. Natl. Acad. Sci. USA 95: 5305-5310.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 5305-5310
-
-
Rowe-Magnus, D.A.1
Spiegelman, G.B.2
-
62
-
-
0032569851
-
Hsp90 as a capacitor for morphological evolution
-
RUTHERFORD, S. L., and S. LINDQUIST, 1998 Hsp90 as a capacitor for morphological evolution. Nature 396: 338-342.
-
(1998)
Nature
, vol.396
, pp. 338-342
-
-
Rutherford, S.L.1
Lindquist, S.2
-
63
-
-
0031904590
-
Demand theory of gene regulation I: Quantitative development of the theory
-
SAVAGEAU, M. A., 1998 Demand theory of gene regulation I: quantitative development of the theory. Genetics 149: 1665-1676.
-
(1998)
Genetics
, vol.149
, pp. 1665-1676
-
-
Savageau, M.A.1
-
65
-
-
0033550202
-
Quaternary re-arrangement analyzed by spectral enhancement: The interaction of a sporulation repressor with its antagonist
-
SCOTT, D. J., S. LEEJEERAJUMNEAN, J. A. BRANNIGAN, R. J. LEWIS, A. J. WILKINSON et al., 1999 Quaternary re-arrangement analyzed by spectral enhancement: the interaction of a sporulation repressor with its antagonist. J. Mol. Biol. 293: 997-1004.
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 997-1004
-
-
Scott, D.J.1
Leejeerajumnean, S.2
Brannigan, J.A.3
Lewis, R.J.4
Wilkinson, A.J.5
-
66
-
-
0038610819
-
Detailed map of a cis-regulatory input function
-
SETTY, Y., E. A. MAYO, M. G. SURETTE and U. ALON, 2003 Detailed map of a cis-regulatory input function. Proc. Natl. Acad. Sci. USA 100: 7702-7707.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7702-7707
-
-
Setty, Y.1
Mayo, E.A.2
Surette, M.G.3
Alon, U.4
-
67
-
-
0036135689
-
Postexponential regulation of sin operon expression in Bacillus subtilis
-
SHAFIKHANI, S. H., I. MANDIC-MULEC, M. A. STRAUCH, I. SMITH and T. LEIGHTON, 2002 Postexponential regulation of sin operon expression in Bacillus subtilis. J. Bacteriol. 184: 564-571.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 564-571
-
-
Shafikhani, S.H.1
Mandic-Mulec, I.2
Strauch, M.A.3
Smith, I.4
Leighton, T.5
-
68
-
-
0022429106
-
R control system of bacteriophage lambda: A physical-chemical model for gene regulation
-
R control system of bacteriophage lambda: a physical-chemical model for gene regulation. J. Mol. Biol. 181: 211-230.
-
(1985)
J. Mol. Biol.
, vol.181
, pp. 211-230
-
-
Shea, M.A.1
Ackers, G.K.2
-
69
-
-
0036578795
-
Network motifs in the transcriptional regulation network of Escherichia coli
-
SHEN-ORR, S. S., R. MILO, S. MANGAN and U. ALON, 2002 Network motifs in the transcriptional regulation network of Escherichia coli. Nat. Genet. 31: 64-68.
-
(2002)
Nat. Genet.
, vol.31
, pp. 64-68
-
-
Shen-Orr, S.S.1
Milo, R.2
Mangan, S.3
Alon, U.4
-
70
-
-
0002625568
-
Regulatory proteins that control late-growth development
-
edited by A. L. SONENSHEIN, J. A. HOCH and R. LOSICK. American Society for Microbiology, Washington, DC
-
SMITH, I., 1993 Regulatory proteins that control late-growth development, pp. 785-800 in Bacillus subtilis and Other Gram-Positive Bacteria, edited by A. L. SONENSHEIN, J. A. HOCH and R. LOSICK. American Society for Microbiology, Washington, DC.
-
(1993)
Bacillus Subtilis and Other Gram-Positive Bacteria
, pp. 785-800
-
-
Smith, I.1
-
71
-
-
0026315987
-
The role of negative control in sporulation
-
SMITH, I., I. MANDIC-MULEC and N. GAUR, 1991 The role of negative control in sporulation. Res. Microbiol. 142: 831-839.
-
(1991)
Res. Microbiol.
, vol.142
, pp. 831-839
-
-
Smith, I.1
Mandic-Mulec, I.2
Gaur, N.3
-
72
-
-
0036427575
-
Evolution of signaling in the sporulation pathway
-
STEPHENSON, K., and J. A. HOCH, 2002 Evolution of signaling in the sporulation pathway. Mol. Microbiol. 2: 297-304.
-
(2002)
Mol. Microbiol.
, vol.2
, pp. 297-304
-
-
Stephenson, K.1
Hoch, J.A.2
-
73
-
-
0042060954
-
Molecular analysis of Phr peptide processing in Bacillus subtilis
-
STEPHENSON, S., C. MUELLER, M. JIANG and M. PEREGO, 2003 Molecular analysis of Phr peptide processing in Bacillus subtilis. J. Bacteriol. 185: 4861-4871.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4861-4871
-
-
Stephenson, S.1
Mueller, C.2
Jiang, M.3
Perego, M.4
-
74
-
-
0030457111
-
Molecular genetics of sporulation in Bacillus subtilis
-
STRAGIER, P., and R. LOSICK, 1996 Molecular genetics of sporulation in Bacillus subtilis. Annu. Rev. Genet. 30: 297-341.
-
(1996)
Annu. Rev. Genet.
, vol.30
, pp. 297-341
-
-
Stragier, P.1
Losick, R.2
-
75
-
-
0024401302
-
The transition state transcription regulation abrB of Bacillus subtilis is a DNA binding protein
-
STRAUCH, M. A., G. B. SPIEGELMAN, M. PEREGO, W. C. JOHNSON, D. BURBULYS et al., 1989 The transition state transcription regulation abrB of Bacillus subtilis is a DNA binding protein. EMBO J. 8: 1615-1621.
-
(1989)
EMBO J.
, vol.8
, pp. 1615-1621
-
-
Strauch, M.A.1
Spiegelman, G.B.2
Perego, M.3
Johnson, W.C.4
Burbulys, D.5
-
76
-
-
0034327380
-
Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis
-
TAKAMI, H., K. NAKASONE, Y. TAKAKI, G. MAENO, R. SASAKI et al., 2000 Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. Nucleic Acids Res. 28: 4317-4331.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4317-4331
-
-
Takami, H.1
Nakasone, K.2
Takaki, Y.3
Maeno, G.4
Sasaki, R.5
-
77
-
-
0032964297
-
Blast 2 sequences - A new tool for comparing protein and nucleotide sequences
-
TATIANA, A., T. A. TATUSOVA and T. L. MADDEN, 1999 Blast 2 sequences - a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174: 247-250.
-
(1999)
FEMS Microbiol. Lett.
, vol.174
, pp. 247-250
-
-
Tatiana, A.1
Tatusova, T.A.2
Madden, T.L.3
-
78
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
-
THOMPSON, J. D., D. G. HIGGINS and T. J. GIBSON, 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
79
-
-
0037197850
-
Mechanisms of noise-resistance in genetic oscillators
-
VILAR, J. G. M., H. Y. KUEH, N. BARKAI and S. LEIBLER, 2002 Mechanisms of noise-resistance in genetic oscillators. Proc. Natl. Acad. Sci. USA 99: 5988-5992.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5988-5992
-
-
Vilar, J.G.M.1
Kueh, H.Y.2
Barkai, N.3
Leibler, S.4
-
80
-
-
0344953582
-
In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 3. Influences of individual DNA elements within the promoter recognition region on abortive initiation and promoter escape
-
VO, N. V., L. M. HSU, C. M. KANE and M. J. CHAMBERLIN, 2003 In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 3. Influences of individual DNA elements within the promoter recognition region on abortive initiation and promoter escape. Biochemistry 42: 3798-3811.
-
(2003)
Biochemistry
, vol.42
, pp. 3798-3811
-
-
VO, N.V.1
Hsu, L.M.2
Kane, C.M.3
Chamberlin, M.J.4
-
81
-
-
0033770580
-
Rational evolutionary design: The theory of in vitro protein evolution
-
VOIGT, C. A., S. KAUFFMAN and Z.-G. WANG, 2001 Rational evolutionary design: the theory of in vitro protein evolution. Adv. Protein Chem. 55: 79-160.
-
(2001)
Adv. Protein Chem.
, vol.55
, pp. 79-160
-
-
Voigt, C.A.1
Kauffman, S.2
Wang, Z.-G.3
-
82
-
-
0034644270
-
The segment polarity network is a robust developmental module
-
VON DASSOW, G., E. MEIR, E. M. MUNRO and G. M. ODELL, 2000 The segment polarity network is a robust developmental module. Nature 406: 188-192.
-
(2000)
Nature
, vol.406
, pp. 188-192
-
-
Von Dassow, G.1
Meir, E.2
Munro, E.M.3
Odell, G.M.4
-
83
-
-
0037676107
-
Motifs, modules, and games in bacteria
-
WOLF, D. M., and A. P. ARKIN, 2003 Motifs, modules, and games in bacteria. Curr. Opin. Microbiol. 6: 125-134.
-
(2003)
Curr. Opin. Microbiol.
, vol.6
, pp. 125-134
-
-
Wolf, D.M.1
Arkin, A.P.2
|