Indexed keywords
BAYESIAN APPROACHES;
COLOCATIONS;
DATA SET;
DNA SEQUENCE DATA;
EXPRESSION DATA;
EXPRESSION PROFILE;
GENE MODEL;
GENE STRUCTURE;
GENERATIVE MODEL;
GENOME SEQUENCES;
LOCAL MINIMUMS;
PARAMETERIZING;
STATISTICAL SIGNIFICANCE;
BAYESIAN NETWORKS;
DNA SEQUENCES;
LEARNING ALGORITHMS;
POLYMERASE CHAIN REACTION;
TISSUE;
GENE EXPRESSION;
ANIMAL;
ARTICLE;
BIOLOGICAL MODEL;
BIOLOGY;
COMPUTER PROGRAM;
DNA MICROARRAY;
GENOMICS;
METHODOLOGY;
MOUSE;
NUCLEIC ACID DATABASE;
PROBABILITY;
ANIMALS;
COMPUTATIONAL BIOLOGY;
DATABASES, NUCLEIC ACID;
GENOMICS;
MICE;
MODELS, GENETIC;
OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS;
PROBABILITY;
SOFTWARE;
2
84874755409
The functional landscape of mouse gene expression
Zhang W et al The functional landscape of mouse gene expression. Under review.
Under Review
Zhang, W.1
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Spatial bias removal in microarray images
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Univ. Toronto TR PSI-2003-21
Shai, O.1
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An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome
Epub 2003 Dec 22
Hild M et. al An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome. Genome Biol. 2003;5(1):R3. Epub 2003 Dec 22.
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Genome Biol.
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Hild, M.1
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Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer
Apr
Hughes TR et. al Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer. Nat. Biotechnol. 2001 Apr; 19(4): 342- 7.
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Nat. Biotechnol.
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Hughes, T.R.1
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Large-scale transcriptional activity in chromosomes 21 and 22
May 3
G. Kapranov P et. al. Large-scale transcriptional activity in chromosomes 21 and 22. Science 2002 May 3;296(5569):916-9.
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Science
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Kapranov, G.P.1
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Gene expression analysis using oligonucleotide arrays produced by maskless photolithography
Nov
Nuwaysir EF et. al Gene expression analysis using oligonucleotide arrays produced by maskless photolithography. Gen. Res. 2002 Nov; 12(11):1749-55.
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Gen. Res.
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Nuwaysir, E.F.1
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RIKEN genome exploration research group phase 1 II team
FANTOM Consortium, Analysis of the mouse transcriptoine based on functional annotation of 60, 770 full-length cDNAs. Dec 5
FANTOM Consortium: RIKEN Genome Exploration Research Group Phase 1 II Team. Analysis of the mouse transcriptoine based on functional annotation of 60, 770 full-length cDNAs. Okazaki Y et. al. Nature. 2002 Dec 5;420(6915):563-73.
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Nature
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Okazaki, Y.1
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BLAT-The BLAST-like alignment tool
Apr
Kent WJ. BLAT-the BLAST-like alignment tool. Genome Res. 2002 Apr;12(4):656-64.
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Genome Res.
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Kent, W.J.1
10
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Mining the human genome using microarrays of open reading frames
Nov
Pen SG et al. Mining the human genome using microarrays of open reading frames. Nat. Genet. 2000 Nov;26(3):315-8.
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Nat. Genet.
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Pen, S.G.1
11
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The transcriptional activity of human chromosome 22
Feb 15
Rinn JL et al. The transcriptional activity of human chromosome 22. Genes Dev. 2003 Feb 15;17(4):529-40.
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Genes Dev.
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Rinn, J.L.1
12
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Experimental annotation of the human genome using microarray technology
Feb 15
Shoemaker DD et al. Experimental annotation of the human genome using microarray technology. Nature 2001 Feb 15;409(6822):922-7.
(2001)
Nature
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Shoemaker, D.D.1
13
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Empirical analysis of transcriptional activity in the arabidopsis genome
October 31
Yamada K et al. Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome. Science 2003 October 31;302:842-6.
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Science
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Yamada, K.1
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Genome-wide discovery of transcriptional modules from DNA sequence and gene expression
Segal E et al. Genome-wide discovery of transcriptional modules from DNA sequence and gene expression. Bioinformatics 19:273-82, 2003.
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Bioinformatics
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Segal, E.1
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Variance stabilization applied to microarray data calibration and to quantification of differential expression
Huber W et al. Variance stabilization applied to microarray data calibration and to quantification of differential expression. Bioinformatics 18:S9G-S104, 2002.
(2002)
Bioinformatics
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Huber, W.1
16
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Maximum likelihood from incomplete data via the EM algorithm
Dempster AP et al. Maximum likelihood from incomplete data via the EM algorithm. Proc. Royal Stat. Soc. B-39:1-38, 1977.
(1977)
Proc. Royal Stat. Soc.
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Dempster, A.P.1
17
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Factor graphs and the sum-product algorithm
February
Kschischang FR et al Factor graphs and the sum-product algorithm. IEEE Trans. Infor. Theory 47(2):498-519, February 2001.
(2001)
IEEE Trans. Infor. Theory
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Kschischang, F.R.1
18
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Extending factor graphs so as to unify directed and undirected graphical models
August
Frey BJ. Extending factor graphs so as to unify directed and undirected graphical models. Proc. UAI 2003 August.
(2003)
Proc. UAI
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