-
1
-
-
0033428888
-
Programmed ribosomal frameshifting: Much ado about knotting!
-
ALAM, S.L., ATKINS, J.F., and GESTELAND, R.F. (1999). Programmed ribosomal frameshifting: much ado about knotting! Proc Natl Acad Sci USA 96, 14177-14179.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 14177-14179
-
-
Alam, S.L.1
Atkins, J.F.2
Gesteland, R.F.3
-
2
-
-
0035165680
-
RECODE: A database of frameshifting, bypassing and codon redefinition utilized for gene expression
-
BARANOV, P.V., GURVICH, O.L., FAYET, O., et al. (2001). RECODE: a database of frameshifting, bypassing and codon redefinition utilized for gene expression. Nucleic Acids Res 29, 264-267.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 264-267
-
-
Baranov, P.V.1
Gurvich, O.L.2
Fayet, O.3
-
3
-
-
0017298367
-
Overlapping genes in bacteriophage phiX174
-
BARRELL, B.C., AIR, G.M., and HUTCHISON, C.A., III. (1976). Overlapping genes in bacteriophage phiX174. Nature 264, 34-41.
-
(1976)
Nature
, vol.264
, pp. 34-41
-
-
Barrell, B.C.1
Air, G.M.2
Hutchison III, C.A.3
-
4
-
-
0036259882
-
Regulation of the overlapping pic/set locus in Shigella flexneri and enteroaggregative Escherichia coli
-
BEHRENS, M., SHEIKH, J., and NATARO, J.P. (2002). Regulation of the overlapping pic/set locus in Shigella flexneri and enteroaggregative Escherichia coli. Infect Immun 70, 2915-2925.
-
(2002)
Infect Immun
, vol.70
, pp. 2915-2925
-
-
Behrens, M.1
Sheikh, J.2
Nataro, J.P.3
-
5
-
-
0029284804
-
G and C accumulation at silent positions of codons produces additional ORFs
-
BOLDOGKOI, Z., MURVAI, J., and FODOR, I. (1995). G and C accumulation at silent positions of codons produces additional ORFs. Trends Genet 11, 125-126.
-
(1995)
Trends Genet
, vol.11
, pp. 125-126
-
-
Boldogkoi, Z.1
Murvai, J.2
Fodor, I.3
-
6
-
-
0031911710
-
The role of the genetic code in generating new coding sequences inside existing genes
-
CEBRAT, S., MACKIEWICZ, P., and DUDEK, M.R. (1998). The role of the genetic code in generating new coding sequences inside existing genes. Biosystems 45, 165-176.
-
(1998)
Biosystems
, vol.45
, pp. 165-176
-
-
Cebrat, S.1
Mackiewicz, P.2
Dudek, M.R.3
-
7
-
-
1542618322
-
Codon usage between genomes is constrained by genome-wide mutational processes
-
CHEN, S.L., LEE, W., HOTTES, A.K., et al. (2004). Codon usage between genomes is constrained by genome-wide mutational processes. Proc Natl Acad Sci USA 101, 3480-3485.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 3480-3485
-
-
Chen, S.L.1
Lee, W.2
Hottes, A.K.3
-
8
-
-
0018682244
-
Evolution of the three overlapping gene systems in G4 and phi X174
-
FIDDES, J.C., and GODSON, G.N. (1979). Evolution of the three overlapping gene systems in G4 and phi X174. J Mol Biol 133, 19-13.
-
(1979)
J Mol Biol
, vol.133
, pp. 19-13
-
-
Fiddes, J.C.1
Godson, G.N.2
-
9
-
-
0028789663
-
Sense in antisense?
-
FORSDYKE, D.R. (1995). Sense in antisense? J Mol Evol 41, 582-586.
-
(1995)
J Mol Evol
, vol.41
, pp. 582-586
-
-
Forsdyke, D.R.1
-
10
-
-
11144310562
-
Estimation of the number of authentic orphan genes in bacterial genomes
-
FUKUCHI, S., and NISHIKAWA, K. (2004). Estimation of the number of authentic orphan genes in bacterial genomes. DNA Res 11, 219-231, 311-313.
-
(2004)
DNA Res
, vol.11
, pp. 219-231
-
-
Fukuchi, S.1
Nishikawa, K.2
-
11
-
-
0033561022
-
Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniae
-
FUKUDA, Y., WASHIO, T., and TOMITA, M. (1999). Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniae. Nucleic Acids Res 27, 1847-1853.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1847-1853
-
-
Fukuda, Y.1
Washio, T.2
Tomita, M.3
-
12
-
-
0033066825
-
Identification of putative programmed -1 ribosomal frameshift signals in large DNA databases
-
HAMMELL, A.B., TAYLOR, R.C., PELTZ, S.W., et al. (1999). Identification of putative programmed -1 ribosomal frameshift signals in large DNA databases. Genome Res 9, 417-427.
-
(1999)
Genome Res
, vol.9
, pp. 417-427
-
-
Hammell, A.B.1
Taylor, R.C.2
Peltz, S.W.3
-
13
-
-
0035667322
-
Overlapping genes in parasitic protist Giardia lamblia
-
IWABE, N., and MIYATA, T. (2001). Overlapping genes in parasitic protist Giardia lamblia. Gene 280, 163-167.
-
(2001)
Gene
, vol.280
, pp. 163-167
-
-
Iwabe, N.1
Miyata, T.2
-
14
-
-
8744308029
-
Properties of overlapping genes are conserved across microbial genomes
-
JOHNSON, Z.I., and CHISHOLM, S.W. (2004). Properties of overlapping genes are conserved across microbial genomes. Genome Res 14, 2268-2272.
-
(2004)
Genome Res
, vol.14
, pp. 2268-2272
-
-
Johnson, Z.I.1
Chisholm, S.W.2
-
15
-
-
0035220937
-
A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes
-
RESEARCH0010
-
KNIGHT, R.D., FREELAND, S.J., and LANDWEBER, L.F. (2001). A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes. Genome Biol 2, RESEARCH0010.
-
(2001)
Genome Biol
, vol.2
-
-
Knight, R.D.1
Freeland, S.J.2
Landweber, L.F.3
-
16
-
-
0036468258
-
Antisense transcripts in the human genome
-
LEHNER, B., WILLIAMS, G., CAMPBELL, R.D., et al. (2002). Antisense transcripts in the human genome. Trends Genet 18, 63-65.
-
(2002)
Trends Genet
, vol.18
, pp. 63-65
-
-
Lehner, B.1
Williams, G.2
Campbell, R.D.3
-
17
-
-
0027994394
-
Molecular characterization of an NAD-specific glutamate dehydrogenase gene inducible by L-glutamine. Antisense gene pair arrangement with L-glutamine-inducible heat shock 70-like protein gene
-
LEJOHN, H.B., CAMERON, L.E., YANG, B., et al. (1994). Molecular characterization of an NAD-specific glutamate dehydrogenase gene inducible by L-glutamine. Antisense gene pair arrangement with L-glutamine-inducible heat shock 70-like protein gene. J Biol Chem 269, 4523-1531.
-
(1994)
J Biol Chem
, vol.269
, pp. 4523-1531
-
-
Lejohn, H.B.1
Cameron, L.E.2
Yang, B.3
-
18
-
-
0033198828
-
Origin and properties of non-coding ORFs in the yeast genome
-
MACKIEWICZ, P., KOWALCZUK, M., GIERLIK, A., et al. (1999). Origin and properties of non-coding ORFs in the yeast genome. Nucleic Acids Res 27, 3503-3509.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3503-3509
-
-
Mackiewicz, P.1
Kowalczuk, M.2
Gierlik, A.3
-
19
-
-
0033802424
-
IS1414, an Escherichia coli insertion sequence with a heat-stable enterotoxin gene embedded in a transposase-like gene
-
MCVEIGH, A., FASANO, A., SCOTT, D.A., et al. (2000). IS1414, an Escherichia coli insertion sequence with a heat-stable enterotoxin gene embedded in a transposase-like gene. Infect Immun 68, 5710-5715.
-
(2000)
Infect Immun
, vol.68
, pp. 5710-5715
-
-
McVeigh, A.1
Fasano, A.2
Scott, D.A.3
-
20
-
-
0028307664
-
Antisense overlapping open reading frames in genes from bacteria to humans
-
MERINO, E., BALBAS, P., PUENTE, J.L., et al. (1994). Antisense overlapping open reading frames in genes from bacteria to humans. Nucleic Acids Res 22, 1903-1908.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 1903-1908
-
-
Merino, E.1
Balbas, P.2
Puente, J.L.3
-
21
-
-
0028890559
-
Luteovirus gene expression
-
MILLER, W.A., DINESH-KUMAR, S.P., and PAUL, C.P. (1995). Luteovirus gene expression. Crit Rev Plant Sci 14, 179-211.
-
(1995)
Crit Rev Plant Sci
, vol.14
, pp. 179-211
-
-
Miller, W.A.1
Dinesh-Kumar, S.P.2
Paul, C.P.3
-
22
-
-
0030976687
-
On the informational content of overlapping genes in prokaryotic and eukaryotic viruses
-
PAVESI, A., DE IACO, B., GRANERO, M.I., et al. (1997). On the informational content of overlapping genes in prokaryotic and eukaryotic viruses. J Mol Evol 44, 625-631.
-
(1997)
J Mol Evol
, vol.44
, pp. 625-631
-
-
Pavesi, A.1
De Iaco, B.2
Granero, M.I.3
-
23
-
-
0036575455
-
Purifying and directional selection in overlapping prokaryotic genes
-
ROGOZIN, I.B., SPIRIDONOV, A.N., SOROKlN, A.V., et al. (2002). Purifying and directional selection in overlapping prokaryotic genes. Trends Genet 18, 228-232.
-
(2002)
Trends Genet
, vol.18
, pp. 228-232
-
-
Rogozin, I.B.1
Spiridonov, A.N.2
Sorokln, A.V.3
-
24
-
-
0036279618
-
Activation of prophage eib genes for immunoglobulin-binding proteins by genes from the IbrAB genetic island of Escherichia coli ECOR-9
-
SANDT, C.H., HOPPER, J.E., and HILL, C.W. (2002). Activation of prophage eib genes for immunoglobulin-binding proteins by genes from the IbrAB genetic island of Escherichia coli ECOR-9. J Bacteriol 184, 3640-3648.
-
(2002)
J Bacteriol
, vol.184
, pp. 3640-3648
-
-
Sandt, C.H.1
Hopper, J.E.2
Hill, C.W.3
-
25
-
-
0023650543
-
The codon Adaptation Index - A measure of directional synonymous codon usage bias, and its potential applications
-
SHARP, P.M., and LI, W.H. (1987). The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15, 1281-1295.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
26
-
-
0037158780
-
Computational discovery of sense-antisense transcription in the human and mouse genomes
-
RESEARCH0044
-
SHENDURE, J., and CHURCH, G.M. (2002). Computational discovery of sense-antisense transcription in the human and mouse genomes. Genome Biol 3, RESEARCH0044.
-
(2002)
Genome Biol
, vol.3
-
-
Shendure, J.1
Church, G.M.2
-
27
-
-
0030878527
-
The majority of long non-stop reading frames on the antisense strand can be explained by biased codon usage
-
SILKE, J. (1997). The majority of long non-stop reading frames on the antisense strand can be explained by biased codon usage. Gene 194, 143-155.
-
(1997)
Gene
, vol.194
, pp. 143-155
-
-
Silke, J.1
-
28
-
-
0032953035
-
A novel Bacillus subtilis gene, antE, temporally regulated and convergent to and overlapping dnaE
-
WANG, L.F., PARK, S.S., and DOI, R.H. (1999). A novel Bacillus subtilis gene, antE, temporally regulated and convergent to and overlapping dnaE. J Bacteriol 181, 353-356.
-
(1999)
J Bacteriol
, vol.181
, pp. 353-356
-
-
Wang, L.F.1
Park, S.S.2
Doi, R.H.3
-
29
-
-
12244275645
-
Widespread occurrence of antisense transcription in the human genome
-
YELIN, R., DAHARY, D., SOREK, R., et al. (2003). Widespread occurrence of antisense transcription in the human genome. Nat Biotechnol 21, 379-386.
-
(2003)
Nat Biotechnol
, vol.21
, pp. 379-386
-
-
Yelin, R.1
Dahary, D.2
Sorek, R.3
-
30
-
-
0037468433
-
Overlapping gene structure of human VLCAD and DLG4
-
ZHOU, C., and BLUMBERG, B. (2003). Overlapping gene structure of human VLCAD and DLG4. Gene 305, 161-166.
-
(2003)
Gene
, vol.305
, pp. 161-166
-
-
Zhou, C.1
Blumberg, B.2
-
31
-
-
0025338172
-
Is genetic code redundancy related to retention of structural information in both DNA strands?
-
ZULL, J.E., and SMITH, S.K. (1990). Is genetic code redundancy related to retention of structural information in both DNA strands? Trends Biochem Sci 15, 257-261.
-
(1990)
Trends Biochem Sci
, vol.15
, pp. 257-261
-
-
Zull, J.E.1
Smith, S.K.2
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