An overview of statistical methods applied to CPR data

Progress in Oceanography

Volumn 57, Issue 2-4, 2003, Pages 235-262

  Beaugrand, G ^a   Ibanez F ^b   Lindley, J A ^a  

^a THE LABORATORY   (United Kingdom)

^b LABORATOIRE D OCÉANOGRAPHIE DE VILLEFRANCHE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; DATA REDUCTION; ECOLOGY; EIGENVALUES AND EIGENFUNCTIONS; MARINE BIOLOGY; STATISTICAL METHODS; DATABASE SYSTEMS; SURVEYS; TIME SERIES ANALYSIS;

EIGENVECTOR FILTERING;

OCEANOGRAPHY;

GEOSTATISTICS; PLANKTON; SAMPLING; STATISTICAL ANALYSIS; BIOLOGICAL SURVEY; DATA INTERPRETATION; INSTRUMENTATION; RELATIVE ABUNDANCE;

ATLANTIC OCEAN; ATLANTIC OCEAN (NORTH);

CONTINUOUS PLANKTON RECORDERS (CPR) SURVEYS; GEOSTATISTICAL METHODS;

EID: 1642409580     PISSN: 00796611     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pocean.2003.08.006     Document Type: Conference Paper

References (89)

1. Angel, M. V. (1994). Spatial distribution of marine organisms: patterns and processes. In P. J. Edwards, R. M. May, & N. R. Webb (Eds.), Large-scale ecology and conservation biology (pp. 59-109). Cambridge: Blackwell Scientific Publications.
2. Anneville, O., Souissi, S., Ibañez, F., Ginot, V., Druart, J. -C., & Angeli, N. (2002). Temporal mapping of phytoplankton assemblages in Lake Geneva: Annual and interannual changes in their patterns of succession. Limnology & Oceanography, 47, 1355-1366.
3. Beare, D. J., & McKenzie, E. (1999a). Connecting ecological and physical time-series: the potential role of changing seasonality. Marine Ecology Progress Series, 178, 307-309.
4. Beare, D. J., & McKenzie, E. (1999b). The multinomial logit model: a new tool for exploring Continuous Plankton Recorder data. Fisheries Oceanography, 8(Suppl. 1), 25-39.
5. Beaugrand, G. (1999). Le programme Continuous Plankton Recorder (CPR) et son application à l'étude des changements spatiotemporels de la biodiversité pélagique en Atlantique nord et en mer du Nord. Océanis, 25, 417-433.
6. Beaugrand, G., & Edwards, M. (2001). Comparison in performance among four indices used to evaluate diversity in pelagic ecosystems. Oceanologica Acta, 24, 467-477.
7. Beaugrand, G., & Ibañez, F. (2002). Spatial dependence of pelagic diversity in the North Atlantic Ocean. Marine Ecology Progress Series, 232, 197-211.
8. Beaugrand, G., Ibañez, F., & Lindley, J. A. (2001). Geographical distribution and seasonal and diel changes of the diversity of calanoid copepods in the North Atlantic and North Sea. Marine Ecology Progress Series, 219, 205-219.
9. Beaugrand, G., Ibañez, F., Lindley, J. A., & Reid, P. C. (2002b). Diversity of calanoid copepods in the North Atlantic and adjacent seas: species associations and biogeography. Marine Ecology Progress Series, 232, 179-195.
10. Beaugrand, G., Ibañez, F., & Reid, P. C. (2000b). Long-term and seasonal fluctuations of plankton in relation to hydroclimatic features in the English Channel, Celtic Sea and Bay of Biscay. Marine Ecology Progress Series, 200, 93-102.
11. Beaugrand, G., Reid, P. C., Ibañez, F., Lindley, J. A., & Edwards, M. (2002a). Reorganisation of North Atlantic marine copepod biodiversity and climate. Science, 296, 1692-1694.
12. Beaugrand, G., Reid, P. C., Ibañez, F., & Planque, P. (2000a). Biodiversity of North Atlantic and North Sea calanoid copepods. Marine Ecology Progress Series, 204, 299-303.
13. Becker, G., & Dooley, H. (1995). The 1989/91 high salinity anomaly. Ocean Challenge, 6, 52-57.
14. Cassie, R. M. (1963). Multivariate analysis in the interpretation of numerical plankton data. New Zealand Journal of Science, 6, 36-58.
15. Clifford, H. T., & Goodall, D. W. (1967). A numerical contribution to the classification of the Poaceae. Australian Journal of Botanics, 15, 499-519.
16. Colebrook, J. M. (1964). Continuous Plankton Records: a principal component analysis of the geographical distribution of zooplankton. Bulletins of Marine Ecology, 6, 78-100.
17. Colebrook, J. M. (1969). Variability in plankton. Progress in Oceanography, 5, 115-125.
18. Colebrook, J. M. (1978). Continuous Plankton Records: zooplankton and environment, north-east Atlantic and North Sea, 1948-1975. Oceanologica Acta, 1, 9-23.
19. Colebrook, J. M. (1979). Continuous Plankton Records: seasonal cycles of phytoplankton and copepods in the North Atlantic Ocean and the North Sea. Marine Biology, 51, 23-32.
20. Colebrook, J. M. (1981). Continuous Plankton Records: persistence in time-series of annual means of abundance of zooplankton. Marine Biology, 61, 143-149.
21. Colebrook, J. M. (1982a). Continuous plankton records: phytoplankton, zooplankton and environment, North-East Atlantic and North Sea, 1958-1980. Oceanologica Acta, 5, 473-480.
22. Colebrook, J. M. (1982b). Continuous Plankton Records: persistence in time-series and the population dynamics of Pseudocalanus elongatus and Acartia clausi. Marine Biology, 66, 289-294.
23. Colebrook, J. M. (1984). Continuous Plankton Records: relationships between species of phytoplankton and zooplankton in the seasonal cycle. Marine Biology, 83, 313-323.
24. Colebrook, J. M. (1985a). Continuous Plankton Records: overwintering and annual fluctuations in the abundance of zooplankton. Marine Biology, 84, 261-265.
25. Colebrook, J. M. (1985b). Sea surface temperature and zooplankton, North Sea, 1948 to 1983. Journal du Conseil. Conseil International pour l'Exploration de la Mer, 42, 179-185.
26. Colebrook, J. M. (1986). Environmental influences on long-term variability in marine plankton. Hydrobiologia, 142, 309-325.
27. Colebrook, J. M. (1991). Continuous Plankton Records: from seasons to decades in the plankton of the North-East Atlantic. In T. Kawasaki, S. Tanaka, Y. Toba, & A. Taniguchi (Eds.), Long-term variability of pelagic fish population and their environments (pp. 29-45). Oxford: Pergamon Press.
28. Colebrook, J. M., Glover, R. S., & Robinson, G. A. (1961a). Contribution towards a plankton atlas of the North-Eastern Atlantic and the North Sea. General introduction. Bulletins of Marine Ecology, 5, 67-80.
29. Colebrook, J. M., John, D. E., & Brown, W. W. (1961b). Contribution towards a plankton atlas of the North-Eastern Atlantic and the North Sea. Part II: Copepoda. Bulletins of Marine Ecology, 5, 90-97.
30. Colebrook, J. M., & Robinson, G. A. (1964). Continuous Plankton Records: annual variations of abundance of plankton, 1948-1960. Bulletins of Marine Ecology, 6, 52-69.
31. Colebrook, J. M., & Taylor, A. H. (1984). Significant time scales of long-term variability in the plankton and the environment. Rapport et Procès-verbaux des réunions. Conseil International pour l'Exploration de la Mer, 183, 20-26.
32. Dickson, R. R., Meincke, J., Malmberg, S. A., & Lee, A. J. (1988). The 'Great Salinity Anomaly' in the northern North Atlantic, 1968-1982. Progress in Oceanography, 20, 103-151.
33. Diggle, P. J. (1990). Time series: a biostatistical introduction. Oxford: Clarendon Press.
34. Dufrêne, M., & Legendre, P. (1997). Species assemblages and indicator species: the need for a flexible asymetrical approach. Ecological Monographs, 67, 345-366.
35. Edinburgh Oceanographic Laboratory (1973). Continuous plankton records: A plankton atlas of the North Atlantic and the North Sea. Bulletins of Marine Ecology, 7, 1-174.
36. Edwards, M. (2000). Large-scale temporal and spatial patterns of marine phytoplankton and climate variability in the North Atlantic. Ph.D. Thesis, Plymouth University, England.
37. Edwards, M., Beaugrand, G., Reid, P. C., Rowden, A. A., & Jones, M. B. (2002). Ocean climate anomalies and the ecology of the North Sea. Marine Ecology Progress Series, 239, 1-10.
38. Edwards, M., John, A. W. G., Hunt, H. G., & Lindley, J. A. (1999). Exceptional influx of oceanic species into the North Sea late 1997. Journal of the Marine Biological Association of the United Kingdom, 79, 737-739.
39. Edwards, M., John, A. W. G., Johns, D. G., & Reid, P. C. (2001a). Case history and persistence of the non-indigenous diatom Coscinodiscus wailesii in the north-east Atlantic. Journal of the Marine Biological Association of the United Kingdom, 81, 207-211.
40. Edwards, M., Reid, P. C., & Planque, B. (2001b). Long-term and regional variability of phytoplankton biomass in the northeast Atlantic (1960-1995). ICES Journal of Marine Science, 58, 39-49.
41. Fromentin, J. -M., & Planque, B. (1996). Calanus and environment in the eastern North Atlantic. II. Influence of the North Atlantic Oscillation on C. finmarchicus and C. helgolandicus. Marine Ecology Progress Series, 134, 111-118.
42. Glémarec, M. (1973). The benthic communities of the European North Atlantic continental shelf. Oceanography and Marine Biology Annual Review, 11, 263-289.
43. Glover, R. S. (1952). Continuous Plankton Records: the Euphausiacea of the north-eastern Atlantic and the North Sea. Hull Bulletins of Marine Ecology, 3, 185-214.
44. Glover, R. S. (1957). An ecological survey of the Scottish herring fishery. Part II: the planktonic environment of the herring. Bulletins of Marine Ecology, 5, 1-43.
45. Haury, L. R., & McGowan, J. A. (1998). Time-space scales in marine biogeography. Intergovernmental Oceanographic Commission Workshop Report, 142, 163-170.
46. Hays, G. C. (1995). Diel vertical migration behaviour of Calanus hyperboreus at temperate latitudes. Marine Ecology Progress Series, 127, 301-304.
47. Hays, G. C. (1996). Large-scale patterns of diel vertical migration in the North Atlantic. Deep-Sea Research I, 43, 1601-1615.
48. Hays, G. C., Proctor, C. A., John, A. W. G., & Warner, A. J. (1994). Interspecific differences in the diel vertical migration of marine copepods: the implications of size, color, and morphology. Limnology and Oceanography, 39, 1621-1629.
49. Hirst, A. G., & Batten, S. D. (1998). Long-term changes in the diel vertical migration behaviour of Calanus finmarchicus in the North Sea are unrelated to fish predation. Marine Ecology Progress Series, 171, 307-310.
50. Ibañez, F., & Dauvin, J. -C. (1988). Long-term changes (1977 to 1987) in a muddy fine sand Abra alba - Melinna palmata community from the western English Channel: multivariate time series analysis. Marine Ecology Progress Series, 49, 65-81.
51. Ibañez, F., & Etienne, M. (1991). Le filtrage des séries chronologiques par l'analyse en composantes principales de processus (ACPP). Journal de Recherche océanographique, 16, 27-33.
52. Ibañez, F., Fromentin, J. -M., & Castel, J. (1993). Application de la méthode des sommes cumulées à l'analyse des séries chronologiques en océanographie. Comptes Rendus de l'Académie des Sciences de Paris, Sciences de la Vie, 316, 745-748.
53. Jolliffe, I. T. (1986). Principal Component Analysis. New York: Springer-Verlag New York Inc.
54. Kruskal, J. B. (1964). Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Psychometrika, 29, 1-27.
55. Lam, N. S. N. (1983). Spatial interpolation methods: a review. American Cartography, 10, 129-149.
56. Lance, G. N., & Williams, W. T. (1967). A general theory of classificatory sorting strategies. I. Hierarchical systems. Computer Journal, 9, 373-380.
57. Legendre, P., & Legendre, L. (1983). Echantillonnage et traitement des données. In S. Frontier (Ed.), Stratégies d'é chantillonnage en écologie (pp. 163-216). Paris: Masson.
58. Legendre, P., & Legendre, L. (1998). Numerical Ecology. (2nd ed.). Amsterdam: Elsevier Science B.V.
59. Levin, S. A. (1992). The problem of pattern and scale in ecology. Ecology, 73, 1943-1967.
60. Lindley, J. A. (1987). Continuous Plankton Records: the geographical distribution and seasonal cycles of Decapod Crustacean larvae and pelagic post-larvae in the north-eastern Atlantic Ocean and the North Sea, 1981-3. Journal of the Marine Biological Association of the United Kingdom, 67, 145-167.
61. Lindley, J. A. (1998). Diversity, biomass and production of decapod crustacean larvae in a changing environment. Invertebrate Reproduction and Development, 33, 209-219.
62. Lindley, J. A., Roskell, J., Warner, A. J., Halliday, N. C., Hunt, H. G., John, A. W. G., & Jonas, T. D. (1990). Doliolids in the German Bight in 1989: evidence for exceptional inflow into the North Sea. Journal of the Marine Biological Association of the United Kingdom, 70, 679-682.
63. Lindley, J. A., & Williams, R. (1994). Relating plankton assemblages to environmental variables using instruments towed by ships-of-opportunity. Marine Ecology Progress Series, 107, 245-262.
64. Longhurst, A. (1998). Ecological Geography of the Sea. London: Academic Press.
65. Lucas, C. E. (1940). Ecological investigations with the Continuous Plankton Recorder: the phytoplankton in the southern North Sea, 1932-1937. Hull Bulletins of Marine Ecology, 1, 73-170.
66. Lucas, C. E. (1941). Continuous plankton records: phytoplankton in the North Sea, 1938-39. Part 1. Diatoms. Hull Bulletins of Marine Ecology, 2, 19-46.
67. Lucas, C. E. (1942). Continuous plankton records: phytoplankton in the North Sea, 1938-39. Part II. - Dinoflagellates, Phaeocystis, etc. Hull Bulletins of Marine Ecology, 2, 47-70.
68. Lundberg, P., Ranta, E., Ripa, J., & Kaitala, V. (2000). Population variability in space and time. Trends in Ecology and Evolution, 15, 460-464.
69. Mann, K. H., & Lazier, J. R. N. (1996). Dynamics of marine ecosystems: biological-physical interactions in the oceans. (2nd ed.). Cambridge: Blackwell Science.
70. Planque, B. (1996). Spatial and temporal fluctuations in Calanus populations sampled by the Continuous Plankton Recorder. Ph.D. Thesis, Université Pierre et Marie Curie, Paris, France.
71. Planque, B., & Batten, S. D. (2000). Calanus finmarchicus in the North Atlantic: the year of Calanus in the context of interdecadal change. ICES Journal of Marine Science, 57, 1528-1535.
72. Planque, B., & Fromentin, J. -M. (1996). Calanus and environment in the eastern North Atlantic. I. Spatial and temporal patterns of C. finmarchicus and C. helgolandicus. Marine Ecology Progress Series, 134, 101-109.
73. Planque, B., Hays, G. C., Ibañez, F., & Gamble, J. C. (1997). Large scale spatial variations in the seasonal abundance of Calanus finmarchicus. Deep-Sea Research (1), 44, 315-326.
74. Planque, B., & Ibañez, F. (1997). Long-term time series in Calanus finmarchicus abundance - a question of space? Oceanologica Acta, 20, 159-164.
75. Rae, K. M., & Rees, C. B. (1947). Continuous plankton records: the Copepoda in the North Sea, 1938-1939. Hull Bulletins of Marine Ecology, 2, 95-132.
76. Rees, C. B. (1952). Continuous Plankton Records: the decapod larvae in the North Sea, 1947-1949. Hull Bulletins of Marine Ecology, 3, 157-184.
77. Reid, P. C., & Beaugrand, G. (2002). Interregional biological responses in the NorthAtlantic to hydrometeorological forcing. In K. Sherman, & H. -R. Skjoldal (Eds.), Changing states of the Large Marine Ecosystems of the North Atlantic (pp. 27-48). Amsterdam: Elsevier Science.
78. Reid, P. C., Edwards, M., Hunt, H. G., & Warner, A. J. (1998a). Phytoplankton change in the North Atlantic. Nature, 391, 546.
79. Reid, P. C., & Planque, B. (2000). Long-term planktonic variations and the climate of the North Atlantic. In D. Mills (Ed.), The ocean life of Atlantic salmon. Environmental and biological factors influencing survival (pp. 153-169). Bodmin: Fishing News Books.
80. Reid, P. C., Planque, B., & Edwards, M. (1998b). Is variability in the long-term results of the Continuous Plankton Recorder survey a response to climate change? Fisheries Oceanography, 7, 282-288.
81. Robinson, G. A. (1961). Contribution towards a plankton atlas of the North-Eastern Atlantic and the North Sea. Part I: phytoplankton. Bulletins of Marine Ecology, 5, 81-89.
82. Rothschild, B. J. (1998). Year class strengths of zooplankton in the North Sea and their relation to cod and herring abundance. Journal of Plankton Research, 20, 1721-1741.
83. Sen, Z. (1989). Cumulative semi-variogram models of regionalized variables. Mathematical Geology, 21, 891-903.
84. Shepard, R. N. (1962). The analysis of proximities: multidimensional scaling with an unknown distance function. Psychometrika, 27, 125-139.
85. Taylor, A. H., Colebrook, J. M., Stephens, J. A., & Baker, N. G. (1992). Latitudinal displacements of the Gulf Stream and the abundance of plankton in the North-East Atlantic. Journal of the Marine Biological Association of the United Kingdom, 72, 919-921.
86. Vautard, R., Yiou, P., & Ghil, M. (1992). Singular-spectrum analysis: a toolkit for short, noisy chaotic signals. Physica D, 58, 95-126.
87. Wackernagel, H. (1995). Multivariate geostatistics. An introduction with applications. Berlin: Springer-Verlag Berlin Heidelberg.
88. Williamson, M. H. (1961). An ecological survey of a Scottish herring fishery. Part IV: changes in the plankton during the period 1949 to 1959. Appendix: a method for studying the relation of plankton variations to hydrography. Bulletins of Marine Ecology, 5, 207-229.
89. Worthington, L. V. (1976). On the North Atlantic circulation. Oceanography studies, 6, 1-110.