-
1
-
-
0032502928
-
An integrated approach to proteome analysis: Identification of proteins associated with cardiac hypertrophy
-
D. Arnott, K.L. O'Connell, K.L. King, and J.T. Stults An integrated approach to proteome analysis: identification of proteins associated with cardiac hypertrophy Anal. Biochem. 258 1998 1 18
-
(1998)
Anal. Biochem.
, vol.258
, pp. 1-18
-
-
Arnott, D.1
O'Connell, K.L.2
King, K.L.3
Stults, J.T.4
-
2
-
-
0042861611
-
The role of bioinformatics in two-dimensional gel electrophoresis
-
A.W. Dowsey, M.J. Dunn, and G.Z. Yang The role of bioinformatics in two-dimensional gel electrophoresis Proteomics 3 2003 1567 1596
-
(2003)
Proteomics
, vol.3
, pp. 1567-1596
-
-
Dowsey, A.W.1
Dunn, M.J.2
Yang, G.Z.3
-
3
-
-
14644429693
-
Numerical approaches for quantitative analysis of two-dimensional maps: A review of commercial software and home-made systems
-
E. Marengo, E. Robotti, F. Antonucci, D. Cecconi, N. Campostrini, and P.G. Righetti Numerical approaches for quantitative analysis of two-dimensional maps: A review of commercial software and home-made systems Proteomics 5 2005 654 666
-
(2005)
Proteomics
, vol.5
, pp. 654-666
-
-
Marengo, E.1
Robotti, E.2
Antonucci, F.3
Cecconi, D.4
Campostrini, N.5
Righetti, P.G.6
-
4
-
-
0037390115
-
A novel approach to spot detection for two-dimensional gel electrophoresis images using pixel value collection
-
P. Cutler, G. Heald, I.R. White, and J. Ruan A novel approach to spot detection for two-dimensional gel electrophoresis images using pixel value collection Proteomics 3 2003 392 401
-
(2003)
Proteomics
, vol.3
, pp. 392-401
-
-
Cutler, P.1
Heald, G.2
White, I.R.3
Ruan, J.4
-
5
-
-
11144260096
-
Processing of data generated by 2-dimensional gel electrophoresis for statistical analysis: Missing data, normalization, and statistics
-
J. Chang, H.V. Remmen, W.F. Ward, F.E. Regnier, A. Richardson, and J. Cornell Processing of data generated by 2-dimensional gel electrophoresis for statistical analysis: missing data, normalization, and statistics J. Proteome Res. 3 2004 1210 1218
-
(2004)
J. Proteome Res.
, vol.3
, pp. 1210-1218
-
-
Chang, J.1
Remmen, H.V.2
Ward, W.F.3
Regnier, F.E.4
Richardson, A.5
Cornell, J.6
-
6
-
-
4544270574
-
DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results
-
D.P. Kreil, N.A. Karp, and K.S. Lilley DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results Bioinformatics 20 2004 2026 2034
-
(2004)
Bioinformatics
, vol.20
, pp. 2026-2034
-
-
Kreil, D.P.1
Karp, N.A.2
Lilley, K.S.3
-
7
-
-
0035999977
-
A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments
-
W. Pan A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments Bioinformatics 18 2002 546 554
-
(2002)
Bioinformatics
, vol.18
, pp. 546-554
-
-
Pan, W.1
-
8
-
-
0347724111
-
A generalized likelihood ratio test to identify differentially expressed genes from microarray data
-
S. Wang, and S. Ethier A generalized likelihood ratio test to identify differentially expressed genes from microarray data Bioinformatics 20 2004 100 104
-
(2004)
Bioinformatics
, vol.20
, pp. 100-104
-
-
Wang, S.1
Ethier, S.2
-
9
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
V.G. Tusher, R. Tibshirani, and G. Chu Significance analysis of microarrays applied to the ionizing radiation response Proc. Natl. Acad. Sci. USA 98 2001 5116 5121
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
10
-
-
13844310828
-
Proteomic analysis of bovine skeletal muscle hypertrophy
-
J. Bouley, B. Meunier, C. Chambon, S. De Smet, J.F. Hocquette, and B. Picard Proteomic analysis of bovine skeletal muscle hypertrophy Proteomics 5 2005 490 500
-
(2005)
Proteomics
, vol.5
, pp. 490-500
-
-
Bouley, J.1
Meunier, B.2
Chambon, C.3
De Smet, S.4
Hocquette, J.F.5
Picard, B.6
-
11
-
-
85030804634
-
Differential proteome analysis of aging in rat skeletal muscle
-
(in press)
-
I. Piec, A. Listrat, J. Alliot, C. Chambon, R.G. Taylor, D. Béchet, Differential proteome analysis of aging in rat skeletal muscle, FASEB J. (in press)
-
FASEB J.
-
-
Piec, I.1
Listrat, A.2
Alliot, J.3
Chambon, C.4
Taylor, R.G.5
Béchet, D.6
-
13
-
-
0036898577
-
Microarray data normalization and transformation
-
J. Quackenbush Microarray data normalization and transformation Nat. Genet. 32 2002 496 501
-
(2002)
Nat. Genet.
, vol.32
, pp. 496-501
-
-
Quackenbush, J.1
-
14
-
-
0036376993
-
Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
-
S. Dudoit, Y.H. Yang, T.P. Speed, and M.J. Callow Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments Stat. Sin. 12 2002 111 140
-
(2002)
Stat. Sin.
, vol.12
, pp. 111-140
-
-
Dudoit, S.1
Yang, Y.H.2
Speed, T.P.3
Callow, M.J.4
-
15
-
-
2442453377
-
Determining a significant change in protein expression with DeCyder during a pair-wise comparison using two-dimensional difference gel electrophoresis
-
N.A. Karp, D.P. Kreil, and K.S. Lilley Determining a significant change in protein expression with DeCyder during a pair-wise comparison using two-dimensional difference gel electrophoresis Proteomics 4 2004 1421 1432
-
(2004)
Proteomics
, vol.4
, pp. 1421-1432
-
-
Karp, N.A.1
Kreil, D.P.2
Lilley, K.S.3
-
16
-
-
0038434132
-
Evaluation of individual protein errors in silver-stained two-dimensional gels
-
C.M. Smales, J.R. Birch, A.J. Racher, C.T. Marshall, and D.C. James Evaluation of individual protein errors in silver-stained two-dimensional gels Biochem. Biophys. Res. Commun. 306 2003 1050 1055
-
(2003)
Biochem. Biophys. Res. Commun.
, vol.306
, pp. 1050-1055
-
-
Smales, C.M.1
Birch, J.R.2
Racher, A.J.3
Marshall, C.T.4
James, D.C.5
-
19
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Y.H. Yang, S. Dudoit, P. Luu, D.M. Lin, V. Peng, J. Ngai, and T.P. Speed Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation Nucleic Acids Res. 30 2002 e15
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 15
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, J.6
Speed, T.P.7
-
20
-
-
0042424602
-
Statistical significance for genome wide studies
-
J.D. Storey, and R. Tibshirani Statistical significance for genome wide studies Proc. Natl. Acad. Sci. USA 100 2003 9440 9445
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
21
-
-
0036020944
-
Operating characteristics and extensions of the false discovery rate procedure
-
C. Genovese, and L. Wasserman Operating characteristics and extensions of the false discovery rate procedure J. R. Stat. Soc. 64 2002 499 517
-
(2002)
J. R. Stat. Soc.
, vol.64
, pp. 499-517
-
-
Genovese, C.1
Wasserman, L.2
-
22
-
-
0036953264
-
Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments
-
M.A. Black, and R.W. Doerge Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments Bioinformatics 18 2002 1609 1616
-
(2002)
Bioinformatics
, vol.18
, pp. 1609-1616
-
-
Black, M.A.1
Doerge, R.W.2
|