Characteristics of the monocistronic genome of extra small virus, a virus-like particle associated with Macrobrachium rosenbergii nodavirus: Possible candidate for a new species of satellite virus

Journal of General Virology

Volumn 85, Issue 3, 2004, Pages 643-646

  Sri Widada, Joannes ^a   Bonami, Jean Robert ^a  

^a CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

FRESH WATER; NUCLEOTIDE; RNA POLYMERASE; SINGLE STRANDED DNA; STRUCTURAL PROTEIN; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; DEATH; DEFECTIVE VIRUS; FRESHWATER ENVIRONMENT; GENOME ANALYSIS; HYPOTHESIS; NODAVIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PALAEMONIDAE; PARTICLE SIZE; PLANT; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; VIRUS CAPSID; VIRUS GENOME; VIRUS INFECTION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; GENES, VIRAL; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; NODAVIRIDAE; PALAEMONIDAE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; VIRAL STRUCTURAL PROTEINS;

MACROBRACHIUM; MACROBRACHIUM ROSENBERGII; MACROBRACHIUM ROSENBERGII NODAVIRUS; NODAVIRIDAE; SATELLITE VIRUSES;

EID: 1642295778     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.79777-0     Document Type: Article

References (13)

1. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
2. Arcier, J. M., Herman, F., Lightner, D. V., Redman, R. M., Mari, J. & Bonami, J. R. (1999). A viral disease associated with mortalities in hatchery-reared postlarvae of the giant freshwater prawn Macrobrachium rosenbergii. Dis Aquat Org 38, 177-181.
3. Ban, N., Larson, S. B. & McPherson, A. (1995). Structural comparison of the plant satellite viruses. Virology 214, 571-583.
4. Corpet, F. (1988). Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16, 10881-10890.
5. Kozak, M. (1987). An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 15, 8125-8148.
6. Mayo, M. A., Fritsch, C., Leibowitz, M. J., Palukaitis, P., Scholthof, K.-B. G., Simons, A. E. & Taliansky, M. (2000). Satellite viruses. In Virus Taxonomy. Seventh Report of the International Committee on Taxonomy of Viruses, pp. 1026-1032. Edited by M. H. V. Van Regenmortel, C. M. Fauquet, D. H. L. Bishop, E. B. Carstens, M. K. Estes, S. M. Lemon, J. Malonoff, M. A. Mayo, D. J. McGeoch, C. R. Pringle & R. B. Wickner. San Diego: Academic Press.
7. Overton, H. A., Buck, K. W., Nailey, L. & Ball, B. V. (1982). Relationship between the RNA components of chronic bee-paralysis virus and those of chronic bee-paralysis virus associate. J Gen Virol 63, 171-179.
8. Qian, D., Shi, Z., Zhang, S., Cao, Z., Liu, W., Li, L., Xie, Y., Cambournac, I. & Bonami, J. R. (2003). Extra small virus-like particles (XSV) and nodavirus associated with whitish muscle disease in the giant fresh water prawn Macrobrachium rosenbergii. J Fish Dis 26, 521-527.
9. Qiu, W. & Scholthof, K. B. G. (2000). In vitro- and in vivo-generated defective RNAs of satellite panicum mosaic virus define cis-acting RNA elements required for replication and movement. J Virol 74, 2247-2254.
10. Qiu, W. & Scholthof, K. B. G. (2001). Genetic identification of multiple biological roles associated with the capsid protein of satellite panicum moisaic virus. Mol Plant Microbe Interact 14, 21-30.
11. Romestand, B. & Bonami, J. R. (2003). A sandwich enzyme linked immunosorbed assay (S. ELISA) for detection of MrNV in the giant freshwater prawn Macrobrachium rosenbergii. J Fish Dis 26, 71-75.
12. Tung, C. W., Wang, C. S. & Chen, S. N. (1999). Histological and electron microscopy study on Macrobrachium muscle virus (MMV) infection in the giant freshwater prawn, Macrobrachium rosenbergii (de Man), cultured in Taiwan. J Fish Dis 22, 1-5.
13. Zhang, L., Zitter, T. A. & Palukaitis, P. (1991). Helper virus-dependent replication, nucleotide sequence and genome organization of the satellite virus of maize white line mosaic virus. Virology 180, 467-473.