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note
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Formalin-fixed paraffin sections (3 μm thick) were used (23). For enzyme immunohistochemistry, rabbit polyclonal antibody against human KIT (K963; IBL, Fujioka, Japan) and mouse monoclonal antibody (mAb) against human CD34 (QBend10; Novocastra laboratories, Newcastle, UK) were used as the primary antibodies. Biotinylated goat antibody to rabbit (anti-rabbit) immunoglobulin G (IgG) and biotinylated rabbit anti-mouse IgG (DAKO; Glostrup, Denmark) were used as the secondary antibodies. Binding of the secondary antibodies was visualized as in (23). Coexpression of KIT and CD34 was confirmed with a confocal laser scanning microscope (Olympus LSM-GB200; Olympus, Tokyo, Japan). Fluorescein isothiocyanate (FITC)-conjugated swine anti-rabbit IgG and R-phycoerythrin (RPE)-conjugated goat anti-mouse IgG (DAKO) were used as the secondary antibodies. The excitation wavelength is 488 nm for FITC and 515 nm for RPE.
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21
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15644377781
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15644372426
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note
-
From 10 μg of total RNA, cDNA was synthesized and amplified as in (24). Oligonucleotide primer sets used were as described (5). The cDNAs were sequenced directly or after subcloning into Bluescript I KS(-) by Model 373A DNA sequencer (Applied Biosystems, Foster City, CA).
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33
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15644370620
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note
-
The coding region of the human wild-type c-kit was cloned into Xba I site of expression vector pEF-BOS. The Sna BI-Mro I fragment (nucleotide 1141 to 2282) of the human wild-type c-kit in the expression vector was replaced by the corresponding fragments of the mutant-type cDNA obtained from each GIST. The expression vectors were transfected into the 293T HEK cell line by calcium phosphate precipitation (5).
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34
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15644370961
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note
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The procedures of cell lysis, immunoprecipitation, SDS-polyacrylamide gel electrophoresis, and immunoblotting were done as in (5). Mouse mAb to human KIT (MCA955; Serotec, Oxford, UK) was used for the immunoprecipitation. Immunoblotting was done with mouse mAb to phosphotyrosine (4G10; Upstate Biotechnology, Lake Placid, NY) or rabbit polyclonal anti-human KIT (K963).
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-
-
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35
-
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15644366164
-
-
note
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The immune complex kinase assay was done as in (5). Rabbit polyclonal anti-human KIT (K963) was used for the immunoprecipitation.
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-
-
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36
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15644366037
-
-
note
-
To generate the murine-type c-kit cDNAs containing the same mutation as the GISTs, we performed site-directed mutagenesis (5). The Nde I-SpI I fragment with the mutation was isolated and inserted into the expression vector pEF-BOS containing murine wild-type c-kit cDNA.
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37
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15644363216
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note
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A Sea I-cut expression vector pEF-BOS containing the mouse-type mutated c-kit cDNA and the Bam HI-cut expression vector pSV2-neo were cotransfected into the IL-3-dependent Ba/F3 murine lymphoid cell line with the use of GENE PULSER II (Bio-Rad Laboratories). After transfection, the cells expressing neomycin-resistant gene were selected by cultivation in medium containing G418 (0.6 mg/ ml) and rmIL-3 for 4 weeks. Cloning of the cells was done with the limiting-dilution method, and the expression of each mutated c-kit was confirmed by flow cytometry, protein immunoblotting, and RT-PCR with sequencing.
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38
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15644379910
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note
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To quantitate cell proliferation, we used the MTT [3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide] (Sigma) rapid colorimetric assay. The procedure was done as in (6).
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39
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15644371374
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note
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2, where a and b are the length and width in millimeters of the tumor mass, respectively.
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40
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H. Kitayama et al., Blood 85, 790 (1995).
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Ashman, L.K.1
Cambareri, A.C.2
To, L.B.3
Levinsky, R.J.4
Juttner, C.A.5
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0026352129
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L. K. Ashman, A. C. Cambareri, L. B. To, R. J. Levinsky, C. A. Juttner, ibid. 78, 30 (1991); J. P. Catlett, J. A. Leftwich, E. H. Westin, S. Grant, T. F. Huff, ibid., p. 3186.
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Catlett, J.P.1
Leftwich, J.A.2
Westin, E.H.3
Grant, S.4
Huff, T.F.5
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45
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15644372292
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note
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We thank A. Fukuyama and K. Morihana for preparing histological sections. Supported by grants from the Japanese Ministry of Education, Science, Culture, and Sports.
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