Semi-automated population of an online database of neuronal models (ModelDB) with citation information, using PubMed for validation

Neuroinformatics

Volumn 2, Issue 3, 2004, Pages 327-332

  Davison, Andrew P ^a   Morse, Thomas M ^b   Migliore, Michele ^b,c   Shepherd, Gordon M ^b   Hines, Michael L ^b  

^a CNRS   (France)

^b YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c CNR   (Italy)

Author keywords

Data entry; Interoperability; Literature search; Neuroscience database; Populating databases

Indexed keywords

ARTICLE; BIBLIOGRAPHIC DATABASE; BIOLOGICAL MODEL; MEDICAL INFORMATION; MEDLINE; ONLINE SYSTEM; PRIORITY JOURNAL; PUBLICATION; PUBLISHING; VALIDATION PROCESS; STANDARD;

DATABASES, BIBLIOGRAPHIC; MODELS, NEUROLOGICAL; ONLINE SYSTEMS; PERIODICALS; PUBLISHING; PUBMED;

EID: 16544392042     PISSN: 15392791     EISSN: None     Source Type: Journal    
DOI: 10.1385/NI:2:3:327     Document Type: Article

References (6)

1. Crasto C. J., Marenco L., Migliore M., Mao B., Nadkarni P. M., Miller P. L., and Shepherd G. M. (2003) Text Mining Neuroscience Journal Articles to Populate Neuroscience Databases. Neuroinformatics 3, 215-238.
2. Davison A. P., Morse T. M., Migliore M., Marenco L., Shepherd G. M., and Hines M. L. (2003) ModelDB: A Resource for Neuronal and Network Modeling, in Neuroscience databases: a practical guide, R. Kotter, ed., Kluwer Academic, Boston, pp. 99-109.
3. Marenco L., Tosches N., Crasto C., Shepherd G., Miller P. L., and Nadkarni P. M. (2003) Achieving evolvable Web-database bioscience applications using the EAV/CR framework: recent advances. J. Am. Med. Inform. Assoc. 10, 444-453.
4. Migliore M., Morse T. M., Davison A. P., Marenco L., Shepherd G. M., and Hines M. L. (2003) ModelDB Making models publicly accessible to support computational neuroscience. Neuroinformatics 1, 131-134.
5. Miller P. L., Nadkarni P., Singer M., Marenco L., Hines M., and Shepherd G. (2001) Integration of multidisciplinary sensory data: a pilot model of the human brain project approach. J. Am. Med. Inform. Assoc. 8, 34-48.
6. Mirsky J. S., Nadkarni P. M., Healy M. D., Miller P. L., and Shepherd G. M. (1998) Database tools for integrating and searching membrane property data correlated with neuronal morphology. J. Neurosci. Methods 82, 105-121.