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0029008367
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Nonpeptidic Inhibitors of Human Leukocyte Elastase. 5. Design, Synthesis and X-ray Crystallography of a Series of Orally Active 5-Aminopyrimidin-6-one-Containing Trifluoromethyl Ketones
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20
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0028227585
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Substituted 3-Oxo-1,2,5- Thiadiazolidine 1,1-Dioxides: A New Class of Potential Mechanism-Based Inhibitors of Human Leukocyte Elastase and Cathepsin G
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1,3-Oxazino[4,5-6]indole-2,4-(1H,9H)-diones and 5,6-Dimethylpyrrolo[2,3-d]-1,3-Oxazin-2,4-(1H,7H)-diones as Serine Protease Inhibitors
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24
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85068948961
-
-
note
-
2I) by GC-MS. Best results were obtained when perfluoroalkyl iodides of purity 98% or greater were employed. In the case of the batches with <90% purity by GC, we increased the amount used by 3-fold to compensate (use of 9 equiv or greater).
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-
-
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25
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33646825288
-
Protected Lactam-Bridged Dipeptides for use as Conformational Constraints in Peptides
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Freidinger, R. M.; Perlow, D. S.; Veber, D. F. Protected Lactam-Bridged Dipeptides for use as Conformational Constraints in Peptides. J. Org. Chem. 1982, 47, 104-109.
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26
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0025064155
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The Inhibition of Human Neutrophil Elastase and Cathepsin G by Peptidyl 1,2-Dicarbonyl Derivatives
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Mehdi, S.; Angelastro, M. R.; Burkhart, J. P.; Koehl, J. R.; Peet, N. P.; Bey, P. The Inhibition of Human Neutrophil Elastase and Cathepsin G by Peptidyl 1,2-Dicarbonyl Derivatives. Biochem. Biophys. Res. Commun. 1990, 166, 595-600.
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Mehdi, S.1
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Bey, P.6
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27
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0028569229
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G-Val-Pro-Val Pentafluoro-ethyl Ketones
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G-Val-Pro-Val Pentafluoro-ethyl Ketones. J. Med. Chem. 1994, 37, 4538-4554.
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Angelastro, M.R.1
Baugh, L.E.2
Bey, P.3
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Marquait, A.L.11
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28
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0025343238
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1-Proteinase Inhibitor Methoxysuccinyl-Ala-Ala-Pro-Val-Chloromethyl ketone and Specific β-Lactam Inhibitors in an Acute Model of Human Polymorphonuclear Leukocyte Elastase-Induced Lung Hemorrhage in the Hamster
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1-Proteinase Inhibitor Methoxysuccinyl-Ala-Ala-Pro-Val-Chloromethyl ketone and Specific β-Lactam Inhibitors in an Acute Model of Human Polymorphonuclear Leukocyte Elastase-Induced Lung Hemorrhage in the Hamster. Am. Rev. Respir. Dis. 1990, 141, 672-677.
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29
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0026587636
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Biochemical and Pharmacological Activities of SR 26831, a Potent and Selective Elastase Inhibitor
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30
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19244369731
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Orally Active β-Lactam Inhibitors of Human Leukocyte Elaataae-1. Activity of 3,3-Diethyl-2-Azetidinones
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(d) Shah, S. K.; Dorn, C. P.; Finke, P. E.; Hale, J. J.; Hagmann, W. K.; Brause, K. A.; Chandler, G. O.; Kissinger, A. L.; Dellea, P. S.; Fletcher, D. S.; Hand, K. M.; Mumford, R. A.; Underwood, D. J.; Doherty, J. B. Orally Active β-Lactam Inhibitors of Human Leukocyte Elaataae-1. Activity of 3,3-Diethyl-2-Azetidinones. J. Med. Chem. 1992, 35, 3745-3754.
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Shah, S.K.1
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Fletcher, D.S.10
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31
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0026600147
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Inhibition of Human Leukocyte Elastase (HLE) by N-Substituted Peptidyl Trifluoromethyl Ketones
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(e) Skiles, J. W.; Fuchs, V.; Miao, C.; Sorek, R.; Grozinger, K. G.; Mauldin, S. C.; Vitous, J.; Mui, P. W.; Jacober, S.; Chow, G.; Matteo, M.; Skoog, M.; Weldon, S. M.; Possanza, G.; Keirns, J.; Letts, G.; Rosenthal, A. S. Inhibition of Human Leukocyte Elastase (HLE) by N-Substituted Peptidyl Trifluoromethyl Ketones. J. Med. Chem. 1992, 35, 641-662.
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33
-
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85068948496
-
-
note
-
The term mechanism-based has often been used to describe specific inhibitors which are irreversible suicide inactivators of enzymes. Here it is used in a more general context to define inhibitors whose mode of action is based on the mechanism of enzymatic substrate hydrolysis and which inactivate an enzyme by interacting with the catalytic residues within the active site.
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-
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34
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0002451901
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Structure of Human Neutrophil Elastase in Complex with a Peptide Chloromethyl Ketone Inhibitor at 1.84-Å Resolution
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(a) Skiles, J. W.; Fuchs, V.; Miao, C.; Sorcek, R.; Grozinger, K. G.; Maulgin, S. C.; Vitous, J.; Mui, P. W.; Jacober, S.; Chow, G.; Matteo, M.; Skoog, M.; Weldon, S. M.; Possanza, G.; Keirns, J.; Letts, G.; Rosenthal, A. S. Inhibition of Human Leukocyte Elastase (HLE) by N-Substituted Peptidyl Trifluoromethyl Ketones. J. Med. Chem. 1992, 35, 641-662.
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Mui, P.W.8
Jacober, S.9
Chow, G.10
Matteo, M.11
Skoog, M.12
Weldon, S.M.13
Possanza, G.14
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(b) Brown, F. J.; Andisik, D. W.; Bernstein, P. R.; Bryant, C. B.; Ceccarelli, C.; Damewood, J. R., Jr.; Edwards, P. D.; Earley, R. A.; Feeney, S.; Green, R. C.; Gomes, B.; Kosmider, B. J.; Krell, R. D.; Shaw, A.; Steelman, G. B.; Thomas, R. M.; Vacek, E. P.; Veale, C. A.; Tuthill, P. A.; Warner, P.; Williams, J. C.; Wolanin, D. J.; Woolson, S. A. Design of Orally Active, Non-Peptidic Inhibitors of Human Leukocyte Elastase. J. Med. Chem. 1994, 37, 1259-1261.
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Brown, F.J.1
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Ceccarelli, C.5
Damewood Jr., J.R.6
Edwards, P.D.7
Earley, R.A.8
Feeney, S.9
Green, R.C.10
Gomes, B.11
Kosmider, B.J.12
Krell, R.D.13
Shaw, A.14
Steelman, G.B.15
Thomas, R.M.16
Vacek, E.P.17
Veale, C.A.18
Tuthill, P.A.19
Warner, P.20
Williams, J.C.21
Wolanin, D.J.22
Woolson, S.A.23
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(c) Bernsein, P. R.; Andisik, D.; Bradley, P. K.; Bryant, C. B.; Ceccarelli, C.; Damewood, J. R.; Earley, R.; Edwards, P. D.; Fenney, S.; Gomes, B. C.; Kosmider, B. J.; Steelman, G. B.; Thomas, R. M.; Vacek, E. P.; Veale, C. A.; Williams, J. C.; Wolanin, D. J.; Woolson, S. A. Nonpeptidic Inhibitors of Human Leukocyte Elastase. 3. Design, Synthesis, X-ray Crystallographic Analysis, and Structure-Activity Relationships for a Series of Orally Active 3-Amino-6-phenylpyridin-2-one Trifluoromethyl Ketones. J. Med. Chem. 1994, 37, 3313-3326.
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Earley, R.7
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Fenney, S.9
Gomes, B.C.10
Kosmider, B.J.11
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Vacek, E.P.14
Veale, C.A.15
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Private communication with D. Ringe.
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Brown, F. J.; Andisik, D. W.; Bernstein, P. R.; Bryant, C. B.; Ceccarelli, C.; Damewood, J. R., Jr.; Edwards, P. D.; Earley, R. A.; Feeney, S.; Green, R. C.; Gomes, B.; Kosmider, B. J.; Krell, R. D.; Shaw, A.; Steelman, G. B.; Thomas, R. M.; Vacek, E. P.; Veale, C. A.; Tuthill, P. A.; Warner, P.; Williams, J. C.; Wolanin, D. J.; Woolson, S. A. Design of Orally Active, Non-Peptidic Inhibitors of Human Leukocyte Elastase. J. Med. Chem. 1994, 37, 1259-1261.
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Bernstein, P.R.3
Bryant, C.B.4
Ceccarelli, C.5
Damewood Jr., J.R.6
Edwards, P.D.7
Earley, R.A.8
Feeney, S.9
Green, R.C.10
Gomes, B.11
Kosmider, B.J.12
Krell, R.D.13
Shaw, A.14
Steelman, G.B.15
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Veale, C.A.18
Tuthill, P.A.19
Warner, P.20
Williams, J.C.21
Wolanin, D.J.22
Woolson, S.A.23
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50
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85068946240
-
-
note
-
The protein solution was prepared with the following concentrations: 13 mg/mL PPE obtained from Serva, 9.3 mM sodium acetate (pH 5.0), 22.4 mM sodium sulfate, and 2.2 mM MDL 103,139 (4.8 μL of a 50 mM solution of MDL 103,139 in DMF was added to 102.4 μL of protein solution). Crystallization was performed using a sitting drop setup with drops of 25 μL of protein solution. To prevent evaporation of the drops, 500 mL of 10 mM sodium acetate (pH 5.0) with 20 mM sodium sulfate was added to the reservoir. Crystals appeared within 1 week.
-
-
-
-
51
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0023875174
-
X-ray Diffraction Analysis of the Inhibition of Porcine Pancreatic Elastase by a Peptidyl Trifluoromethyl Ketone
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(a) Takahashi, L. H.; Radhakrishnan, R.; Rosenfield, R. E., Jr.; Meyer, E. F., Jr.; Trainor, D. A.; Stien, M. X-ray Diffraction Analysis of the Inhibition of Porcine Pancreatic Elastase by a Peptidyl Trifluoromethyl Ketone. J. Mol. Biol. 1988, 201, 423-428.
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Takahashi, L.H.1
Radhakrishnan, R.2
Rosenfield Jr., R.E.3
Meyer Jr., E.F.4
Trainor, D.A.5
Stien, M.6
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52
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0024519247
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Crystal Structure of the Covalent Complex Formed by a Peptidyl α,α-Difluoro-β-Keto Amide with Porcine Pancreatic Elastase at 1.78-Å Resolution
-
(b) Takahashi, L. H.; Radhakrishnan, R.; Rosenfield, R. E., Jr.; Meyer, E. F., Jr.; Trainor, D. A. Crystal Structure of the Covalent Complex Formed by a Peptidyl α,α-Difluoro-β-Keto Amide with Porcine Pancreatic Elastase at 1.78-Å Resolution. J. Am. Chem. Soc. 1989, 111, 3368-3374.
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Meyer Jr., E.F.4
Trainor, D.A.5
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53
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85046526624
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Kabsch, W. Evaluation of Single-Crystal X-ray Diffraction Data from a Position Sensitive Detector. J. Appl. Crystallogr. 1988, 21, 916-924.
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, pp. 916-924
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Kabsch, W.1
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55
-
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85068948301
-
-
note
-
A protein solution was prepared by dissolving HNE from human sputum (Elastin Products, Owensville, MO) to ȧ concentration of 25 mg/mL in a solution of 2 mM MDL 103,542 in water with 4% (v/v) DMF. The reservoir solution was prepared from stock solutions of 3.0 M ammonium phosphate (pH 3.8) and 1.0 M TrisHCl (pH 8.0) to a final concentration of 1.5 M ammonium phosphate and 0.1 M Tris; 4 μL of protein solution was mixed with 1 μL of reservoir solution and set to equilibrate at 4°C above 1 mL of reservoir solution. After mixing, the pH of the drop was 5.2. A large number of small intergrown crystals appeared after 1 week. However, analysis of these crystals showed that they were not suitable for X-ray analysis, and they were dissolved by adding 2 × 5 μL of water to the drop; 72 h after the water addition, a small crystal, grown under similar conditions, was transferred to the drop, to act as a seed. The length of the seed increased in 1 week from 0.2 to 1.25 mm and was used for X-ray analysis.
-
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56
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84920325457
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AMoRe: An Automated Package for Molecular Replacement
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Navaza, J. AMoRe: An Automated Package for Molecular Replacement. Acta Crystattogr. 1994, A50, 157-163.
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Navaza, J.1
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Structure and Energetics of Ligand Binding to Proteins: E. Coli Dihydrofolate Reductase-Trimethoprim, a Drug-Receptor System
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Dauber-Osguthorpe, P.; Roberts, V. A.; Osguthorpe, D. J.; Wolff, J.; Genest, M.; Hagler, A. T. Structure and Energetics of Ligand Binding to Proteins: E. Coli Dihydrofolate Reductase-Trimethoprim, a Drug-Receptor System. Proteins: Struct. Funct. Genet. 1988, 4, 31-47.
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Dauber-Osguthorpe, P.1
Roberts, V.A.2
Osguthorpe, D.J.3
Wolff, J.4
Genest, M.5
Hagler, A.T.6
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58
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85068950205
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Biosym Technologies, 9685 Scranton Rd, San Diego, CA 92121-2777
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Discover, version 2.9, 1993; Biosym Technologies, 9685 Scranton Rd, San Diego, CA 92121-2777.
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59
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0000051486
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Derivation of Force Fields for Molecular Mechanics and Dynamics from Ab Initio Energy Surfaces
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Maple, J. R.; Dinur, U.; Hagler, A. T. Derivation of Force Fields for Molecular Mechanics and Dynamics from Ab Initio Energy Surfaces. Proc, Natl. Acad. Sci. U.S.A. 1988, 85, 5350-5354.
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0842341771
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AM1: A New General Purpose Quantum Mechanical Molecular Model
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Dewar, M. J. S.; Zoebisch, E. G.; Healy, E. F.; Stewart, J. J. P. AM1: A New General Purpose Quantum Mechanical Molecular Model. J. Am. Chem. Soc. 1985, 107, 3902-3909.
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0003716563
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QCPE 455, Quantum Chemistry Program Exchange, Bloomington, IN 47405
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Stewart, J. P. P. MOPAC: A general molecular orbital package, version 6.0. QCPE 455, Quantum Chemistry Program Exchange, Bloomington, IN 47405.
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MOPAC: A General Molecular Orbital Package, Version 6.0
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Stewart, J.P.P.1
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85068949295
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Grid scans of 10° were carried out followed by BFGS geometry optimization using convergence criteria set using the PRECISE keyword
-
Grid scans of 10° were carried out followed by BFGS geometry optimization using convergence criteria set using the PRECISE keyword.
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63
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0027609478
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Relationships between Ring Substitution, Chair Conformation in Solution and Polymer Properties in Aramids
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Irwin, R. S.; Vorpagel, E. R. Relationships Between Ring Substitution, Chair Conformation in Solution and Polymer Properties in Aramids. Macromolecules 1993, 26, 3391-3402.
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Other staining solutions, when mentioned, were prepared as described in: Thin -Layer Chromatography, a Laboratory Handbook; Stahl, E., Ed.; Springer-Verlag: Berlin-Heidelberg-New York, 1969.
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Prepared by Robert V. Hoffman and H.-O. Kim, New Mexico State University, Las Cruces, NM
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Prepared by Robert V. Hoffman and H.-O. Kim, New Mexico State University, Las Cruces, NM.
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Schmidt, U.; Öhler, E. Facile Synthesis of α,β-Dehydro Amino Acid Esters. Angew. Chem., Int. Ed. Engl. 1977, 16, 327-328.
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|