Identification of a novel helicase activity unwinding branched DNAs from the hyperthermophilic archaeon, Pyrococcus furiosus

Journal of Biological Chemistry

Volumn 280, Issue 13, 2005, Pages 12351-12358

  Fujikane, Ryosuke ^a,b,c   Komori, Kayoko ^b   Shinagawa, Hideo ^c   Ishino, Yoshizumi ^a,b  

^a KYUSHU UNIVERSITY   (Japan)

^b BIOMOL ENG RESEARCH INSTITUTE   (Japan)

^c OSAKA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINETRIPHOSPHATE; AMINO ACIDS; BACTERIA; BIOASSAY; BIOCHEMISTRY; CHROMATOGRAPHIC ANALYSIS; GENES; MOLECULAR BIOLOGY; PLANTS (BOTANY); PURIFICATION; YEAST;

HELICASE; HJM PROTEIN; HOLIDAY JUNCTION MIGRATION (HJM); HOMOLOGY;

DNA;

ADENOSINE TRIPHOSPHATE; AMINO ACID; ARCHAEAL DNA; BACTERIAL PROTEIN; CELL EXTRACT; GENOMIC DNA; HELICASE; PROTEIN HOLIDAY JUNCTION MIGRATION; UNCLASSIFIED DRUG;

ARCHEAN; ARTICLE; BACTERIAL GENE; BACTERIUM; CELL ACTIVITY; CELL JUNCTION; CELL MIGRATION; CHROMATOGRAPHY; CONTROLLED STUDY; DNA REPAIR; ENZYME ACTIVITY; GENETIC CODE; HOLIDAY JUNCTION MIGRATION GENE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN PURIFICATION; PYROCOCCUS FURIOSUS; SEQUENCE HOMOLOGY; THERMOPHILIC BACTERIUM; YEAST;

ADENOSINE TRIPHOSPHATE; AMINO ACID SEQUENCE; ANIMALS; CLONING, MOLECULAR; CONSERVED SEQUENCE; DNA HELICASES; DNA POLYMERASE I; DNA REPAIR ENZYMES; DNA, ARCHAEAL; DNA, CRUCIFORM; DNA-BINDING PROTEINS; DOSE-RESPONSE RELATIONSHIP, DRUG; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; ESCHERICHIA COLI PROTEINS; HUMANS; MOLECULAR SEQUENCE DATA; PLASMIDS; PROTEIN STRUCTURE, TERTIARY; PYROCOCCUS FURIOSUS; RECOMBINANT PROTEINS; SEQUENCE ANALYSIS, DNA; SOFTWARE; TEMPERATURE;

EID: 16844380971     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M413417200     Document Type: Article

References (42)

1. Holliday, R. (1964) Genet. Res. 5, 282-304
2. Kowalczykowski, S. C., Dixon, D. A., Eggleston, A. K., Lauder, S. D., and Rehrauer, W. M. (1994) Microbiol. Rev. 58, 401-465
3. Shinohara, A., and Ogawa, T. (1995) Trends Biochem. Sci. 20, 387-391
4. Shinagawa, H., and Iwasakai, H. (1996) Trends Biochem. Sci. 21, 107-111
5. West, S. C. (1997) Annu. Rev. Genet. 31, 213-244
6. Elborough, K., and West, S. C. (1990) EMBO J. 9, 2931-2936
7. Hyde, H., Davies, A. A., Benson, F. E., and West, S. C. (1994) J. Biol. Chem. 269, 5202-5209
8. Constantinou, A., Davies, A. A., and West, S. C. (2001) Cell 104, 259-268
9. Constantinou, A., Chen, X. B., McGowan, C. H., and West, S. C. (2002) EMBO J. 21, 5577-5585
10. Liu, Y., Masson, J.-Y., Shah, R., O'Regan, P., West, S. C. (2004) Science 303, 243-246
11. Woese, C. R., and Fox, G. E. (1977) Proc. Natl. Acad. Sci. U. S. A. 74, 5088-5090
12. Olsen, G. J., and Woese, C. R. (1997) Cell 89, 991-994
13. Hayashi, I., Morikawa, K., and Ishino, Y. (1999) Nucleic Acids Res. 27, 4695-4702
14. Komori, K., Miyata, T., DiRuggiero, J., Holley-Shanks, R., Hayashi, I., Cann, I. K. O., Mayanagi, K., Shinagawa, H., and Ishino, Y. (2000) J. Biol. Chem. 275, 33782-33790
15. Komori, K., Miyata, T., Daiyasu, H., Toh, H., Shinagawa, H., and Ishino, Y. (2000) J. Biol. Chem. 275, 33791-33797
16. Uemori, T., Sato, Y., Kato I., and Ishino Y. (1995) Genes Cells 2, 499-512
17. DiRuggiero, J., and Robb, F. (1998) in New Developments in Marine Bio/Technology (Le Gal, Y., and Halvorson, H., eds) pp. 193-196, Plenum Press, New York
18. Komori, K., and Ishino, Y. (2001) J. Biol. Chem. 276, 25654-25660
19. Hopfner, K. P., Karcher, A., Shin, D., Fairley, C., Tainer, J. A., and Carney, J. P. (2000) J. Bacteriol. 182, 6036-6041
20. Hopfner, K. P., Karcher, A., Craig, L., Woo, T. T., Carney, J. P., and Tainer, J. A. (2001) Cell 105, 473-485
21. Komori, K., Sakae, S., Shinagawa, H., Morikawa, K., and Ishino, Y. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 8873-8878
22. Komori, K., Sakae, S., Daiyasu, H., Toh, H., Morikawa, K., Shinagawa, H., and Ishino, Y. (2000) J. Biol. Chem. 275, 40385-40391
23. Nishino, T., Komori, K., Tsuchiya, D., Ishino, Y., and Morikawa, K. (2001) Structure 9, 197-204
24. Lilley, D. M., and White, M. F. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 9351-9353
25. Komori, K., Sakae, S., Fujikane, R., Morikawa, K., Shinagawa, H., and Ishino, Y. (2000) Nucleic Acids Res. 28, 4544-4551
26. Komori, K., Fujikane, R., Shinagawa, H., and Ishino, Y. (2002) Genes Genet. Syst. 77, 227-241
27. Uemori, T., Ishino, Y., Toh, H., Asada, K., and Kato, I. (1993) Nucleic Acids Res. 21, 259-265
28. Ishino, Y., Iwasaki, H., Fukui, H., Mineno, J., Kato, I., and Shinagawa, H. (1992) Biochimie (Paris) 74, 131-136
29. Muller, B. C., Jones, C., Kemper, B., and West, S. (1990) Cell 60, 329-336
30. Gorbalenya, A. E., and Koonin, E. V. (1993) Curr. Biol. 3, 419-429
31. Boyd, J. B., Sakaguchi, K., and Harris, P. V. (1990) Genetics 125, 813-819
32. Marini, F., and Wood R. D. (2002) J. Biol. Chem. 277, 8716-8723
33. Seki, M., Marini, F., and Wood R. D. (2004) Nucleic Acids Res. 31, 6117-6126
34. Eggleston, A. K. Mitchell, A. H., and West, S. C. (1997) Cell 89, 607-617
35. Davies, A. A., and West, S. C. (1998) Curr. Biol. 8, 725-727
36. Zerbib, D., Mezard, C., George, H., and West, S. C. (1998) J. Mol. Biol. 281, 621-630
37. van Gool, A. J., Hajibagheri, N. M. A., Stasiak, A., and West, S. C. (1999) Genes Dev. 13, 1861-1870
38. Oshige, M., Aoyagi, N., Harris, P. V., Burtis, K., and Sakaguchi, K. (1999) Mutation Res. 433, 183-192
39. Sharief, F. S., Vojta, P. J., Ropp, P. A., and Copeland, W. C. (1999) Genomics 59, 90-96
40. Sladek, F. M., Munn, M. M., Rupp, W. D., and Howard-Flanders, P. (1989) J. Biol. Chem. 263, 16553-16560
41. Yamada, K., Fukuoh, A., Iwasaki, H., and Shinagawa, H. (1999) Mol. Gen. Genet. 261, 1001-1011
42. Ohnishi, T., Iwasaki, H., Ishino, Y., Kuramitsu, S., Nakata, A., Shinagawa, H. (2000) Genes Genet. Syst. 75, 233-243