Light signals, phytochromes and cross-talk with other environmental cues

Journal of Experimental Botany

Volumn 55, Issue 395, 2004, Pages 271-276

  Franklin, Keara A ^a   Whitelam, Garry C ^a  

^a UNIVERSITY OF LEICESTER   (United Kingdom)

Author keywords

Arabidopsis; Environmental cues; Light signals; Photoreceptors; Temperature sensing mechanisms

Indexed keywords

CROSSTALK; ENVIRONMENTAL IMPACT; THERMAL EFFECTS;

CRYPTOCHROMES; PHYTOCHROMES;

PLANTS (BOTANY);

PHYTOCHROME;

CONFERENCE PAPER; ENVIRONMENT; LIGHT; PHOTOSYNTHESIS; PHOTOTROPISM; PHYSIOLOGY; PLANT PHYSIOLOGY; RADIATION EXPOSURE; SIGNAL TRANSDUCTION;

ENVIRONMENT; LIGHT; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; PHOTOTROPISM; PHYTOCHROME; PLANT PHYSIOLOGY; RECEPTOR CROSS-TALK; SIGNAL TRANSDUCTION;

ARABIDOPSIS;

EID: 1642523086     PISSN: 00220957     EISSN: None     Source Type: Journal    
DOI: 10.1093/jxb/erh026     Document Type: Conference Paper

References (68)

1. Ahmad M. 1999. Seeing the world in red and blue: insight into plant vision and photoreceptors. Current Opinion in Plant Biology 2, 230-235.
2. Ahmad M, Cashmore AR. 1997. The blue light receptor cryptochrome 1 shows functional dependence on phytochrome A or phytochrome B in Arabidopsis thaliana. The Plant Journal 11, 421-427.
3. Ahmad M, Jarillo J, Smirnova O, and Cashmore AR. 1998. The CRY1 blue light photoreceptor of Arabidopsis interacts with phytochrome A in vitro. Molecular Cell 1, 939-948.
4. Aukerman MJ, Hirschfeld M, Wester L, Weaver M, Clack T, Amasino RM, Sharrock RA. 1997. A deletion in the PHYD gene of the Arabidopsis Wassilewskija ecotype defines a role for phytochrome D in red/far-red light sensing. The Plant Cell 9, 1317-1326.
5. Ballaré CL, Scopel AL, Sánchez RA. 1990. Far-red radiation reflected from adjacent leaves: an early signal of competition in plant canopies. Science 247, 329-332.
6. Blázquez MA, Ahn JH, Weigel D. 2003. A thermosensory pathway controlling flowering time in Arabidopsis thaliana. Nature Genetics 33, 168-171.
7. Casal JJ, Mazzella MA. 1998. Conditional synergism between cryptochrome 1 and phytochrome B is shown by analysis of phyA, phyB, hy4 simple, double and triple mutants in Arabidopsis. Plant Physiology 118, 19-25.
8. Clack T, Mathews S, Sharrock RA. 1994. The phytochrome apoprotein family in Arabidopsis is encoded by five genes: the sequences and expression of PHYD and PHYE. Plant Molecular Biology 25, 413-427.
9. Devlin PF, Halliday KJ, Harberd NP, Whitelam GC. 1996. The rosette habit of Arabidopsis thaliana is dependent upon phytochrome action: novel phytochromes control internode elongation and flowering time. The Plant Journal 10, 1127-1134.
10. Devlin PF, Patel SR, Whitelam GC. 1998. Phytochrome E influences internode elongation and flowering time in Arabidopsis. The Plant Cell 10, 1479-1487.
11. Devlin PF, Robson PRH, Patel SR, Goosey L, Sharrock RA, Whitelam GC. 1999. Phytochrome D acts in the shade-avoidance syndrome in Arabidopsis by controlling elongation and flowering time. Plant Physiology 119, 909-915.
12. Digby J, Firn R. 1995. The gravitropic set-point angle (GSA): the identification of an important developmentally controlled variable governing plant architecture. Plant, Cell and Environment 18, 1434-1440.
13. Franklin KA, Davis SJ, Stoddart WM, Vierstra RD and Whitelam GC. 2003a. Mutant analyses define multiple roles for phytochrome C in Arabidopsis thaliana photomorphogenesis. The Plant Cell 15, 1981-1989.
14. Franklin KA, Praekelt U, Stoddart WM, Billingham OE, Halliday KJ, Whitelam GC. 2003b. Phytochromes B, D and E act redundantly to control multiple physiological responses in Arabidopsis. Plant Physiology 131, 1340-1346.
15. Gaiser JC, Lomax TL. 1993. The altered gravitropic response of the lazy-2 mutant of tomato is phytochrome regulated. Plant Physiology 102, 339-344.
16. Gendall AR, Levy YY, Wilson A, Dean C. 2001. The VERNALIZATION 2 gene mediates the epigenic regulation of vernalization in Arabidopsis. Cell 107, 525-535.
17. Halliday KJ, Koorneef M, Whitelam GC. 1994. Phytochrome B and at least one other phytochrome mediate the accelerated flowering response of Arabidopsis thaliana L. to low red/far-red ratio. Plant Physiology 104, 1311-1315.
18. Halliday KJ, Salter MG, Thingnaes MG, Whitelam GC. 2003. The phyB-controlled flowering pathway is temperature sensitive and is mediated by the floral integrator FT. The Plant Journal 33, 875-885.
19. Hangarter RP. 1997. Gravity, light and plant form. Plant, Cell and Environment 20, 796-800.
20. Hennig L, Funk M, Whitelam GC, Schäfer E. 1999. Functional interaction of cryptochrome 1 and phytochrome D. The Plant Journal 20, 289-294.
21. Hennig L, Stoddart WM, Dieterle M, Whitelam GC, Schäfer E. 2002. Phytochrome E controls light-induced germination of Arabidopsis. Plant Physiology 128, 194-200.
22. Janoudi AK, Gordon WR, Wagner D, Quail P, Poff KL. 1997a Multiple phytochromes are involved in red-light induced enhancement of first positive phototropism in Arabidopsis thaliana. Plant Physiology 113, 975-979.
23. Janoudi AK, Konjevic R, Whitelam GC, Gordon W, Poff KL. 1991b. Both phytochrome A and phytochrome B are required for the normal expression of phototropism in Arabidopsis thaliana seedlings. Physiologia Plantarum 101, 278-282.
24. Johanson U, West J, Lister C, Michaels S, Amasino R, Dean C. 2000. Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time. Science 290, 344-347.
25. Kardailsky I, Shukla VK, Ahn JH, Dagenais N, Christensen SK, Nguyen JT, Chory J, Harrison MJ, Weigel D. 1999. Activation tagging of the floral inducer FT. Science 286, 1962-1965.
26. Kendrick RE, Kronenberg GHM. 1994. Photomorphogenesis in plants, 2nd edn. Dordrecht, The Netherlands: Kluwer Academic Publishers.
27. Kircher S, Kozma-Bognor L, Adam E, Harter K, Schäfer E, Nagy F. 1999. Light quality-dependent nuclear import of the plant photoreceptors A and B. The Plant Cell 11, 1445-1456.
28. Kobayashi Y, Kaya H, Goto K, Iwabuchi M, Araki T. 1999. A pair of related genes with antagonistic roles in mediating flowering signals. Science 286, 1960-1962.
29. Koornneef M, Alonso-Blanco C, Blankestijn-de Vries H, Hanhart CJ, Peeters AJM. 1998. Genetic interactions among late flowering mutants of Arabidopsis. Genetics 148, 885-892.
30. Koornneef M, Rolff E, Spruitt CJP. 1980. Genetic control of light-inhibited hypocotyl elongation in Arabidopsis thaliana L. Heynh. Zeitschrift für Pflanzenphysiologie 100, 147-160.
31. Lee H, Suh SS, Park E, Cho E, Ahn JH, Kim SG, Lee JS, Kwon YM, Lee I. 2000. The AGAMOUS-LIKE 20 MADS domain protein integrates floral inductive pathways in Arabidopsis. Genes and Development 14, 2366-2376.
32. Lin C, Ahmad M, Cashmore AR. 1996. Arabidopsis cryptochrome 1 is a soluble protein mediating blue light-dependent regulation of plant growth and development. The Plant Journal 10, 893-902.
33. Lin C, Yang H, Guo H, Mocker T, Chen J, Cashmore AR. 1998. Enhancement of blue light sensitivity of Arabidopsis seedlings by a blue light receptor cryptochrome 2. Proceedings of the National Academy of Sciences, USA 95, 7686-7699.
34. Liscum E, Hangarter RP. 1993. Genetic evidence that the Pr form of phytochrome B plays a role in Arabidopsis thaliana gravitropism. Plant Physiology 103, 15-19.
35. Lu YT, Hidaka H, Feldman LJ. 1996. Characterization of a calcium/calmodulin-dependent protein kinase homolog from maize roots showing light-regulated gravitropism. Planta 199, 18-24.
36. Martinez-Garcia JF, Huq E, Quail PH. 2000. Direct targeting of light signals to a promoter element-bound transcription factor. Science 288, 859-863.
37. Más P, Devlin P, Panda S, Kay SA. 2000. Functional interaction of phytochrome B and crytochrome 2. Nature 408, 207-211.
38. Mathews S, Sharrock RA. 1997. Phytochrome gene diversity. Plant, Cell and Environment 20, 666-671.
39. Michaels SD, Amasino RM. 2001. Loss of FLOWERING LOCUS C activity eliminates the late-flowering time phenotype of FRIGIDA and autonomous pathway mutations but not responsiveness to vernalization. The Plant Cell 13, 935-941.
40. Michaels SD, Amasino RM. 1999. FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering. The Plant Cell 11, 949-956.
41. Monte E, Alonso JM, Ecker JR, Zhang Y, Li X, Young J, Austin-Phillips S, Quail PH. 2003. Isolation and characterization of phyC mutants in Arabidopsis reveals complex crosstalk between phytochrome signalling pathways. The Plant Cell 15, 1962-1980.
42. Myers AB, Firn RD, Digby J. 1994. Gravitropic sign reversal: a fundamental feature of the gravitropic perception or response mechanisms in some plant organs. Journal of Experimental Botany 45, 77-83.
43. Nagatani A, Reed JW, Chory J. 1993. Isolation and initial characterisation of Arabidopsis mutants that are deficient in functional phytochrome A. Plant Physiology 102, 269-277.
44. Ni M, Tepperman JM, Quail PH. 1999. Binding of phytochrome B to its nuclear signalling partner PIF3 is reversibly induced by light. Nature 400, 781-784.
45. Parks BM, Quail PH, Hangarter RP. 1996. Phytochrome A regulates red light induction of phototropic enhancement in Arabidopsis. Plant Physiology 110, 155-162.
46. Parks BM, Quail PH. 1993. hy8, a new class of Arabidopsis long hypocotyl mutants deficient in functional phytochrome A. The Plant Cell 3, 39-48.
47. Poppe C, Hangarter RP, Sharrock RA, Nagy F, Schäfer E. 1996. The light-induced reduction of the gravitropic growth-orientation of seedlings of Arabidopsis thaliana (L.) Heynh. is a photomorphogenic response mediated synergistically by the far-red absorbing forms of phytochromes A and B. Planta 119, 511-514.
48. Quail PH. 2002. Photosensory perception and signalling in plant cells: new paradigms? Current Opinions in Plant Biology 14, 180-188.
49. Reed JW, Nagatani A, Elich T, Fagan M, Chory J. 1994. Phytochrome A and phytochrome B have overlapping but distinct functions in Arabidopsis development. Plant Physiology 104, 1139-1149.
50. Reed JW, Nagpal P, Poole DS, Furuya M, Chory J. 1993. Mutations in the gene for red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. The Plant Cell 5, 147-157.
51. Robson PRH, Smith H. 1996. Genetic and transgenic evidence that phytochromes A and B act to modulate the gravitropic orientation of Arabidopsis thaliana hypocotyls. Plant Physiology 110, 211-216.
52. Robson PRH, Whitelam GC, Smith H. 1993. Selected components of the shade-avoidance syndrome are displayed in a normal manner in mutants of Arabidopsis thaliana and Brassica rapa deficient in phytochrome B. Plant Physiology 102, 1179-1184.
53. Rouse DT, Sheldon CC, Bagnall DJ, Peacock WJ, Dennis ES. 2002. FLC, a repressor of flowering, is regulated by genes in different inductive pathways. The Plant Journal 29, 183-191.
54. Sakamoto K, Nagatani A. 1996. Nuclear localisation activity of phytochrome B. The Plant Journal 10, 859-868.
55. Samach A, Coupland G. 2000. Time measurement and the control of flowering in plants. Bioessays 22, 38-47.
56. Sheldon CC, Rouse DT, Finnegan EJ, Peacock WJ, Dennis ES. 2000. The molecular basis of vernalization: the central role of FLOWERING LOCUS C (FLC). Proceedings of the National Academy of Sciences, USA 97, 3753-3758.
57. Shinomura T, Nagatani A, Chory J, Furuya M. 1994. The induction of seed germination in Arabidopsis thaliana is regulated principally by phytochrome B and secondarily by phytochrome A. Plant Physiology 104, 363-371.
58. Shinomura T, Nagatani A, Manzawa H, Kubota M, Watanabe M, Furuya M. 1996. Action spectra for phytochrome A and B-specific photoinduction of seed germination in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 93, 8129-8133.
59. Simpson GG, Dean C. 2002. Arabidopsis, the Rosetta stone of flowering time? Science 296, 285-289.
60. Smith H. 1982. Light quality, photoperception and plant strategy. Annual Review of Plant Physiology 33, 481-518.
61. Smith H, Whitelam GC. 1990. Phytochrome, a family of photoreceptors with multiple physiological roles. Plant, Cell and Environment 13, 695-707.
62. Somers DE, Sharrock RA, Tepperman JM, Quail PH. 1991. The hy3 long hypocotyl mutant of Arabidopsis is deficient in phytochrome B. The Plant Cell 3, 1263-1274.
63. Whitelam GC, Devlin PF. 1997. Roles for different phytochromes in Arabidopsis photomorphogenesis. Plant, Cell and Environment 20, 752-758.
64. Whitelam GC, Johnson E, Peng J, Carol P, Anderson MC, Cowl JS, Harberd NP. 1993. Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light. The Plant Cell 5, 757-768.
65. Whitelam GC, Smith H. 1991. Retention of phytochrome-mediated shade avoidance responses in phytochrome-deficient mutants of Arabidopsis, cucumber and tomato. Journal of Plant Physiology 139, 119-125.
66. Yamaguchi R, Nakamura M, Mochizuki N, Kay S, Nagatani A. 1999. Light-dependent translocation of a phytochrome B-GFP fusion protein to the nucleus of transgenic Arabidopsis. Journal of Cell Biology 145, 437-445.
67. Yanovsky MJ, Casal JJ, Whitelam GC. 1995. Phytochrome A, phytochrome B and HY4 are involved in hypocotyl growth responses to natural radiation in Arabidopsis: weak de-etiolation of the phyA mutant under dense canopies. Plant, Cell and Environment 18, 788-794.
68. Yanovsky MJ, Kay SA. 2002. Molecular basis of seasonal time measurement in Arabidopsis. Nature 419, 308-312.