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International Journal of Biological Macromolecules

Volumn 35, Issue 3-4, 2005, Pages 211-220

Importance of main-chain hydrophobic free energy to the stability of thermophilic proteins

(3) Saraboji, K a Gromiha, M Michael b Ponnuswamy, M N a

a UNIVERSITY OF MADRAS (India)

b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST (Japan)

Author keywords

Hydrophobic free energy; Protein stability; Three dimensional structure

Indexed keywords

CARBON; DISULFIDE; HYDROGEN; NITROGEN; PROTEIN;

ARTICLE; ATOM; DISULFIDE BOND; ELECTRICITY; ENERGY; HYDROGEN BOND; HYDROPHOBICITY; MOLECULAR INTERACTION; PROTEIN ANALYSIS; PROTEIN FAMILY; PROTEIN STABILITY; PROTEIN STRUCTURE; SEQUENCE HOMOLOGY; THERMOSTABILITY;

EID: 16244421734 PISSN: 01418130 EISSN: None Source Type: Journal
DOI: 10.1016/j.ijbiomac.2005.02.003 Document Type: Article

Times cited : (28)

References (45)

1
- 0037172796
- S. Chakravarty, and R. Varadarajan Biochemistry 41 2002 8152
- (2002) Biochemistry , vol.41 , pp. 8152
- Chakravarty, S.¹ Varadarajan, R.²

2
- 0016771835
- M. Perutz, and H. Radidt Nature 255 1975 256
- (1975) Nature , vol.255 , pp. 256
- Perutz, M.¹ Radidt, H.²

3
- 0018788367
- P. Argos, M. Rossmann, U. Grau, H. Zuber, G. Frank, and J. Tratschin Biochemistry 25 1979 5698
- (1979) Biochemistry , vol.25 , pp. 5698
- Argos, P.¹ Rossmann, M.² Grau, U.³ Zuber, H.⁴ Frank, G.⁵ Tratschin, J.⁶

4
- 0029932580
- E. Querol, J.A. Perez-Pons, and A. Mozo-Villarias Protein Eng. 9 1996 265
- (1996) Protein Eng. , vol.9 , pp. 265
- Querol, E.¹ Perez-Pons, J.A.² Mozo-Villarias, A.³

5
- 0034623981
- M.A. Arnott, R.A. Michael, C.R. Thompson, D.W. Hough, and M.J. Danson J. Mol. Biol. 304 2000 657
- (2000) J. Mol. Biol. , vol.304 , pp. 657
- Arnott, M.A.¹ Michael, R.A.² Thompson, C.R.³ Hough, D.W.⁴ Danson, M.J.⁵

6
- 0034692902
- J. Chen, Z. Lu, J. Sakon, and W.E. Stites J. Mol. Biol. 303 2000 125
- (2000) J. Mol. Biol. , vol.303 , pp. 125
- Chen, J.¹ Lu, Z.² Sakon, J.³ Stites, W.E.⁴

7
- 0034531995
- J. Hasegawa, S. Uchiyama, Y. Tanimoto, M. Mizutani, Y. Kobayashi, Y. Sambongi, and Y. Igarashi J. Biol. Chem. 275 2000 37824
- (2000) J. Biol. Chem. , vol.275 , pp. 37824
- Hasegawa, J.¹ Uchiyama, S.² Tanimoto, Y.³ Mizutani, M.⁴ Kobayashi, Y.⁵ Sambongi, Y.⁶ Igarashi, Y.⁷

8
- 0037188384
- R.R. Biekofsky, S.R. Martin, J.E. McCormick, L. Masino, S. Fefeu, P.M. Bayley, and J. Feeney Biochemistry 41 2002 6850
- (2002) Biochemistry , vol.41 , pp. 6850
- Biekofsky, R.R.¹ Martin, S.R.² McCormick, J.E.³ Masino, L.⁴ Fefeu, S.⁵ Bayley, P.M.⁶ Feeney, J.⁷

9
- 0037238047
- H. Takeshita, T. Yasuda, T. Nakajima, K. Mogi, Y. Kaneko, R. Iida, and K. Kishi Eur. J. Biochem. 270 2003 307
- (2003) Eur. J. Biochem. , vol.270 , pp. 307
- Takeshita, H.¹ Yasuda, T.² Nakajima, T.³ Mogi, K.⁴ Kaneko, Y.⁵ Iida, R.⁶ Kishi, K.⁷

10
- 0035876479
- S. Fukuchi, and K. Nishikawa J. Mol. Biol. 309 2001 835
- (2001) J. Mol. Biol. , vol.309 , pp. 835
- Fukuchi, S.¹ Nishikawa, K.²

11
- 0025327584
- M. Akke, and S. Forsen Proteins 8 1990 23
- (1990) Proteins , vol.8 , pp. 23
- Akke, M.¹ Forsen, S.²

12
- 0031686238
- A.M. Facchiano, G. Colonna, and R. Ragone Protein Eng. 11 1998 753
- (1998) Protein Eng. , vol.11 , pp. 753
- Facchiano, A.M.¹ Colonna, G.² Ragone, R.³

13
- 0032863182
- M.M. Gromiha, M. Oobatake, H. Kono, H. Uedaira, and A. Sarai J. Prot. Chem. 18 1999 565
- (1999) J. Prot. Chem. , vol.18 , pp. 565
- Gromiha, M.M.¹ Oobatake, M.² Kono, H.³ Uedaira, H.⁴ Sarai, A.⁵

14
- 0025370815
- K.A. Dill Biochemistry 29 1990 7133
- (1990) Biochemistry , vol.29 , pp. 7133
- Dill, K.A.¹

15
- 0027256739
- G.D. Rose, and R. Wolfenden Ann. Rev. Biophys. Biomol. Struct. 22 1993 381
- (1993) Ann. Rev. Biophys. Biomol. Struct. , vol.22 , pp. 381
- Rose, G.D.¹ Wolfenden, R.²

16
- 0030059689
- C.N. Pace, B.A. Shirely, M.A. McNutt, and K. Gajiwala FASEB J. 10 1996 75
- (1996) FASEB J. , vol.10 , pp. 75
- Pace, C.N.¹ Shirely, B.A.² McNutt, M.A.³ Gajiwala, K.⁴

17
- 0032715527
- M.M. Gromiha, M. Oobatake, and A. Sari Biophys. Chem. 82 1999 51
- (1999) Biophys. Chem. , vol.82 , pp. 51
- Gromiha, M.M.¹ Oobatake, M.² Sari, A.³

18
- 0034531995
- J. Hasegawa, S. Uchiyama, Y. Tanimoto, M. Mizutani, Y. Kobayashi, Y. Sambongi, and Y. Igarashi J. Biol. Chem. 275 2000 37824
- (2000) J. Biol. Chem. , vol.275 , pp. 37824
- Hasegawa, J.¹ Uchiyama, S.² Tanimoto, Y.³ Mizutani, M.⁴ Kobayashi, Y.⁵ Sambongi, Y.⁶ Igarashi, Y.⁷

19
- 0039116206
- A. Szilagyi, and P. Zavodsky Struct. Fold Des. 8 2000 493
- (2000) Struct. Fold Des. , vol.8 , pp. 493
- Szilagyi, A.¹ Zavodsky, P.²

20
- 0031580199
- G. Vogt, S. Woell, and P. Argos J. Mol. Biol. 269 1997 631
- (1997) J. Mol. Biol. , vol.269 , pp. 631
- Vogt, G.¹ Woell, S.² Argos, P.³

21
- 0034017055
- S. Kumar, C.J. Tsai, and R. Nussinov Protein Eng. 13 2000 179
- (2000) Protein Eng. , vol.13 , pp. 179
- Kumar, S.¹ Tsai, C.J.² Nussinov, R.³

22
- 0035371061
- S. Kumar, and R. Nussinov Proteins 43 2001 433
- (2001) Proteins , vol.43 , pp. 433
- Kumar, S.¹ Nussinov, R.²

23
- 0035876847
- M.M. Gromiha Biophys. Chem. 91 2001 71
- (2001) Biophys. Chem. , vol.91 , pp. 71
- Gromiha, M.M.¹

24
- 0028325958
- P.K. Ponnuswamy, and M.M. Gromiha J. Theor. Biol. 166 1994 63
- (1994) J. Theor. Biol. , vol.166 , pp. 63
- Ponnuswamy, P.K.¹ Gromiha, M.M.²

25
- 0042433116
- J.K. Yano, and T.L. Poulos Curr. Opin. Biotechnol. 14 2003 360
- (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 360
- Yano, J.K.¹ Poulos, T.L.²

26
- 0036425552
- M.M. Gromiha, S. Thomas, and C. Santhosh Prep. Biochem. Biotechnol. 32 2002 355
- (2002) Prep. Biochem. Biotechnol. , vol.32 , pp. 355
- Gromiha, M.M.¹ Thomas, S.² Santhosh, C.³

27
- 0037236096
- A. Paiardini, G. Gianese, F. Bossa, and S. Pascarella Proteins 50 2003 122
- (2003) Proteins , vol.50 , pp. 122
- Paiardini, A.¹ Gianese, G.² Bossa, F.³ Pascarella, S.⁴

28
- 0033954256
- H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, and P.E. Bourne Nucleic Acids Res. 28 2000 235
- (2000) Nucleic Acids Res. , vol.28 , pp. 235
- Berman, H.M.¹ Westbrook, J.² Feng, Z.³ Gilliland, G.⁴ Bhat, T.N.⁵ Weissig, H.⁶ Shindyalov, I.N.⁷ Bourne, P.E.⁸

29
- 0141828152
- E.A. Gaucher, J.M. Thomson, M.F. Burgan, and S.A. Benner Nature 425 2003 285
- (2003) Nature , vol.425 , pp. 285
- Gaucher, E.A.¹ Thomson, J.M.² Burgan, M.F.³ Benner, S.A.⁴

30
- 0022596727
- D. Eisenberg, and A.D. Mc Lachlan Nature 319 1986 199
- (1986) Nature , vol.319 , pp. 199
- Eisenberg, D.¹ Mc Lachlan, A.D.²

31
- 0000152788
- D. Eisenberg, M. Wesson, and M. Yamashita Chem. Scr. 29A 1989 217
- (1989) Chem. Scr. , vol.29 , pp. 217
- Eisenberg, D.¹ Wesson, M.² Yamashita, M.³

32
- 85030802891
- 'NACCESS', Computer Program, Department of Biochemistry and Molecular Biology, University College, London
- S.J. Hubbard, J.M. Thornton, 'NACCESS', Computer Program, Department of Biochemistry and Molecular Biology, University College, London, 1993, available from: http://wolf.bi.umist.ac.uk/unix/naccess.html.
- (1993)
- Hubbard, S.J.¹ Thornton, J.M.²

33
- 0015866154
- A. Shrake, and J. Rupley J. Mol. Biol. 79 1973 351
- (1973) J. Mol. Biol. , vol.79 , pp. 351
- Shrake, A.¹ Rupley, J.²

34
- 0021112481
- D.J. Barlow, and J.M. Thornton J. Mol. Biol. 168 1983 867
- (1983) J. Mol. Biol. , vol.168 , pp. 867
- Barlow, D.J.¹ Thornton, J.M.²

35
- 0017848335
- L.R. Brown, A. DeMarco, R. Richarz, G. Wagner, and K. Wuthrich Eur. J. Biochem. 88 1978 87
- (1978) Eur. J. Biochem. , vol.88 , pp. 87
- Brown, L.R.¹ Demarco, A.² Richarz, R.³ Wagner, G.⁴ Wuthrich, K.⁵

36
- 0015505502
- A.R. Fersht J. Mol. Biol. 64 1972 497
- (1972) J. Mol. Biol. , vol.64 , pp. 497
- Fersht, A.R.¹

37
- 0024273441
- H. Nicholson, W.J. Becktel, and B.W. Matthews Nature 336 1988 651
- (1988) Nature , vol.336 , pp. 651
- Nicholson, H.¹ Becktel, W.J.² Matthews, B.W.³

38
- 0023726958
- D. Sali, M. Bycroft, and A.R. Fersht Nature 335 1988 740
- (1988) Nature , vol.335 , pp. 740
- Sali, D.¹ Bycroft, M.² Fersht, A.R.³

39
- 0028304962
- I.K. Mc Donald, and J.M. Thornton J. Mol. Biol. 238 1994 777
- (1994) J. Mol. Biol. , vol.238 , pp. 777
- Mc Donald, I.K.¹ Thornton, J.M.²

40
- 85030799529
- I.K. Mc Donald HBPLUS, London, UCL, 1992.
- I.K. Mc Donald HBPLUS, London, UCL, 1992.

41
- 16244393930
- E. Baker, and R. Hubbard Prog. Biophys. Mol. Biol. 25 1994 97
- (1994) Prog. Biophys. Mol. Biol. , vol.25 , pp. 97
- Baker, E.¹ Hubbard, R.²

42
- 6244250502
- A. Ben-Naim J. Phys. Chem. 95 1991 1437
- (1991) J. Phys. Chem. , vol.95 , pp. 1437
- Ben-Naim, A.¹

43
- 0019881763
- J.M. Thornton J. Mol. Biol. 151 1981 261
- (1981) J. Mol. Biol. , vol.151 , pp. 261
- Thornton, J.M.¹

44
- 0029011701
- W.D. Cornell, P. Cieplak, C.I. Bayly, I.R. Gould, K.M. Merz, D.C. Ferguson, T. Spellmeyer, J.W. Fox, Caldwell, and P.A. Kollman J. Am. Chem. Soc. 117 1995 5179
- (1995) J. Am. Chem. Soc. , vol.117 , pp. 5179
- Cornell, W.D.¹ Cieplak, P.² Bayly, C.I.³ Gould, I.R.⁴ Merz, K.M.⁵ Ferguson, D.C.⁶ Spellmeyer, T.⁷ Fox, J.W.⁸ Caldwell⁹ Kollman, P.A.¹⁰

45
- 0033603392
- L. Xiao, and B. Honig J. Mol. Biol. 289 1999 1435
- (1999) J. Mol. Biol. , vol.289 , pp. 1435
- Xiao, L.¹ Honig, B.²

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