-
1
-
-
0032707954
-
Finding the right fold
-
D.P. Goldberg Finding the right fold Nat. Struct. Biol. 6 1999 987 990
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 987-990
-
-
Goldberg, D.P.1
-
2
-
-
0034604105
-
A surprising simplicity to protein folding
-
D. Baker A surprising simplicity to protein folding Nature 405 2000 39 42
-
(2000)
Nature
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
3
-
-
0033613255
-
Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures
-
E. Alm, and D. Baker Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures Proc. Natl. Acad. Sci. U. S. A. 96 1999 11305 11310
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 11305-11310
-
-
Alm, E.1
Baker, D.2
-
5
-
-
0026511656
-
The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding
-
A.R. Fersht, A. Matouschek, and L. Serrano The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding J. Mol. Biol. 224 1992 771 782
-
(1992)
J. Mol. Biol.
, vol.224
, pp. 771-782
-
-
Fersht, A.R.1
Matouschek, A.2
Serrano, L.3
-
6
-
-
0032734515
-
Experiment and theory highlight role of native state topology in SH3 folding
-
D.S. Riddle, V.P. Grantcharova, J.V. Santiago, E. Alm, I. Ruczinski, and D. Baker Experiment and theory highlight role of native state topology in SH3 folding Nat. Struct. Biol. 6 1999 1016 1024
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 1016-1024
-
-
Riddle, D.S.1
Grantcharova, V.P.2
Santiago, J.V.3
Alm, E.4
Ruczinski, I.5
Baker, D.6
-
7
-
-
0032750509
-
The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved
-
J.C. Martinez, and L. Serrano The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved Nat. Struct. Biol. 6 1999 1010 1016
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 1010-1016
-
-
Martinez, J.C.1
Serrano, L.2
-
8
-
-
2342451295
-
Transition states for protein folding have native topologies despite high structural variability
-
K. Lindorff-Larsen, M. Vendruscolo, E. Paci, and C.M. Dobson Transition states for protein folding have native topologies despite high structural variability Nat. Struct. Mol. Biol. 11 2004 443 449
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 443-449
-
-
Lindorff-Larsen, K.1
Vendruscolo, M.2
Paci, E.3
Dobson, C.M.4
-
9
-
-
0032515105
-
Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain
-
V. Villegas, J.C. Martinez, F.X. Aviles, and L. Serrano Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain J. Mol. Biol. 283 1998 1027 1036
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 1027-1036
-
-
Villegas, V.1
Martinez, J.C.2
Aviles, F.X.3
Serrano, L.4
-
10
-
-
0032708771
-
Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding
-
F. Chiti, N. Taddei, P.M. White, M. Bucciantini, F. Magherini, M. Stefani, and C.M. Dobson Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding Nat. Struct. Biol. 6 1999 1005 1009
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 1005-1009
-
-
Chiti, F.1
Taddei, N.2
White, P.M.3
Bucciantini, M.4
Magherini, F.5
Stefani, M.6
Dobson, C.M.7
-
11
-
-
0033200251
-
Folding studies of immunoglobulin-like beta-sandwich proteins suggest that they share a common folding pathway
-
J. Clarke, E. Cota, S.B. Fowler, and S.J. Hamill Folding studies of immunoglobulin-like beta-sandwich proteins suggest that they share a common folding pathway Struct. Fold. Des. 7 1999 1145 1153
-
(1999)
Struct. Fold. Des.
, vol.7
, pp. 1145-1153
-
-
Clarke, J.1
Cota, E.2
Fowler, S.B.3
Hamill, S.J.4
-
13
-
-
0031792027
-
The equilibrium unfolding of Azotobacter vinelandii apoflavodoxin II occurs via a relatively stable folding intermediate
-
C.P.M. van Mierlo, W.M. van Dongen, F. Vergeldt, W.J. van Berkel, and E. Steensma The equilibrium unfolding of Azotobacter vinelandii apoflavodoxin II occurs via a relatively stable folding intermediate Protein Sci. 7 1998 2331 2344
-
(1998)
Protein Sci.
, vol.7
, pp. 2331-2344
-
-
Van Mierlo, C.P.M.1
Van Dongen, W.M.2
Vergeldt, F.3
Van Berkel, W.J.4
Steensma, E.5
-
15
-
-
4043074820
-
Formation of on- and off-pathway intermediates in the folding kinetics of Azotobacter vinelandii apoflavodoxin
-
Y.J.M. Bollen, I.E. Sánchez, and C.P.M. van Mierlo Formation of on- and off-pathway intermediates in the folding kinetics of Azotobacter vinelandii apoflavodoxin Biochemistry 43 2004 10475 10489
-
(2004)
Biochemistry
, vol.43
, pp. 10475-10489
-
-
Bollen, Y.J.M.1
Sánchez, I.E.2
Van Mierlo, C.P.M.3
-
16
-
-
0031565915
-
A structural census of genomes: Comparing bacterial, eukaryotic, and archaeal genomes in terms of protein structure
-
M. Gerstein A structural census of genomes: comparing bacterial, eukaryotic, and archaeal genomes in terms of protein structure J. Mol. Biol. 274 1997 562 576
-
(1997)
J. Mol. Biol.
, vol.274
, pp. 562-576
-
-
Gerstein, M.1
-
17
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
A.G. Murzin, S.E. Brenner, T. Hubbard, and C. Chothia SCOP: a structural classification of proteins database for the investigation of sequences and structures J. Mol. Biol. 247 1995 536 540
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
18
-
-
0025272240
-
Rapid and sensitive sequence comparison with FASTP and FASTA
-
W.R. Pearson Rapid and sensitive sequence comparison with FASTP and FASTA Methods Enzymol. 183 1990 63 98
-
(1990)
Methods Enzymol.
, vol.183
, pp. 63-98
-
-
Pearson, W.R.1
-
19
-
-
0030334834
-
Structure of the transition state for folding of the 129 aa protein CheY resembles that of a smaller protein, CI-2
-
E. Lopez-Hernandez, and L. Serrano Structure of the transition state for folding of the 129 aa protein CheY resembles that of a smaller protein, CI-2 Fold. Des. 1 1996 43 55
-
(1996)
Fold. Des.
, vol.1
, pp. 43-55
-
-
Lopez-Hernandez, E.1
Serrano, L.2
-
20
-
-
0031588693
-
Folding kinetics of Che Y mutants with enhanced native alpha-helix propensities
-
E. Lopez-Hernandez, P. Cronet, L. Serrano, and V. Munoz Folding kinetics of Che Y mutants with enhanced native alpha-helix propensities J. Mol. Biol. 266 1997 610 620
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 610-620
-
-
Lopez-Hernandez, E.1
Cronet, P.2
Serrano, L.3
Munoz, V.4
-
21
-
-
0028820703
-
Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding
-
J.K. Myers, C.N. Pace, and J.M. Scholtz Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding Protein Sci. 4 1995 2138 2148
-
(1995)
Protein Sci.
, vol.4
, pp. 2138-2148
-
-
Myers, J.K.1
Pace, C.N.2
Scholtz, J.M.3
-
22
-
-
0028176281
-
Kinetic characterization of the chemotactic protein from Escherichia coli, CheY. Kinetic analysis of the inverse hydrophobic effect
-
V. Munoz, E.M. Lopez, M. Jager, and L. Serrano Kinetic characterization of the chemotactic protein from Escherichia coli, CheY. Kinetic analysis of the inverse hydrophobic effect Biochemistry 33 1994 5858 5866
-
(1994)
Biochemistry
, vol.33
, pp. 5858-5866
-
-
Munoz, V.1
Lopez, E.M.2
Jager, M.3
Serrano, L.4
-
23
-
-
0038070096
-
Trehalose favors a cutinase compact intermediate off-folding pathway
-
E.P. Melo, L. Chen, J.M. Cabral, P. Fojan, S.B. Petersen, and D.E. Otzen Trehalose favors a cutinase compact intermediate off-folding pathway Biochemistry 42 2003 7611 7617
-
(2003)
Biochemistry
, vol.42
, pp. 7611-7617
-
-
Melo, E.P.1
Chen, L.2
Cabral, J.M.3
Fojan, P.4
Petersen, S.B.5
Otzen, D.E.6
-
24
-
-
0035909813
-
Apoflavodoxin folding mechanism: An alpha/beta protein with an essentially off-pathway intermediate
-
J. Fernandez-Recio, C.G. Genzor, and J. Sancho Apoflavodoxin folding mechanism: an alpha/beta protein with an essentially off-pathway intermediate Biochemistry 40 2001 15234 15245
-
(2001)
Biochemistry
, vol.40
, pp. 15234-15245
-
-
Fernandez-Recio, J.1
Genzor, C.G.2
Sancho, J.3
-
25
-
-
0032566696
-
Structural characterisation of apoflavodoxin shows that the location of the stable nucleus differs among proteins with a flavodoxin-like topology
-
E. Steensma, and C.P.M. van Mierlo Structural characterisation of apoflavodoxin shows that the location of the stable nucleus differs among proteins with a flavodoxin-like topology J. Mol. Biol. 282 1998 653 666
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 653-666
-
-
Steensma, E.1
Van Mierlo, C.P.M.2
-
26
-
-
0034685604
-
Topological and energetic factors: What determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins
-
C. Clementi, H. Nymeyer, and J.N. Onuchic Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins J. Mol. Biol. 298 2000 937 953
-
(2000)
J. Mol. Biol.
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
27
-
-
0032847748
-
Elementary steps in protein folding
-
O. Bieri, and T. Kiefhaber Elementary steps in protein folding Biol. Chem. 380 1999 923 929
-
(1999)
Biol. Chem.
, vol.380
, pp. 923-929
-
-
Bieri, O.1
Kiefhaber, T.2
-
28
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
P.J. Kraulis MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures J. Appl. Crystallogr. 24 1991 946 950
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
29
-
-
0343230593
-
Flavodoxin and nitrogen fixation: Structure, electrochemistry and posttranslational modification by coenzyme a
-
K. Yagi Walter de Gruyter Berlin
-
R.N.F. Thorneley, G.A. Ashby, M.H. Drummond, R.R. Eady, D.L. Hughes, G. Ford, P.M. Harrison, A. Shaw, R.L. Robson, J. Kazlauskaite, and H.A.O. Hill Flavodoxin and nitrogen fixation: structure, electrochemistry and posttranslational modification by coenzyme A K. Yagi Flavins and flavoproteins 1993 Walter de Gruyter Berlin 343 354
-
(1993)
Flavins and Flavoproteins
, pp. 343-354
-
-
Thorneley, R.N.F.1
Ashby, G.A.2
Drummond, M.H.3
Eady, R.R.4
Hughes, D.L.5
Ford, G.6
Harrison, P.M.7
Shaw, A.8
Robson, R.L.9
Kazlauskaite, J.10
Hill, H.A.O.11
-
30
-
-
0043237588
-
Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding
-
F. Krieger, B. Fierz, O. Bieri, M. Drewello, and T. Kiefhaber Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding J. Mol. Biol. 332 2003 265 274
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 265-274
-
-
Krieger, F.1
Fierz, B.2
Bieri, O.3
Drewello, M.4
Kiefhaber, T.5
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