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Volumn 18, Issue SUPPL. 2, 2002, Pages

A new distance measure for comparing sequence profiles based on path lengths along an entropy surface

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; CAENORHABDITIS ELEGANS; COMPARATIVE STUDY; CONFERENCE PAPER; DNA SEQUENCE; ENTROPY; GENE SEQUENCE; GENOMICS; NONHUMAN; PRIORITY JOURNAL;

EID: 15944362844     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.suppl_2.S44     Document Type: Conference Paper
Times cited : (15)

References (30)
  • 4
    • 0030806210 scopus 로고    scopus 로고
    • Sequence alignment with tandem duplication
    • Benson,G. (1997) Sequence alignment with tandem duplication. J. Comp ut. Biol., 4, 351-367.
    • (1997) J. Comp Ut. Biol. , vol.4 , pp. 351-367
    • Benson, G.1
  • 5
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson,G. (1999) Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res., 27, 573-580.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 573-580
    • Benson, G.1
  • 6
    • 84956985076 scopus 로고    scopus 로고
    • Tandem cyclic alignment
    • Amir,A. and Landau,G. (eds), Lecture Notes in Computer Science, 2089, Springer
    • Benson,G. (2000) Tandem cyclic alignment. In Amir,A. and Landau,G. (eds), Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching, Lecture Notes in Computer Science, 2089, Springer, pp. 118-130.
    • (2000) Proceedings of the 12th Annual Symposium on Combinatorial Pattern Matching , pp. 118-130
    • Benson, G.1
  • 8
    • 34147120474 scopus 로고
    • A note on two problems in connexion with graphs
    • Dijkstra,E.W. (1959) A note on two problems in connexion with graphs. Numerische Mathematik, 1, 269-271.
    • (1959) Numerische Mathematik , vol.1 , pp. 269-271
    • Dijkstra, E.W.1
  • 9
    • 0002619979 scopus 로고
    • Reconstruction of evolutionary trees
    • Heywood,V. and McNeill,J. (eds), Systematics Association, London
    • Edwards,A. and Cavalli-Sforza,C. (1964) Reconstruction of evolutionary trees. In Heywood,V. and McNeill,J. (eds), Phenetic and Phylogenetic Classification. Systematics Association, London.
    • (1964) Phenetic and Phylogenetic Classification
    • Edwards, A.1    Cavalli-Sforza, C.2
  • 13
    • 0027480960 scopus 로고
    • A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes
    • Huntington's disease collaborative research group (1993) A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes. Cell, 72, 971-983.
    • (1993) Cell , vol.72 , pp. 971-983
  • 15
    • 0034020175 scopus 로고    scopus 로고
    • Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis
    • Keim,P., Price,L., Klevytska,A., Smith,K., Schupp,J., Okinaka,R., Jackson,P. and Hugh-Jones,M. (2000) Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis. J. Bacteriol., 182, 2928-2936.
    • (2000) J. Bacteriol. , vol.182 , pp. 2928-2936
    • Keim, P.1    Price, L.2    Klevytska, A.3    Smith, K.4    Schupp, J.5    Okinaka, R.6    Jackson, P.7    Hugh-Jones, M.8
  • 18
    • 0025952277 scopus 로고
    • Divergence measures based on the Shannon entropy
    • Lin, J. (1991) Divergence measures based on the Shannon entropy. IEEE Trans. Inf. Theor., 37, 145-151.
    • (1991) IEEE Trans. Inf. Theor. , vol.37 , pp. 145-151
    • Lin, J.1
  • 20
    • 0025437146 scopus 로고
    • On a cyclic string-to-string correction problem
    • Maes,M. (1990) On a cyclic string-to-string correction problem. Information Processing Letters, 35, 73-78.
    • (1990) Information Processing Letters , vol.35 , pp. 73-78
    • Maes, M.1
  • 21
    • 0020965531 scopus 로고
    • Accuracy of estimated phylogenetic trees from molecular data: II. Gene frequency data
    • Nei,M., Tajima,F. and Tateno,Y. (1983) Accuracy of estimated phylogenetic trees from molecular data: II. gene frequency data. J. Mol. Ecol., 19, 153-170.
    • (1983) J. Mol. Ecol. , vol.19 , pp. 153-170
    • Nei, M.1    Tajima, F.2    Tateno, Y.3
  • 22
    • 0027333071 scopus 로고
    • Localization of a type 1 diabetes susceptibility locus to the variable tandem repeat region flanking the insulin gene
    • Owerbach,D. and Gabbay,K. (1993) Localization of a type 1 diabetes susceptibility locus to the variable tandem repeat region flanking the insulin gene. Diabetes, 42, 1708-1714.
    • (1993) Diabetes , vol.42 , pp. 1708-1714
    • Owerbach, D.1    Gabbay, K.2
  • 24
    • 0023375195 scopus 로고
    • The Neighbor-Joining method: A new method for reconstructing phylogenetic trees
    • Saitou,N. and Nei,M. (1987) The Neighbor-Joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 84944032270 scopus 로고
    • Generating random points in triangles
    • Glassner,A.S. (ed.), Morgan Kaufmann
    • Turk,G. (1990) Generating random points in triangles. In Glassner,A.S. (ed.), Graphics Gems I. Morgan Kaufmann.
    • (1990) Graphics Gems I
    • Turk, G.1
  • 29
    • 0027570680 scopus 로고
    • A multiple sequence comparison method
    • Wong,A., Chan,S. and Chiu,D. (1993) A multiple sequence comparison method. Bull. Math. Biol., 55, 465-486.
    • (1993) Bull. Math. Biol. , vol.55 , pp. 465-486
    • Wong, A.1    Chan, S.2    Chiu, D.3
  • 30
    • 0036307493 scopus 로고    scopus 로고
    • Within the twilight zone: A sensitive profile-profile comparison tool based on information theory
    • Yona,G. and Levitt,M. (2002) Within the twilight zone: a sensitive profile-profile comparison tool based on information theory. J. Mol. Biol., 315, 1257-1275.
    • (2002) J. Mol. Biol. , vol.315 , pp. 1257-1275
    • Yona, G.1    Levitt, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.