-
1
-
-
0002738351
-
Evidence for and implications of genetic hitchhiking in the Drosophila genome
-
N. Takahata and A. G. Clark, eds. Sinauer Associates, Sunderland. Mass.
-
Aquadro, C. F., and D. J. Begun. 1993. Evidence for and implications of genetic hitchhiking in the Drosophila genome. Pp 159-178 in N. Takahata and A. G. Clark, eds. Mechanism of molecular evolution. Sinauer Associates, Sunderland. Mass.
-
(1993)
Mechanism of Molecular Evolution
, pp. 159-178
-
-
Aquadro, C.F.1
Begun, D.J.2
-
2
-
-
0030986188
-
The hardwiring of development: Organization and function of genomic regulatory systems
-
Amone, M. I., and E. H. Davidson. 1997. The hardwiring of development: organization and function of genomic regulatory systems. Development 124:1851-1864.
-
(1997)
Development
, vol.124
, pp. 1851-1864
-
-
Amone, M.I.1
Davidson, E.H.2
-
3
-
-
0003455528
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Ashbumer, M. 1989. Drosophila: a laboratory handbook. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Drosophila: A Laboratory Handbook
-
-
Ashbumer, M.1
-
4
-
-
0030878666
-
Crustacean appendage evolution associated with changes in Hox gene expression
-
Averof, M., and N. H. Patel. 1997. Crustacean appendage evolution associated with changes in Hox gene expression. Nature 388:682-686.
-
(1997)
Nature
, vol.388
, pp. 682-686
-
-
Averof, M.1
Patel, N.H.2
-
5
-
-
0026529344
-
Levels of naturally occurring DNA polymorphism correlate with recombination rate in D. melanogaster
-
Begun, D. J., and C. F. Aquadro. 1992. Levels of naturally occurring DNA polymorphism correlate with recombination rate in D. melanogaster. Nature 356:519-520.
-
(1992)
Nature
, vol.356
, pp. 519-520
-
-
Begun, D.J.1
Aquadro, C.F.2
-
6
-
-
0024292609
-
Differential regulation of Ultrabithorax in two germ layers of Drosophila
-
Bienz, M., G. Saari, G. Tremml, C. Muller, J. Zust, and P. A. Lawrence. 1988. Differential regulation of Ultrabithorax in two germ layers of Drosophila. Cell 53:567-576.
-
(1988)
Cell
, vol.53
, pp. 567-576
-
-
Bienz, M.1
Saari, G.2
Tremml, G.3
Muller, C.4
Zust, J.5
Lawrence, P.A.6
-
7
-
-
0028205863
-
Evolutionary conservation of the structure and expression of alternatively spliced Ultrabithorax isoforms from Drosophila
-
Bomze, H. M., and A. J. López. 1994. Evolutionary conservation of the structure and expression of alternatively spliced Ultrabithorax isoforms from Drosophila. Genetics 136:965-977.
-
(1994)
Genetics
, vol.136
, pp. 965-977
-
-
Bomze, H.M.1
López, A.J.2
-
8
-
-
0017418988
-
Developmental effects of exposing Drosophila embryos to ether vapour
-
Bownes, M., and M. Seiler. 1977. Developmental effects of exposing Drosophila embryos to ether vapour. J. Exp. Zool. 199:9-24.
-
(1977)
J. Exp. Zool.
, vol.199
, pp. 9-24
-
-
Bownes, M.1
Seiler, M.2
-
9
-
-
0028348142
-
Neutralism and selectionism face up to DNA data
-
Brookfield, J. F. Y., and P. M. Sharp. 1994. Neutralism and selectionism face up to DNA data. Trends Genet 10:109-111.
-
(1994)
Trends Genet.
, vol.10
, pp. 109-111
-
-
Brookfield, J.F.Y.1
Sharp, P.M.2
-
11
-
-
0029047269
-
Discrete polycomb-binding sites in each parasegmental domain of the bithorax complex
-
Chiang, A., M. B. O'Connor, R. Paro, J. Simon, and W. Bender. 1995. Discrete polycomb-binding sites in each parasegmental domain of the bithorax complex. Development 121:1681-1689.
-
(1995)
Development
, vol.121
, pp. 1681-1689
-
-
Chiang, A.1
O'Connor, M.B.2
Paro, R.3
Simon, J.4
Bender, W.5
-
12
-
-
0036005791
-
Extensive conservation of sequences and chromatin structures in the bxd Polycomb response element among Drosophilid species
-
Dellino, G. I., C. Tatout, and V. Pirrotta. 2002. Extensive conservation of sequences and chromatin structures in the bxd Polycomb response element among Drosophilid species. Int. J. Dev. Biol. 46:133-141.
-
(2002)
Int. J. Dev. Biol.
, vol.46
, pp. 133-141
-
-
Dellino, G.I.1
Tatout, C.2
Pirrotta, V.3
-
13
-
-
0027453041
-
Statistical tests of neutrality of mutations
-
Fu, Y. X., and W. H. Li. 1993. Statistical tests of neutrality of mutations. Genetics 133:693-709.
-
(1993)
Genetics
, vol.133
, pp. 693-709
-
-
Fu, Y.X.1
Li, W.H.2
-
14
-
-
0030049153
-
Effect of polymorphism in the Drosophila regulatory gene Ultrabithorax on homeotic stability
-
Gibson, G., and D. S. Hogness. 1996. Effect of polymorphism in the Drosophila regulatory gene Ultrabithorax on homeotic stability. Science 271:200-203.
-
(1996)
Science
, vol.271
, pp. 200-203
-
-
Gibson, G.1
Hogness, D.S.2
-
15
-
-
0033053625
-
Potential variance affecting homeotic Ultrabithorax and Antennapedia phenotypes in Drosophila melanogaster
-
Gibson, G., M. Wemple, and S. Van Helden. 1999. Potential variance affecting homeotic Ultrabithorax and Antennapedia phenotypes in Drosophila melanogaster. Genetics 151:1081-1091.
-
(1999)
Genetics
, vol.151
, pp. 1081-1091
-
-
Gibson, G.1
Wemple, M.2
Van Helden, S.3
-
16
-
-
0024234855
-
Clustal: A package for performing multiple sequence alignment on a microcomputer
-
Higgins, D. G., and P. M. Sharp. 1988. Clustal: a package for performing multiple sequence alignment on a microcomputer. Gene 73:237-244.
-
(1988)
Gene
, vol.73
, pp. 237-244
-
-
Higgins, D.G.1
Sharp, P.M.2
-
17
-
-
0020566662
-
Bithorax phenocopy and pattern formation: I. Spatiotemporal characteristics of the phenocopy response
-
Ho, M. W., E. Bolton, and P. T. Saunders. 1983. Bithorax phenocopy and pattern formation: I. Spatiotemporal characteristics of the phenocopy response. Exp. Cell Biol. 51:282-290.
-
(1983)
Exp. Cell Biol.
, vol.51
, pp. 282-290
-
-
Ho, M.W.1
Bolton, E.2
Saunders, P.T.3
-
18
-
-
0025979547
-
The large upstream control region of the Drosophila homeotic gene Ultrabithorax
-
Irvine, K. D., S. L. Helfand, and D. S. Hogness. 1991. The large upstream control region of the Drosophila homeotic gene Ultrabithorax. Development 111:407-424.
-
(1991)
Development
, vol.111
, pp. 407-424
-
-
Irvine, K.D.1
Helfand, S.L.2
Hogness, D.S.3
-
20
-
-
0024743233
-
Evolutionary conservation of homeodomain-binding sites and other sequences upstream and within the major transcription unit of the Drosophila segmentation gene engrailed
-
Kassis, J. A., C. Desplan, D. K. Wright, and P. H. O'Farrell. 1989. Evolutionary conservation of homeodomain-binding sites and other sequences upstream and within the major transcription unit of the Drosophila segmentation gene engrailed. Mol. Cell. Biol. 9:4304-4311.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 4304-4311
-
-
Kassis, J.A.1
Desplan, C.2
Wright, D.K.3
O'Farrell, P.H.4
-
21
-
-
0023054157
-
Sequence conservation in the protein coding and intron regions of the engrailed transcription unit
-
Kassis, J. A., S. J. Poole, D. K. Wright, and P. H. O'Farrell. 1986. Sequence conservation in the protein coding and intron regions of the engrailed transcription unit. EMBO J. 5:3583-3589.
-
(1986)
EMBO J.
, vol.5
, pp. 3583-3589
-
-
Kassis, J.A.1
Poole, S.J.2
Wright, D.K.3
O'Farrell, P.H.4
-
22
-
-
0035881655
-
Macro-evolution of the hairy enhancer in Drosophila species
-
Kim, J. 2001. Macro-evolution of the hairy enhancer in Drosophila species. J. Exp. Zool. (Mol. Dev. Evol.) 291:175-185.
-
(2001)
J. Exp. Zool. (Mol. Dev. Evol.)
, vol.291
, pp. 175-185
-
-
Kim, J.1
-
23
-
-
0027414665
-
Conservation of regulatory elements controlling hairy pair-rule stripe formation
-
Langeland, J. A., and S. B. Carroll. 1993. Conservation of regulatory elements controlling hairy pair-rule stripe formation. Development 117:585-596.
-
(1993)
Development
, vol.117
, pp. 585-596
-
-
Langeland, J.A.1
Carroll, S.B.2
-
24
-
-
0018240421
-
A gene complex controlling segmentation in Drosophila
-
Lewis, E. B. 1978. A gene complex controlling segmentation in Drosophila. Nature 276:565-570.
-
(1978)
Nature
, vol.276
, pp. 565-570
-
-
Lewis, E.B.1
-
25
-
-
0034598832
-
Evidence for stabilizing selection in a eukaryotic enhancer element
-
Ludwig, M. Z., C. Bergman, N. H. Patel, and M. Kreitman. 2000. Evidence for stabilizing selection in a eukaryotic enhancer element. Nature 403:564-567.
-
(2000)
Nature
, vol.403
, pp. 564-567
-
-
Ludwig, M.Z.1
Bergman, C.2
Patel, N.H.3
Kreitman, M.4
-
26
-
-
0031889035
-
Functional analysis of eve stripe 2 enhancer evolution in Drosophila: Rules governing conservation and change
-
Ludwig, M. Z., N. H. Patel, and M. Kreitman. 1998. Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change. Development 125:949-958.
-
(1998)
Development
, vol.125
, pp. 949-958
-
-
Ludwig, M.Z.1
Patel, N.H.2
Kreitman, M.3
-
27
-
-
0028088884
-
Regulatory and coding regions of the segmentation gene hunchback are functionally conserved between Drosophila virilis and Drosophila melanogaster
-
Lukowicz, W., C. Schröder, G. Glaser, M. Hülskamp, and D. Tautz. 1994. Regulatory and coding regions of the segmentation gene hunchback are functionally conserved between Drosophila virilis and Drosophila melanogaster. Mech. Dev. 45:105-115.
-
(1994)
Mech. Dev.
, vol.45
, pp. 105-115
-
-
Lukowicz, W.1
Schröder, C.2
Glaser, G.3
Hülskamp, M.4
Tautz, D.5
-
28
-
-
0025093897
-
Regulation of the segmentation gene fushi tarazu has been functionally conserved in Drosophila
-
Maier, D., A. Preiss, and J. R. Powell. 1990. Regulation of the segmentation gene fushi tarazu has been functionally conserved in Drosophila. EMBO J. 9:3957-3966.
-
(1990)
EMBO J.
, vol.9
, pp. 3957-3966
-
-
Maier, D.1
Preiss, A.2
Powell, J.R.3
-
29
-
-
0026428610
-
Adaptive protein evolution at the Adh locus in Drosophila
-
McDonald, J. H., and M. Kreitman. 1991. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351:652-654.
-
(1991)
Nature
, vol.351
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
30
-
-
0030034357
-
Intraspecific nuclear DNA variation in Drosophila
-
Moriyama, E. N., and J. R. Powell. 1996. Intraspecific nuclear DNA variation in Drosophila. Mol. Biol. Evol. 13:261-277.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 261-277
-
-
Moriyama, E.N.1
Powell, J.R.2
-
31
-
-
0026671557
-
Sharp anterior boundary of homeotic gene expression conferred by the fushi tarazu protein
-
Müller, J., and M. Bienz. 1992. Sharp anterior boundary of homeotic gene expression conferred by the fushi tarazu protein. EMBO J. 11:3653-3661.
-
(1992)
EMBO J.
, vol.11
, pp. 3653-3661
-
-
Müller, J.1
Bienz, M.2
-
32
-
-
0023984847
-
Optimal alignment in linear space
-
Myers, E. W., and W. Miller. 1988. Optimal alignment in linear space. Comp. Appl. Bios. 4:11-17.
-
(1988)
Comp. Appl. Bios.
, vol.4
, pp. 11-17
-
-
Myers, E.W.1
Miller, W.2
-
33
-
-
0030203863
-
TreeView: An application to display phylogenetic trees on personal computers
-
Page, R. D. M. 1996. TreeView: an application to display phylogenetic trees on personal computers. Comp. Appl. Bios. 12:357-358.
-
(1996)
Comp. Appl. Bios.
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
34
-
-
0028268258
-
The bipartite D. melanogaster twist promoter is reorganized in D. virilis
-
Pan, D., S. A. Valentine, and A. J. Courey. 1994. The bipartite D. melanogaster twist promoter is reorganized in D. virilis. Mech. Dev. 46:41-53.
-
(1994)
Mech. Dev.
, vol.46
, pp. 41-53
-
-
Pan, D.1
Valentine, S.A.2
Courey, A.J.3
-
35
-
-
0028832844
-
Distinct parasegmental and imaginal enhancers and the establishment of the expression pattern of the Ubx gene
-
Pirrotta, V., C. S. Chan, D. McCabe, and S. Qian. 1995. Distinct parasegmental and imaginal enhancers and the establishment of the expression pattern of the Ubx gene. Genetics 141:1439-1450.
-
(1995)
Genetics
, vol.141
, pp. 1439-1450
-
-
Pirrotta, V.1
Chan, C.S.2
McCabe, D.3
Qian, S.4
-
36
-
-
0025736036
-
The bx region enhancer, a distinct cis-control element of the Drosophila Ubx gene and its regulation by hunchback and other segmentation genes
-
Qian, S., M. Capovilla, and V. Pirrotta. 1991. The bx region enhancer, a distinct cis-control element of the Drosophila Ubx gene and its regulation by hunchback and other segmentation genes. EMBO J. 10:1415-1425.
-
(1991)
EMBO J.
, vol.10
, pp. 1415-1425
-
-
Qian, S.1
Capovilla, M.2
Pirrotta, V.3
-
37
-
-
0027258138
-
Molecular mechanisms of pattern formation by the BRE enhancer of the Ubx gene
-
-. 1993. Molecular mechanisms of pattern formation by the BRE enhancer of the Ubx gene. EMBO J. 12:3865-3877.
-
(1993)
EMBO J.
, vol.12
, pp. 3865-3877
-
-
-
38
-
-
0028971143
-
MatInd and MatInspector: New fast and versatile tools for detection of consensus matches in nucleotide sequence data
-
Quandt, K., K. Frech, H. Karas, E. Wingender, and T. Wemer. 1995. MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res. 23:4878-4884.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4878-4884
-
-
Quandt, K.1
Frech, K.2
Karas, H.3
Wingender, E.4
Wemer, T.5
-
39
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas, J., and R. Rozas. 1999. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175.
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
40
-
-
0029009784
-
Patterns of conservation and divergence at the even-skipped locus of Drosophila
-
Sackerson, C. 1995. Patterns of conservation and divergence at the even-skipped locus of Drosophila. Mech. Dev. 51:199-215.
-
(1995)
Mech. Dev.
, vol.51
, pp. 199-215
-
-
Sackerson, C.1
-
41
-
-
0023375195
-
The Neighbor-Joining method - A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The Neighbor-Joining method - a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
42
-
-
0024591558
-
On the rate of DNA sequence evolution in Drosophila
-
Sharp, P. M., and W. H. Li. 1989. On the rate of DNA sequence evolution in Drosophila. J. Mol. Biol. 28:398-402.
-
(1989)
J. Mol. Biol.
, vol.28
, pp. 398-402
-
-
Sharp, P.M.1
Li, W.H.2
-
43
-
-
0025093313
-
Regulatory elements of the bithorax complex that control expression along the anterior-posterior axis
-
Simon, J., M. Peifer, W. Bender, and M. O'Connor. 1990. Regulatory elements of the bithorax complex that control expression along the anterior-posterior axis. EMBO J. 9:3945-3956.
-
(1990)
EMBO J.
, vol.9
, pp. 3945-3956
-
-
Simon, J.1
Peifer, M.2
Bender, W.3
O'Connor, M.4
-
44
-
-
0032480981
-
A role of Ultrabithorax in morphological differences between Drosophila species
-
Stem, D. L. 1998. A role of Ultrabithorax in morphological differences between Drosophila species. Nature 396:463-466.
-
(1998)
Nature
, vol.396
, pp. 463-466
-
-
Stem, D.L.1
-
45
-
-
0034251814
-
Evolutionary developmental biology and the problem of variation
-
-. 2000. Evolutionary developmental biology and the problem of variation. Evolution 54:1079-1091.
-
(2000)
Evolution
, vol.54
, pp. 1079-1091
-
-
-
46
-
-
0024313579
-
Statistical method of testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima, F. 1989. Statistical method of testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
47
-
-
0033858908
-
Evolution of transcriptional regulation
-
Tautz, D. 2000. Evolution of transcriptional regulation. Curr. Opin. Gen. Dev. 10:575-579.
-
(2000)
Curr. Opin. Gen. Dev.
, vol.10
, pp. 575-579
-
-
Tautz, D.1
-
48
-
-
0028990107
-
Molecular characterization of the zerknüllt region of the Antennapedia complex of D. subobscura
-
Terol, J., M. Perez-Alonso, and R. deFrutos. 1995. Molecular characterization of the zerknüllt region of the Antennapedia complex of D. subobscura. Chromosoma 103:613-624.
-
(1995)
Chromosoma
, vol.103
, pp. 613-624
-
-
Terol, J.1
Perez-Alonso, M.2
DeFrutos, R.3
-
49
-
-
0027968068
-
CLUSTAL-W-Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL-W-Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
50
-
-
0024342867
-
Comparison of the gap segmentation gene hunchback between Drosophila melanogaster and Drosophila virilis reveals novel modes of evolutionary change
-
Treier, M., C. Pfeifle, and D. Tautz. 1989. Comparison of the gap segmentation gene hunchback between Drosophila melanogaster and Drosophila virilis reveals novel modes of evolutionary change. EMBO J. 8:1517-1525.
-
(1989)
EMBO J.
, vol.8
, pp. 1517-1525
-
-
Treier, M.1
Pfeifle, C.2
Tautz, D.3
-
51
-
-
0028171848
-
Evolution of homeotic gene regulation and function in flies and butterflies
-
Warren, R. W., L. Nagy, J. Selegue, J. Gates, and S. B. Carroll. 1994. Evolution of homeotic gene regulation and function in flies and butterflies. Nature 372:458-461.
-
(1994)
Nature
, vol.372
, pp. 458-461
-
-
Warren, R.W.1
Nagy, L.2
Selegue, J.3
Gates, J.4
Carroll, S.B.5
-
52
-
-
0033545256
-
Ultrabithorax function in butterfly wings and the evolution of insect wing patterns
-
Weatherbee, S. D., H. F. Nijhout, L. W. Grunert, G. Halder, R. Galant, J. Selegue, and S. B. Carroll. 1999. Ultrabithorax function in butterfly wings and the evolution of insect wing patterns. Curr. Biol. 9:109-115.
-
(1999)
Curr. Biol.
, vol.9
, pp. 109-115
-
-
Weatherbee, S.D.1
Nijhout, H.F.2
Grunert, L.W.3
Halder, G.4
Galant, R.5
Selegue, J.6
Carroll, S.B.7
-
53
-
-
0001643743
-
Conserved sequence elements in the 5′ region of the Ultrabithorax transcription unit
-
Wilde, C. D., and M. E. Akam. 1987. Conserved sequence elements in the 5′ region of the Ultrabithorax transcription unit. EMBO J. 6:1393-1401.
-
(1987)
EMBO J.
, vol.6
, pp. 1393-1401
-
-
Wilde, C.D.1
Akam, M.E.2
-
54
-
-
0032903438
-
Structure and evolution of a pair-rule interaction element: Runt regulatory sequences in D. melanogaster and D. virilis
-
Wolff, C., M. Pepling, P. Gergen, and M. Klingler. 1999. Structure and evolution of a pair-rule interaction element: runt regulatory sequences in D. melanogaster and D. virilis. Mech. Dev. 80:87-99.
-
(1999)
Mech. Dev.
, vol.80
, pp. 87-99
-
-
Wolff, C.1
Pepling, M.2
Gergen, P.3
Klingler, M.4
|